DRE1B_ORYSJ
ID DRE1B_ORYSJ Reviewed; 218 AA.
AC Q3T5N4; Q7XJI0; Q8LLU8;
DT 18-MAR-2008, integrated into UniProtKB/Swiss-Prot.
DT 11-OCT-2005, sequence version 1.
DT 03-AUG-2022, entry version 102.
DE RecName: Full=Dehydration-responsive element-binding protein 1B;
DE Short=Protein DREB1B;
GN Name=DREB1B; Synonyms=ERF31;
GN OrderedLocusNames=Os09g0522000, LOC_Os09g35010;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], INDUCTION BY COLD, AND GENE FAMILY.
RX PubMed=12609047; DOI=10.1046/j.1365-313x.2003.01661.x;
RA Dubouzet J.G., Sakuma Y., Ito Y., Kasuga M., Dubouzet E.G., Miura S.,
RA Seki M., Shinozaki K., Yamaguchi-Shinozaki K.;
RT "OsDREB genes in rice, Oryza sativa L., encode transcription activators
RT that function in drought-, high-salt- and cold-responsive gene
RT expression.";
RL Plant J. 33:751-763(2003).
RN [2]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RA Yao Q., Peng R., Xiong A.;
RL Submitted (JUN-2003) to the EMBL/GenBank/DDBJ databases.
RN [3]
RP NUCLEOTIDE SEQUENCE [MRNA], AND GENE FAMILY.
RC STRAIN=cv. Nipponbare;
RX PubMed=16244905; DOI=10.1007/s11103-005-2498-2;
RA Skinner J.S., von Zitzewitz J., Szuecs P., Marquez-Cedillo L.,
RA Filichkin T., Amundsen K., Stockinger E.J., Thomashow M.F., Chen T.H.H.,
RA Hayes P.M.;
RT "Structural, functional, and phylogenetic characterization of a large CBF
RT gene family in barley.";
RL Plant Mol. Biol. 59:533-551(2005).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [5]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [6]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [7]
RP FUNCTION.
RX PubMed=16284406; DOI=10.1093/pcp/pci230;
RA Ito Y., Katsura K., Maruyama K., Taji T., Kobayashi M., Seki M.,
RA Shinozaki K., Yamaguchi-Shinozaki K.;
RT "Functional analysis of rice DREB1/CBF-type transcription factors involved
RT in cold-responsive gene expression in transgenic rice.";
RL Plant Cell Physiol. 47:141-153(2006).
RN [8]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=16407444; DOI=10.1104/pp.105.073783;
RA Nakano T., Suzuki K., Fujimura T., Shinshi H.;
RT "Genome-wide analysis of the ERF gene family in Arabidopsis and rice.";
RL Plant Physiol. 140:411-432(2006).
CC -!- FUNCTION: Transcriptional activator that binds specifically to the DNA
CC sequence 5'-[AG]CCGAC-3'. Binding to the C-repeat/DRE element mediates
CC high salinity- and dehydration-inducible transcription. Confers
CC resistance to high salt, cold and drought stress.
CC {ECO:0000269|PubMed:16284406}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000305}.
CC -!- INDUCTION: By cold stress. {ECO:0000269|PubMed:12609047}.
CC -!- SIMILARITY: Belongs to the AP2/ERF transcription factor family. ERF
CC subfamily. {ECO:0000305}.
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DR EMBL; AF300972; AAN02488.1; -; mRNA.
DR EMBL; AY319971; AAP83888.1; -; Genomic_DNA.
DR EMBL; AY785894; AAX28958.1; -; mRNA.
DR EMBL; AP008215; BAF25624.1; -; Genomic_DNA.
DR EMBL; AP014965; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR RefSeq; XP_015610928.1; XM_015755442.1.
DR AlphaFoldDB; Q3T5N4; -.
DR SMR; Q3T5N4; -.
DR STRING; 4530.OS09T0522000-01; -.
DR PaxDb; Q3T5N4; -.
DR PRIDE; Q3T5N4; -.
DR GeneID; 4347618; -.
DR KEGG; osa:4347618; -.
DR InParanoid; Q3T5N4; -.
DR OrthoDB; 1352198at2759; -.
DR Proteomes; UP000000763; Chromosome 9.
DR Proteomes; UP000059680; Chromosome 9.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR Gene3D; 3.30.730.10; -; 1.
DR InterPro; IPR001471; AP2/ERF_dom.
DR InterPro; IPR036955; AP2/ERF_dom_sf.
DR InterPro; IPR016177; DNA-bd_dom_sf.
DR InterPro; IPR045277; DRE1A-I.
DR PANTHER; PTHR31839; PTHR31839; 1.
DR Pfam; PF00847; AP2; 1.
DR PRINTS; PR00367; ETHRSPELEMNT.
DR SMART; SM00380; AP2; 1.
DR SUPFAM; SSF54171; SSF54171; 1.
DR PROSITE; PS51032; AP2_ERF; 1.
PE 2: Evidence at transcript level;
KW Activator; DNA-binding; Nucleus; Reference proteome; Stress response;
KW Transcription; Transcription regulation.
FT CHAIN 1..218
FT /note="Dehydration-responsive element-binding protein 1B"
FT /id="PRO_0000323040"
FT DNA_BIND 32..95
FT /note="AP2/ERF"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00366"
FT REGION 1..26
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 131..151
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT CONFLICT 77
FT /note="A -> G (in Ref. 2; AAP83888)"
FT /evidence="ECO:0000305"
FT CONFLICT 97
FT /note="S -> F (in Ref. 1; AAN02488 and 2; AAP83888)"
FT /evidence="ECO:0000305"
FT CONFLICT 119
FT /note="A -> P (in Ref. 1; AAN02488 and 2; AAP83888)"
FT /evidence="ECO:0000305"
FT CONFLICT 150
FT /note="D -> A (in Ref. 1; AAN02488 and 2; AAP83888)"
FT /evidence="ECO:0000305"
FT CONFLICT 153
FT /note="D -> E (in Ref. 2; AAP83888)"
FT /evidence="ECO:0000305"
FT CONFLICT 210
FT /note="G -> D (in Ref. 2; AAP83888)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 218 AA; 23238 MW; 58F4BDC7FCE695F7 CRC64;
MEVEEAAYRT VWSEPPKRPA GRTKFRETRH PVYRGVRRRG GRPGAAGRWV CEVRVPGARG
SRLWLGTFAT AEAAARAHDA AALALRGRAA CLNFADSAWR MPPVPASAAL AGARGVRDAV
AVAVEAFQRQ SAAPSSPAET FANDGDEEED NKDVLPVAAA EVFDAGAFEL DDGFRFGGMD
AGSYYASLAQ GLLVEPPAAG AWWEDGELAG SDMPLWSY
