位置:首页 > 蛋白库 > DRB6_ORYSJ
DRB6_ORYSJ
ID   DRB6_ORYSJ              Reviewed;         514 AA.
AC   Q9AV50; A0A0P0XVV3; Q7XDB1;
DT   08-FEB-2011, integrated into UniProtKB/Swiss-Prot.
DT   01-JUN-2001, sequence version 1.
DT   03-AUG-2022, entry version 116.
DE   RecName: Full=Double-stranded RNA-binding protein 6;
DE   AltName: Full=dsRNA-binding protein 5;
DE            Short=OsDRB5;
DE   AltName: Full=dsRNA-binding protein 6;
GN   Name=DRB6; Synonyms=DRB5; OrderedLocusNames=Os10g0480500, LOC_Os10g33970;
GN   ORFNames=OsJ_31914, OSJNBa0093B11.1;
OS   Oryza sativa subsp. japonica (Rice).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX   NCBI_TaxID=39947;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=12791992; DOI=10.1126/science.1083523;
RA   Yu Y., Rambo T., Currie J., Saski C., Kim H.-R., Collura K., Thompson S.,
RA   Simmons J., Yang T.-J., Nah G., Patel A.J., Thurmond S., Henry D.,
RA   Oates R., Palmer M., Pries G., Gibson J., Anderson H., Paradkar M.,
RA   Crane L., Dale J., Carver M.B., Wood T., Frisch D., Engler F.,
RA   Soderlund C., Palmer L.E., Teytelman L., Nascimento L., De la Bastide M.,
RA   Spiegel L., Ware D., O'Shaughnessy A., Dike S., Dedhia N., Preston R.,
RA   Huang E., Ferraro K., Kuit K., Miller B., Zutavern T., Katzenberger F.,
RA   Muller S., Balija V., Martienssen R.A., Stein L., Minx P., Johnson D.,
RA   Cordum H., Mardis E., Cheng Z., Jiang J., Wilson R., McCombie W.R.,
RA   Wing R.A., Yuan Q., Ouyang S., Liu J., Jones K.M., Gansberger K.,
RA   Moffat K., Hill J., Tsitrin T., Overton L., Bera J., Kim M., Jin S.,
RA   Tallon L., Ciecko A., Pai G., Van Aken S., Utterback T., Reidmuller S.,
RA   Bormann J., Feldblyum T., Hsiao J., Zismann V., Blunt S., de Vazeille A.R.,
RA   Shaffer T., Koo H., Suh B., Yang Q., Haas B., Peterson J., Pertea M.,
RA   Volfovsky N., Wortman J., White O., Salzberg S.L., Fraser C.M., Buell C.R.,
RA   Messing J., Song R., Fuks G., Llaca V., Kovchak S., Young S., Bowers J.E.,
RA   Paterson A.H., Johns M.A., Mao L., Pan H., Dean R.A.;
RT   "In-depth view of structure, activity, and evolution of rice chromosome
RT   10.";
RL   Science 300:1566-1569(2003).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=16100779; DOI=10.1038/nature03895;
RG   International rice genome sequencing project (IRGSP);
RT   "The map-based sequence of the rice genome.";
RL   Nature 436:793-800(2005).
RN   [3]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Nipponbare;
RX   PubMed=18089549; DOI=10.1093/nar/gkm978;
RG   The rice annotation project (RAP);
RT   "The rice annotation project database (RAP-DB): 2008 update.";
RL   Nucleic Acids Res. 36:D1028-D1033(2008).
RN   [4]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Nipponbare;
RX   PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA   Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA   Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA   Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA   Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT   "Improvement of the Oryza sativa Nipponbare reference genome using next
RT   generation sequence and optical map data.";
RL   Rice 6:4-4(2013).
RN   [5]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA   Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA   Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA   Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA   Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA   Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA   Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA   Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA   Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA   Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA   Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA   Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA   Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA   Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA   McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT   "The genomes of Oryza sativa: a history of duplications.";
RL   PLoS Biol. 3:266-281(2005).
RN   [6]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=12869764; DOI=10.1126/science.1081288;
RG   The rice full-length cDNA consortium;
RT   "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT   japonica rice.";
RL   Science 301:376-379(2003).
CC   -!- FUNCTION: Binds double-stranded RNA. {ECO:0000250}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; AC024594; AAK21352.1; -; Genomic_DNA.
