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DRC11_MOUSE
ID   DRC11_MOUSE             Reviewed;         857 AA.
AC   Q9CUL5; Q3UT65; Q9D4P1;
DT   03-APR-2007, integrated into UniProtKB/Swiss-Prot.
DT   03-APR-2007, sequence version 2.
DT   03-AUG-2022, entry version 118.
DE   RecName: Full=Dynein regulatory complex protein 11 {ECO:0000250|UniProtKB:A8IHT2};
DE   AltName: Full=IQ and AAA domain-containing protein 1;
GN   Name=Iqca1; Synonyms=Drc11 {ECO:0000250|UniProtKB:A8IHT2}, Iqca;
OS   Mus musculus (Mouse).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC   Murinae; Mus; Mus.
OX   NCBI_TaxID=10090;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2), AND NUCLEOTIDE SEQUENCE
RP   [LARGE SCALE MRNA] OF 1-353 (ISOFORM 1).
RC   STRAIN=C57BL/6J; TISSUE=Egg, and Testis;
RX   PubMed=16141072; DOI=10.1126/science.1112014;
RA   Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N.,
RA   Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K.,
RA   Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J.,
RA   Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R.,
RA   Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T.,
RA   Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A.,
RA   Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B.,
RA   Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M.,
RA   Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S.,
RA   Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E.,
RA   Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D.,
RA   Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M.,
RA   Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H.,
RA   Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V.,
RA   Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S.,
RA   Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H.,
RA   Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N.,
RA   Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F.,
RA   Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G.,
RA   Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z.,
RA   Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C.,
RA   Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y.,
RA   Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S.,
RA   Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K.,
RA   Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R.,
RA   van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H.,
RA   Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M.,
RA   Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C.,
RA   Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S.,
RA   Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K.,
RA   Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M.,
RA   Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C.,
RA   Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A.,
RA   Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.;
RT   "The transcriptional landscape of the mammalian genome.";
RL   Science 309:1559-1563(2005).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=C57BL/6J;
RX   PubMed=19468303; DOI=10.1371/journal.pbio.1000112;
RA   Church D.M., Goodstadt L., Hillier L.W., Zody M.C., Goldstein S., She X.,
RA   Bult C.J., Agarwala R., Cherry J.L., DiCuccio M., Hlavina W., Kapustin Y.,
RA   Meric P., Maglott D., Birtle Z., Marques A.C., Graves T., Zhou S.,
RA   Teague B., Potamousis K., Churas C., Place M., Herschleb J., Runnheim R.,
RA   Forrest D., Amos-Landgraf J., Schwartz D.C., Cheng Z., Lindblad-Toh K.,
RA   Eichler E.E., Ponting C.P.;
RT   "Lineage-specific biology revealed by a finished genome assembly of the
RT   mouse.";
RL   PLoS Biol. 7:E1000112-E1000112(2009).
CC   -!- FUNCTION: Component of the nexin-dynein regulatory complex (N-DRC), a
CC       key regulator of ciliary/flagellar motility which maintains the
CC       alignment and integrity of the distal axoneme and regulates microtubule
CC       sliding in motile axonemes. {ECO:0000250|UniProtKB:A8IHT2}.
CC   -!- SUBUNIT: Component of the nexin-dynein regulatory complex (N-DRC).
CC       {ECO:0000250|UniProtKB:A8IHT2}.
CC   -!- SUBCELLULAR LOCATION: Cytoplasm, cytoskeleton, flagellum axoneme
CC       {ECO:0000250|UniProtKB:A8IHT2}.
CC   -!- ALTERNATIVE PRODUCTS:
CC       Event=Alternative splicing; Named isoforms=3;
CC       Name=1;
CC         IsoId=Q9CUL5-1; Sequence=Displayed;
CC       Name=2;
CC         IsoId=Q9CUL5-2; Sequence=VSP_024334, VSP_024335;
CC       Name=3;
CC         IsoId=Q9CUL5-3; Sequence=VSP_024333, VSP_024336, VSP_024337;
CC   -!- SIMILARITY: Belongs to the AAA ATPase family. DRC11 subfamily.
CC       {ECO:0000305}.
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DR   EMBL; AK015512; BAB29877.1; -; mRNA.
DR   EMBL; AK016353; BAB30202.1; -; mRNA.
DR   EMBL; AK139726; BAE24115.1; -; mRNA.
DR   EMBL; AC110261; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; AC124227; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   AlphaFoldDB; Q9CUL5; -.
DR   SMR; Q9CUL5; -.
DR   BioGRID; 217079; 3.
DR   STRING; 10090.ENSMUSP00000108717; -.
DR   iPTMnet; Q9CUL5; -.
DR   PhosphoSitePlus; Q9CUL5; -.
DR   jPOST; Q9CUL5; -.
DR   MaxQB; Q9CUL5; -.
DR   PRIDE; Q9CUL5; -.
DR   Antibodypedia; 34467; 87 antibodies from 15 providers.
DR   Ensembl; ENSMUST00000212394; ENSMUSP00000148643; ENSMUSG00000026301. [Q9CUL5-1]
DR   UCSC; uc007bzf.2; mouse. [Q9CUL5-3]
DR   MGI; MGI:1922168; Iqca.
DR   VEuPathDB; HostDB:ENSMUSG00000026301; -.
DR   eggNOG; ENOG502QTPP; Eukaryota.
DR   GeneTree; ENSGT00940000154067; -.
