DPPF_PSEAB
ID DPPF_PSEAB Reviewed; 323 AA.
AC A0A0H2ZH52;
DT 07-APR-2021, integrated into UniProtKB/Swiss-Prot.
DT 16-SEP-2015, sequence version 1.
DT 03-AUG-2022, entry version 26.
DE RecName: Full=Di/tripeptide transport ATP-binding protein DppF {ECO:0000305};
DE EC=7.4.2.9 {ECO:0000250|UniProtKB:P0AAG0};
GN Name=dppF {ECO:0000303|PubMed:25338022};
GN OrderedLocusNames=PA14_58490 {ECO:0000312|EMBL:ABJ13773.1};
OS Pseudomonas aeruginosa (strain UCBPP-PA14).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
OC Pseudomonadaceae; Pseudomonas.
OX NCBI_TaxID=208963;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=UCBPP-PA14;
RX PubMed=17038190; DOI=10.1186/gb-2006-7-10-r90;
RA Lee D.G., Urbach J.M., Wu G., Liberati N.T., Feinbaum R.L., Miyata S.,
RA Diggins L.T., He J., Saucier M., Deziel E., Friedman L., Li L., Grills G.,
RA Montgomery K., Kucherlapati R., Rahme L.G., Ausubel F.M.;
RT "Genomic analysis reveals that Pseudomonas aeruginosa virulence is
RT combinatorial.";
RL Genome Biol. 7:R90.1-R90.14(2006).
RN [2]
RP FUNCTION, SUBUNIT, AND DISRUPTION PHENOTYPE.
RC STRAIN=UCBPP-PA14;
RX PubMed=25338022; DOI=10.1371/journal.pone.0111311;
RA Pletzer D., Lafon C., Braun Y., Koehler T., Page M.G., Mourez M.,
RA Weingart H.;
RT "High-throughput screening of dipeptide utilization mediated by the ABC
RT transporter DppBCDF and its substrate-binding proteins DppA1-A5 in
RT Pseudomonas aeruginosa.";
RL PLoS ONE 9:e111311-e111311(2014).
CC -!- FUNCTION: Part of the ABC transporter DppABCDF involved in the uptake
CC of various di/tripeptides (PubMed:25338022). Is also involved in the
CC uptake of phaseolotoxin, a toxic tripeptide inhibiting the enzyme
CC ornithine carbamoyltransferase (PubMed:25338022). Responsible for
CC energy coupling to the transport system (Probable).
CC {ECO:0000269|PubMed:25338022, ECO:0000305}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a dipeptide(out) + ATP + H2O = a dipeptide(in) + ADP + H(+) +
CC phosphate; Xref=Rhea:RHEA:23120, ChEBI:CHEBI:15377,
CC ChEBI:CHEBI:15378, ChEBI:CHEBI:30616, ChEBI:CHEBI:43474,
CC ChEBI:CHEBI:90799, ChEBI:CHEBI:456216; EC=7.4.2.9;
CC Evidence={ECO:0000250|UniProtKB:P0AAG0};
CC -!- SUBUNIT: The complex is composed of two ATP-binding proteins (DppD and
CC DppF), two transmembrane proteins (DppB and DppC) and a solute-binding
CC protein (DppA1-A5) (PubMed:25338022). Five orthologous SBPs (DppA1-A5)
CC are present in P.aeruginosa, which increases the substrate specificity
CC of the DppBCDF transporter (PubMed:25338022).
CC {ECO:0000269|PubMed:25338022}.
CC -!- SUBCELLULAR LOCATION: Cell inner membrane {ECO:0000305}; Peripheral
CC membrane protein {ECO:0000305}.
CC -!- DISRUPTION PHENOTYPE: Deletion of the dppBCDF operon leads to reduced
CC ability to utilize di/tripeptides as nitrogen source.
CC {ECO:0000269|PubMed:25338022}.
CC -!- SIMILARITY: Belongs to the ABC transporter superfamily. {ECO:0000305}.
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DR EMBL; CP000438; ABJ13773.1; -; Genomic_DNA.
DR RefSeq; WP_003110330.1; NZ_CP034244.1.
DR AlphaFoldDB; A0A0H2ZH52; -.
DR SMR; A0A0H2ZH52; -.
DR EnsemblBacteria; ABJ13773; ABJ13773; PA14_58490.
DR KEGG; pau:PA14_58490; -.
DR HOGENOM; CLU_000604_1_23_6; -.
DR OMA; GRYPHMF; -.
DR BioCyc; PAER208963:G1G74-4925-MON; -.
DR Proteomes; UP000000653; Chromosome.
DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0015833; P:peptide transport; IEA:UniProtKB-KW.
DR GO; GO:0015031; P:protein transport; IEA:UniProtKB-KW.
DR Gene3D; 3.40.50.300; -; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR003439; ABC_transporter-like_ATP-bd.
DR InterPro; IPR017871; ABC_transporter-like_CS.
DR InterPro; IPR013563; Oligopep_ABC_C.
DR InterPro; IPR027417; P-loop_NTPase.
DR Pfam; PF00005; ABC_tran; 1.
DR Pfam; PF08352; oligo_HPY; 1.
DR SMART; SM00382; AAA; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
DR TIGRFAMs; TIGR01727; oligo_HPY; 1.
DR PROSITE; PS00211; ABC_TRANSPORTER_1; 1.
DR PROSITE; PS50893; ABC_TRANSPORTER_2; 1.
PE 1: Evidence at protein level;
KW ATP-binding; Cell inner membrane; Cell membrane; Membrane;
KW Nucleotide-binding; Peptide transport; Protein transport; Translocase;
KW Transport.
FT CHAIN 1..323
FT /note="Di/tripeptide transport ATP-binding protein DppF"
FT /id="PRO_0000452201"
FT DOMAIN 5..254
FT /note="ABC transporter"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00434"
FT BINDING 47..54
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00434"
SQ SEQUENCE 323 AA; 36363 MW; F33D8353012B0CD9 CRC64;
METVLTARDL TRHYEVSRGL FKGHAQVRAL NGVSFELEAG KTLAVVGESG CGKSTLARAL
TLIEEPTSGS LKIAGQEVKG ASKDQRRQLR RDVQMVFQNP YASLNPRQKI GDQLAEPLLI
NTALSREERR EKVQQMMRQV GLRPEHYQRY PHMFSGGQRQ RIALARAMML QPKVLVADEP
TSALDVSIQA QVLNLFMDLQ QQFRTAYVFI SHNLAVVRHV ADDVLVMYLG RPAEMGPADK
LYENPLHPYT RALLSATPAI HPDPTKPKIR IQGELPNPLH PPEGCAFHKR CPYATERCRS
EVPELRLLDQ RQVACHHAEQ FLG