DR   EMBL; DP000086; AAP54300.1; -; Genomic_DNA.
DR   EMBL; AP008216; BAF26788.1; -; Genomic_DNA.
DR   EMBL; AP014966; BAT11333.1; -; Genomic_DNA.
DR   EMBL; CM000147; EAZ16445.1; -; Genomic_DNA.
DR   EMBL; AK066524; BAG90011.1; -; mRNA.
DR   RefSeq; XP_015614779.1; XM_015759293.1.
DR   AlphaFoldDB; Q9AV50; -.
DR   SMR; Q9AV50; -.
DR   STRING; 4530.OS10T0480500-01; -.
DR   PaxDb; Q9AV50; -.
DR   PRIDE; Q9AV50; -.
DR   EnsemblPlants; Os10t0480500-01; Os10t0480500-01; Os10g0480500.
DR   GeneID; 4348920; -.
DR   Gramene; Os10t0480500-01; Os10t0480500-01; Os10g0480500.
DR   KEGG; osa:4348920; -.
DR   eggNOG; ENOG502QTBA; Eukaryota.
DR   HOGENOM; CLU_038996_1_0_1; -.
DR   InParanoid; Q9AV50; -.
DR   OMA; SMPEPEN; -.
DR   OrthoDB; 752697at2759; -.
DR   Proteomes; UP000000763; Chromosome 10.
DR   Proteomes; UP000007752; Chromosome 10.
DR   Proteomes; UP000059680; Chromosome 10.
DR   Genevisible; Q9AV50; OS.
DR   GO; GO:0005737; C:cytoplasm; IEA:EnsemblPlants.
DR   GO; GO:0003725; F:double-stranded RNA binding; IEA:EnsemblPlants.
DR   GO; GO:0035196; P:miRNA processing; IEA:EnsemblPlants.
DR   CDD; cd19907; DSRM_AtDRB-like_rpt1; 1.
DR   CDD; cd19908; DSRM_AtDRB-like_rpt2; 1.
DR   InterPro; IPR044450; AtDRB-like_DSRM_1.
DR   InterPro; IPR044451; AtDRB-like_DSRM_2.
DR   InterPro; IPR014720; dsRBD_dom.
DR   Pfam; PF00035; dsrm; 2.
DR   SMART; SM00358; DSRM; 2.
DR   PROSITE; PS50137; DS_RBD; 2.
PE   2: Evidence at transcript level;
KW   Reference proteome; Repeat; RNA-binding.
FT   CHAIN           1..514
FT                   /note="Double-stranded RNA-binding protein 6"
FT                   /id="PRO_0000404683"
FT   DOMAIN          1..70
FT                   /note="DRBM 1"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00266"
FT   DOMAIN          87..155
FT                   /note="DRBM 2"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00266"
FT   REGION          195..268
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          455..496
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        213..260
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        460..487
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   514 AA;  56078 MW;  A98AD36128502939 CRC64;
     MYKNQLQELA QRSCFNLPAY TCLREGPDHA PRFKAAVNFN GEQFESPGFF TTLRQAEHAA
     AEVALAALAR RGPSYSLAAR ILDETGVYKN LLQEVAQRVG APLPSYTTER SGLGHLPVFT
     CTVELAGITF TGDPAKNKKQ AEKNAASAAW SSLRQLVRQE ASSSNEPESN DEQEQIRIAR
     ALLNYRLKEK MAMANNPHAS PFPKKFPMQP ERRTAFPQSS HSSYSKILPL FRPKSNSRSR
     PESPAASDAA SQTPFRPTES PNPRSRFPAA EAAPYVPVGH FRMPCHSMAP PVTVRTSIPV
     FSAPPLPPPG ARTQQLPPLM SHPPPIRMAS PVRIRPAPPL FTPSAVQGPK PMMPVQIKDV
     QHQQIKETRS PVMPVQVKDA QNQLLKGSLS PVIPVQIKDV QSQPPKEALS PAIPVQIKDV
     QLQPRNEPVS IGKGVVPLPA IRPPVKVEAP AEVKEASQPV AGSSVVQCKA DTSPDSLPKT
     QLKTANADNA DAKDDHLPVD AEEVEDIIRH LELK
 
 
维奥蛋白资源库 - 中文蛋白资源 CopyRight © 2010-2025