DR   InParanoid; Q9CUL5; -.
DR   PhylomeDB; Q9CUL5; -.
DR   ChiTaRS; Iqca; mouse.
DR   PRO; PR:Q9CUL5; -.
DR   Proteomes; UP000000589; Chromosome 1.
DR   RNAct; Q9CUL5; protein.
DR   Bgee; ENSMUSG00000026301; Expressed in animal zygote and 61 other tissues.
DR   ExpressionAtlas; Q9CUL5; baseline and differential.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.
DR   GO; GO:0005856; C:cytoskeleton; IEA:UniProtKB-KW.
DR   GO; GO:0031514; C:motile cilium; IEA:UniProtKB-KW.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR   GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR   Gene3D; 3.40.50.300; -; 1.
DR   InterPro; IPR003593; AAA+_ATPase.
DR   InterPro; IPR003959; ATPase_AAA_core.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   Pfam; PF00004; AAA; 1.
DR   SMART; SM00382; AAA; 1.
DR   SUPFAM; SSF52540; SSF52540; 1.
PE   2: Evidence at transcript level;
KW   Alternative splicing; ATP-binding; Cell projection; Cilium; Cytoplasm;
KW   Cytoskeleton; Flagellum; Nucleotide-binding; Reference proteome.
FT   CHAIN           1..857
FT                   /note="Dynein regulatory complex protein 11"
FT                   /id="PRO_0000283573"
FT   DOMAIN          206..235
FT                   /note="IQ"
FT   REGION          348..388
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          834..857
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        357..373
FT                   /note="Basic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        374..388
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   BINDING         598..605
FT                   /ligand="ATP"
FT                   /ligand_id="ChEBI:CHEBI:30616"
FT                   /evidence="ECO:0000255"
FT   VAR_SEQ         1..394
FT                   /note="Missing (in isoform 3)"
FT                   /evidence="ECO:0000305"
FT                   /id="VSP_024333"
FT   VAR_SEQ         309..313
FT                   /note="NLTGT -> LGCCS (in isoform 2)"
FT                   /evidence="ECO:0000303|PubMed:16141072"
FT                   /id="VSP_024334"
FT   VAR_SEQ         314..857
FT                   /note="Missing (in isoform 2)"
FT                   /evidence="ECO:0000303|PubMed:16141072"
FT                   /id="VSP_024335"
FT   VAR_SEQ         480..516
FT                   /note="EQTIVFPREVFGNPRVALVSLHIRALWGISYLSFNNG -> KNKGRKGRRGK
FT                   RGKKEKDLTADR (in isoform 3)"
FT                   /evidence="ECO:0000305"
FT                   /id="VSP_024336"
FT   VAR_SEQ         735..739
FT                   /note="Missing (in isoform 3)"
FT                   /evidence="ECO:0000305"
FT                   /id="VSP_024337"
FT   CONFLICT        189
FT                   /note="Q -> K (in Ref. 1; BAB30202)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        353
FT                   /note="K -> R (in Ref. 1; BAB29877)"
FT                   /evidence="ECO:0000305"
SQ   SEQUENCE   857 AA;  99875 MW;  6DC624B6E5DBE875 CRC64;
     MSNLMYNKMW HQTQEALNSL LDKEFQKMSE PQANKVLVFQ MLATFYINYV QIFRNMENVY
     DQIVHPQKRM LIRKVLDGVM GRILELKNEM VELEMTEFHY FDDILQDLKL SPQQLDVPIP
     RYFLKERLEV IKGREKILAR ILTECGLNLP VKYAAKSIAL EEAVKLIQIA ERARQGRLRA
     LFMKQIFLQE CRAKEMKLLG HRLLDTKLAA LQIQKVWRGF HQCKKTVKER EEEMVFLGMK
     PSPLFNEVSD AIVQSKQVTN LRDEVQLKHE QDYQEALVNI KEDLKMLEGP DIKEHLQDQI
     RQWFIECRNL TGTFPDYPNE EDGGSALIFS NKTPEQVMGD IIATQEEEEK LKKKKKKEDK
     ENKGKKGKKE KKEKKEKKVS LKEKAMKDED EEWKMSPSLF LQLMEEGNSL YKDIWLNKDE
     SWNFPQDYDP ELIKEEKRKE LEMEIRVQVD ELMRQELKNL KLAVNREMEI PPRQKKGKKE
     QTIVFPREVF GNPRVALVSL HIRALWGISY LSFNNGTIES LYQELVEKGL LIQALKVNLS
     DYIGEYSYLG TTLRQVAIEP MPSLLDVRQL ITLYGILPLG SAEVHERAPL VKSLLLAGPS
     GVGKKMLVHA ICTETGANLF NLSALNIAGK YPGKTGLQMM IHLVFKVARQ LQPSVVWIQD
     TEKTFYKKVP QAEKRFEPKR LKRYLPKLLK LLKPDDRILI VGTTHRPFDA ELQPFCRVYQ
     KIILVPRPDY ASRYGKFHEV LWKEIILRNG GKLTNSLNIS CLSKVTDGFT QGQIVQVIKD
     VLTERRLRQQ AHKPLTAIEF ITMMTNMNPV YREEEESFKN WYAKTPLGKK RVLSLTVGNK
     EKEKDKGKKG KRGKKKK
 
 
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