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DRB3_ORYSJ
ID   DRB3_ORYSJ              Reviewed;         437 AA.
AC   Q0DJA3; A0A0P0WKE9;
DT   08-FEB-2011, integrated into UniProtKB/Swiss-Prot.
DT   17-OCT-2006, sequence version 1.
DT   03-AUG-2022, entry version 95.
DE   RecName: Full=Double-stranded RNA-binding protein 3;
DE   AltName: Full=dsRNA-binding protein 3;
GN   Name=DRB3; OrderedLocusNames=Os05g0307400, LOC_Os05g24160;
OS   Oryza sativa subsp. japonica (Rice).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX   NCBI_TaxID=39947;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=16100779; DOI=10.1038/nature03895;
RG   International rice genome sequencing project (IRGSP);
RT   "The map-based sequence of the rice genome.";
RL   Nature 436:793-800(2005).
RN   [2]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Nipponbare;
RX   PubMed=18089549; DOI=10.1093/nar/gkm978;
RG   The rice annotation project (RAP);
RT   "The rice annotation project database (RAP-DB): 2008 update.";
RL   Nucleic Acids Res. 36:D1028-D1033(2008).
RN   [3]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Nipponbare;
RX   PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA   Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA   Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA   Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA   Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT   "Improvement of the Oryza sativa Nipponbare reference genome using next
RT   generation sequence and optical map data.";
RL   Rice 6:4-4(2013).
RN   [4]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=12869764; DOI=10.1126/science.1081288;
RG   The rice full-length cDNA consortium;
RT   "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT   japonica rice.";
RL   Science 301:376-379(2003).
CC   -!- FUNCTION: Binds double-stranded RNA. {ECO:0000250}.
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DR   EMBL; AP008211; BAF17070.1; -; Genomic_DNA.
DR   EMBL; AP014961; BAS93274.1; -; Genomic_DNA.
DR   EMBL; AK072444; BAG92973.1; -; mRNA.
DR   RefSeq; XP_015640437.1; XM_015784951.1.
DR   AlphaFoldDB; Q0DJA3; -.
DR   SMR; Q0DJA3; -.
DR   STRING; 4530.OS05T0307400-01; -.
DR   iPTMnet; Q0DJA3; -.
DR   PaxDb; Q0DJA3; -.
DR   PRIDE; Q0DJA3; -.
DR   EnsemblPlants; Os05t0307400-01; Os05t0307400-01; Os05g0307400.
DR   GeneID; 4338371; -.
DR   Gramene; Os05t0307400-01; Os05t0307400-01; Os05g0307400.
DR   KEGG; osa:4338371; -.
DR   eggNOG; KOG1517; Eukaryota.
DR   HOGENOM; CLU_601863_0_0_1; -.
DR   InParanoid; Q0DJA3; -.
DR   OMA; CISPEAG; -.
DR   OrthoDB; 1344243at2759; -.
DR   Proteomes; UP000000763; Chromosome 5.
DR   Proteomes; UP000059680; Chromosome 5.
DR   Genevisible; Q0DJA3; OS.
DR   GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR   GO; GO:0003725; F:double-stranded RNA binding; IBA:GO_Central.
DR   GO; GO:0004525; F:ribonuclease III activity; IBA:GO_Central.
DR   GO; GO:0010468; P:regulation of gene expression; IBA:GO_Central.
DR   GO; GO:0006396; P:RNA processing; IBA:GO_Central.
DR   GO; GO:0006364; P:rRNA processing; IEA:InterPro.
DR   InterPro; IPR014720; dsRBD_dom.
DR   InterPro; IPR029347; Raptor_N.
DR   InterPro; IPR011907; RNase_III.
DR   PANTHER; PTHR11207; PTHR11207; 1.
DR   Pfam; PF00035; dsrm; 2.
DR   Pfam; PF14538; Raptor_N; 1.
DR   SMART; SM00358; DSRM; 2.
DR   SMART; SM01302; Raptor_N; 1.
DR   PROSITE; PS50137; DS_RBD; 2.
PE   2: Evidence at transcript level;
KW   Reference proteome; Repeat; RNA-binding.
FT   CHAIN           1..437
FT                   /note="Double-stranded RNA-binding protein 3"
FT                   /id="PRO_0000404680"
FT   DOMAIN          35..104
FT                   /note="DRBM 1"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00266"
FT   DOMAIN          120..187
FT                   /note="DRBM 2"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00266"
FT   REGION          1..22
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          288..331
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        288..328
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   437 AA;  47719 MW;  F3D6AE87D520CA80 CRC64;
     MKKKSAPTPL PPETANTSPA PIGATAGIRV ENCYVFKSRL QEYAQKAGLQ TPEYHTSKEG
     PSHEPVFKST VVINNTSYGS LPGFSNRKAA EQSAAEVALM EIVKSIPANA NIPAVQETGL
     CKNLLQEYAQ KMNYAIPSYI CTKPASGLAP FLCTVEIGGI QYIGAAARTK KDAEIKAART
     ALLAIQGQSE GSANGATKYI VVPGKRVGKE VEKRPIETPK PLKAKKGGFK KKWNKRKFMK
     KDGQAVDVEK DEARVAGDAH DSDVLMQPTV ITQEASCGTL FLQPCEEAKR VEDEPPRDIE
     MVQPDKENQH SDAALVQPDD EARVEQEPSR DISVVQPNEE AISAKQEPSI DAATLQPKEE
     AMKTGCVALV LCLNISVDPP DVIKISPCVR KECWIDPFSM AAPKALETIG KTLHSQYERW
     QPKARYKLQL DPTLEEV
 
 
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