DRE1C_ORYSJ
ID DRE1C_ORYSJ Reviewed; 214 AA.
AC Q9LWV3; A0A0P0WSE7; Q8H645;
DT 18-MAR-2008, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 03-AUG-2022, entry version 123.
DE RecName: Full=Dehydration-responsive element-binding protein 1C;
DE Short=Protein DREB1C;
DE AltName: Full=Protein C-repeat-binding factor 1;
GN Name=DREB1C; Synonyms=CBF1, ERF26;
GN OrderedLocusNames=Os06g0127100, LOC_Os06g03670;
GN ORFNames=OsJ_019159, OSJNBa0038F22.13, P0425F02.47;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RA Quanhong Y., Rihe P., Aisheng X.;
RT "Isolation of rice DREBs, transcription factors involved in
RT dehydration- and cold-inducible gene expression.";
RL Submitted (JUN-2003) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
RN [6]
RP GENE FAMILY.
RX PubMed=12609047; DOI=10.1046/j.1365-313x.2003.01661.x;
RA Dubouzet J.G., Sakuma Y., Ito Y., Kasuga M., Dubouzet E.G., Miura S.,
RA Seki M., Shinozaki K., Yamaguchi-Shinozaki K.;
RT "OsDREB genes in rice, Oryza sativa L., encode transcription activators
RT that function in drought-, high-salt- and cold-responsive gene
RT expression.";
RL Plant J. 33:751-763(2003).
RN [7]
RP GENE FAMILY.
RC STRAIN=cv. Nipponbare;
RX PubMed=16244905; DOI=10.1007/s11103-005-2498-2;
RA Skinner J.S., von Zitzewitz J., Szuecs P., Marquez-Cedillo L.,
RA Filichkin T., Amundsen K., Stockinger E.J., Thomashow M.F., Chen T.H.H.,
RA Hayes P.M.;
RT "Structural, functional, and phylogenetic characterization of a large CBF
RT gene family in barley.";
RL Plant Mol. Biol. 59:533-551(2005).
RN [8]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=16407444; DOI=10.1104/pp.105.073783;
RA Nakano T., Suzuki K., Fujimura T., Shinshi H.;
RT "Genome-wide analysis of the ERF gene family in Arabidopsis and rice.";
RL Plant Physiol. 140:411-432(2006).
CC -!- FUNCTION: Transcriptional activator that binds specifically to the DNA
CC sequence 5'-[AG]CCGAC-3'. Binding to the C-repeat/DRE element mediates
CC high salinity- and dehydration-inducible transcription (By similarity).
CC {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the AP2/ERF transcription factor family. ERF
CC subfamily. {ECO:0000305}.
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DR EMBL; AY327040; AAP92125.1; -; mRNA.
DR EMBL; AP001168; BAA90812.1; -; Genomic_DNA.
DR EMBL; AP002838; BAC24831.1; -; Genomic_DNA.
DR EMBL; AP008212; BAF18575.1; -; Genomic_DNA.
DR EMBL; AP014962; BAS95931.1; -; Genomic_DNA.
DR EMBL; CM000143; EAZ35676.1; -; Genomic_DNA.
DR RefSeq; XP_015642451.1; XM_015786965.1.
DR AlphaFoldDB; Q9LWV3; -.
DR SMR; Q9LWV3; -.
DR STRING; 4530.OS06T0127100-01; -.
DR PaxDb; Q9LWV3; -.
DR PRIDE; Q9LWV3; -.
DR EnsemblPlants; Os06t0127100-01; Os06t0127100-01; Os06g0127100.
DR GeneID; 4339974; -.
DR Gramene; Os06t0127100-01; Os06t0127100-01; Os06g0127100.
DR KEGG; osa:4339974; -.
DR eggNOG; ENOG502SNA4; Eukaryota.
DR HOGENOM; CLU_063331_1_0_1; -.
DR InParanoid; Q9LWV3; -.
DR OMA; AMYGNMD; -.
DR OrthoDB; 1352198at2759; -.
DR PlantReactome; R-OSA-8879007; Response to cold temperature.
DR Proteomes; UP000000763; Chromosome 6.
DR Proteomes; UP000007752; Chromosome 6.
DR Proteomes; UP000059680; Chromosome 6.
DR Genevisible; Q9LWV3; OS.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR CDD; cd00018; AP2; 1.
DR Gene3D; 3.30.730.10; -; 1.
DR InterPro; IPR001471; AP2/ERF_dom.
DR InterPro; IPR036955; AP2/ERF_dom_sf.
DR InterPro; IPR016177; DNA-bd_dom_sf.
DR InterPro; IPR045277; DRE1A-I.
DR PANTHER; PTHR31839; PTHR31839; 1.
DR Pfam; PF00847; AP2; 1.
DR PRINTS; PR00367; ETHRSPELEMNT.
DR SMART; SM00380; AP2; 1.
DR SUPFAM; SSF54171; SSF54171; 1.
DR PROSITE; PS51032; AP2_ERF; 1.
PE 2: Evidence at transcript level;
KW Activator; DNA-binding; Nucleus; Reference proteome; Stress response;
KW Transcription; Transcription regulation.
FT CHAIN 1..214
FT /note="Dehydration-responsive element-binding protein 1C"
FT /id="PRO_0000323041"
FT DNA_BIND 33..91
FT /note="AP2/ERF"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00366"
FT REGION 1..24
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 214 AA; 23110 MW; 8838D48CBB151F69 CRC64;
MEYYEQEEYA TVTSAPPKRP AGRTKFRETR HPVYRGVRRR GPAGRWVCEV REPNKKSRIW
LGTFATAEAA ARAHDVAALA LRGRGACLNF ADSARLLRVD PATLATPDDI RRAAIELAES
CPHDAAAAAA SSSAAAVEAS AAAAPAMMMQ YQDDMAATPS SYDYAYYGNM DFDQPSYYYD
GMGGGGEYQS WQMDGDDDGG AGGYGGGDVT LWSY