DPY20_CAEBR
ID DPY20_CAEBR Reviewed; 439 AA.
AC P51558; A8X0X7; Q61SP5;
DT 01-OCT-1996, integrated into UniProtKB/Swiss-Prot.
DT 01-FEB-2005, sequence version 2.
DT 03-AUG-2022, entry version 91.
DE RecName: Full=Protein dumpy-20;
GN Name=dpy-20; ORFNames=CBG06089;
OS Caenorhabditis briggsae.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC Caenorhabditis.
OX NCBI_TaxID=6238;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AF16;
RX PubMed=14624247; DOI=10.1371/journal.pbio.0000045;
RA Stein L.D., Bao Z., Blasiar D., Blumenthal T., Brent M.R., Chen N.,
RA Chinwalla A., Clarke L., Clee C., Coghlan A., Coulson A., D'Eustachio P.,
RA Fitch D.H.A., Fulton L.A., Fulton R.E., Griffiths-Jones S., Harris T.W.,
RA Hillier L.W., Kamath R., Kuwabara P.E., Mardis E.R., Marra M.A.,
RA Miner T.L., Minx P., Mullikin J.C., Plumb R.W., Rogers J., Schein J.E.,
RA Sohrmann M., Spieth J., Stajich J.E., Wei C., Willey D., Wilson R.K.,
RA Durbin R.M., Waterston R.H.;
RT "The genome sequence of Caenorhabditis briggsae: a platform for comparative
RT genomics.";
RL PLoS Biol. 1:166-192(2003).
RN [2]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-22.
RX PubMed=7770042; DOI=10.1007/bf00293205;
RA Clark D.V., Suleman D.S., Beckenbach K.A., Gilchrist E.J., Baillie D.L.;
RT "Molecular cloning and characterization of the dpy-20 gene of
RT Caenorhabditis elegans.";
RL Mol. Gen. Genet. 247:367-378(1995).
CC -!- FUNCTION: Involved in cuticle function and is essential for normal
CC morphological development. {ECO:0000250}.
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DR EMBL; HE600986; CAP26287.1; -; Genomic_DNA.
DR RefSeq; XP_002633346.1; XM_002633300.1.
DR AlphaFoldDB; P51558; -.
DR STRING; 6238.CBG06089; -.
DR EnsemblMetazoa; CBG06089.1; CBG06089.1; WBGene00028421.
DR GeneID; 8575343; -.
DR KEGG; cbr:CBG_06089; -.
DR CTD; 8575343; -.
DR WormBase; CBG06089; CBP21693; WBGene00028421; Cbr-dpy-20.
DR eggNOG; ENOG502TGV1; Eukaryota.
DR HOGENOM; CLU_681947_0_0_1; -.
DR InParanoid; P51558; -.
DR OMA; MNDVGIR; -.
DR OrthoDB; 913874at2759; -.
DR Proteomes; UP000008549; Chromosome IV.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0042302; F:structural constituent of cuticle; IEA:UniProtKB-KW.
DR InterPro; IPR003656; Znf_BED.
DR InterPro; IPR036236; Znf_C2H2_sf.
DR Pfam; PF02892; zf-BED; 2.
DR SUPFAM; SSF57667; SSF57667; 2.
DR PROSITE; PS50808; ZF_BED; 2.
PE 3: Inferred from homology;
KW Cuticle; Metal-binding; Reference proteome; Repeat; Zinc; Zinc-finger.
FT CHAIN 1..439
FT /note="Protein dumpy-20"
FT /id="PRO_0000079994"
FT ZN_FING 135..184
FT /note="BED-type 1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00027"
FT ZN_FING 349..398
FT /note="BED-type 2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00027"
FT REGION 93..116
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT BINDING 154
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /ligand_label="1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00027"
FT BINDING 157
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /ligand_label="1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00027"
FT BINDING 172
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /ligand_label="1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00027"
FT BINDING 177
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /ligand_label="1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00027"
FT BINDING 368
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /ligand_label="2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00027"
FT BINDING 371
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /ligand_label="2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00027"
FT BINDING 386
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /ligand_label="2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00027"
FT BINDING 391
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /ligand_label="2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00027"
SQ SEQUENCE 439 AA; 49650 MW; 52551C14B2C020EE CRC64;
MDGHSNTSVI LHTYQQQQSQ LIPSIIPQTL PDGYGLTTTI SQPDFSGTNA FINTNPWNTT
TFPTYRDNQY TNEVSVLNYP TVYDDFSKES TAGTLSDPSL HGSNSSSSTS DVGSSVDCSI
SPEPILMPCV KRGRPTENPC WAYFHRIDDQ LVKCRLCTKV VRSACATNMT KHLERHHTDD
YQKVTGQLKL FRMNDAGIRS KMHYQVADTP LTPIPVLPNS YVLPKMDPME AFDASQYYTM
QPDSTAINAQ PFPQFDQPQT SADSQTWPLT HFWPNGAQNN MMPQLGEPST SAIGASVIQE
IRKLNLDSDQ KRLELEMDQN RRLLLAQKAD EKGRVVKTTT KPYQKRNRKT EHPVWAFFKR
TGDGNAECII CQGVVKSPCS SNFMRHLMRH HSTEYNDVYL KWIEKRNVTH PGIHCTSVPP
PISFPNKDNV RTEPIFTVK