DPY20_CAEEL
ID DPY20_CAEEL Reviewed; 440 AA.
AC P34807;
DT 01-FEB-1994, integrated into UniProtKB/Swiss-Prot.
DT 10-JUL-2007, sequence version 3.
DT 03-AUG-2022, entry version 112.
DE RecName: Full=Protein dumpy-20;
GN Name=dpy-20; ORFNames=T22B3.1;
OS Caenorhabditis elegans.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC Caenorhabditis.
OX NCBI_TaxID=6239;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Bristol N2;
RX PubMed=9851916; DOI=10.1126/science.282.5396.2012;
RG The C. elegans sequencing consortium;
RT "Genome sequence of the nematode C. elegans: a platform for investigating
RT biology.";
RL Science 282:2012-2018(1998).
RN [2]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-349, FUNCTION, AND DEVELOPMENTAL
RP STAGE.
RX PubMed=7770042; DOI=10.1007/bf00293205;
RA Clark D.V., Suleman D.S., Beckenbach K.A., Gilchrist E.J., Baillie D.L.;
RT "Molecular cloning and characterization of the dpy-20 gene of
RT Caenorhabditis elegans.";
RL Mol. Gen. Genet. 247:367-378(1995).
CC -!- FUNCTION: May be directly or indirectly involved in cuticle function.
CC {ECO:0000269|PubMed:7770042}.
CC -!- DEVELOPMENTAL STAGE: Expressed predominantly in the second larval
CC stage. {ECO:0000269|PubMed:7770042}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAA85278.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; Z68300; CAA92616.2; -; Genomic_DNA.
DR EMBL; U01918; AAA85278.1; ALT_SEQ; Genomic_DNA.
DR PIR; T25097; T25097.
DR RefSeq; NP_502215.2; NM_069814.4.
DR AlphaFoldDB; P34807; -.
DR STRING; 6239.T22B3.1; -.
DR PaxDb; P34807; -.
DR EnsemblMetazoa; T22B3.1.1; T22B3.1.1; WBGene00001079.
DR GeneID; 178105; -.
DR KEGG; cel:CELE_T22B3.1; -.
DR UCSC; T22B3.1; c. elegans.
DR CTD; 178105; -.
DR WormBase; T22B3.1; CE40520; WBGene00001079; dpy-20.
DR eggNOG; ENOG502TGV1; Eukaryota.
DR HOGENOM; CLU_681947_0_0_1; -.
DR InParanoid; P34807; -.
DR OMA; MNDVGIR; -.
DR OrthoDB; 913874at2759; -.
DR PRO; PR:P34807; -.
DR Proteomes; UP000001940; Chromosome IV.
DR Bgee; WBGene00001079; Expressed in larva.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:1990837; F:sequence-specific double-stranded DNA binding; HDA:WormBase.
DR InterPro; IPR003656; Znf_BED.
DR InterPro; IPR036236; Znf_C2H2_sf.
DR Pfam; PF02892; zf-BED; 2.
DR SUPFAM; SSF57667; SSF57667; 2.
DR PROSITE; PS50808; ZF_BED; 2.
PE 2: Evidence at transcript level;
KW Metal-binding; Reference proteome; Repeat; Zinc; Zinc-finger.
FT CHAIN 1..440
FT /note="Protein dumpy-20"
FT /id="PRO_0000079995"
FT ZN_FING 137..186
FT /note="BED-type 1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00027"
FT ZN_FING 350..399
FT /note="BED-type 2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00027"
FT REGION 96..119
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT BINDING 156
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /ligand_label="1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00027"
FT BINDING 159
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /ligand_label="1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00027"
FT BINDING 174
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /ligand_label="1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00027"
FT BINDING 179
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /ligand_label="1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00027"
FT BINDING 369
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /ligand_label="2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00027"
FT BINDING 372
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /ligand_label="2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00027"
FT BINDING 387
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /ligand_label="2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00027"
FT BINDING 392
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /ligand_label="2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00027"
SQ SEQUENCE 440 AA; 49834 MW; 99CB6E4DBEA34BC8 CRC64;
MEGHSNTSVI LHTYQQQQPQ QLISSIIPQT LSDGYGISAP ISQADCSGNS NFVNTNPWNN
TTFQAYQTDA QFTNEISVLN YPNVYDDFSK ESSNGILSDP SLHGSNSSSS TSDVGSSVDC
SISPEPILMP SVKRGRPTEN PCWAYFHRID DQLVKCRLCT KVVRSACATN MTKHLERHHA
DDYQKVTGQL KLFRMNDVGI RSKMHYEVAD NPLSTLPVVT NSYILPKMEP MDTFDPSQYY
GMQQDPTLNQ QQFIQFEQPQ ASIDPQTWPL THFWQNTAQT NIMSHLGEAS TSTLGSSVIQ
EAHKMNPDSN DKSFQLDLEQ QNCVIIEQKL DDKPRVTKPT TKPYQKRNRK TEHPVWAFFK
RTGDGNAECI ICQGVVKSPC SSNFMRHLMR HHSTEYNDVY LKWIEKRNIT HPGIHCTSVP
PPAFINNETS RTEQTTFSVK