DRL14_ARATH
ID DRL14_ARATH Reviewed; 893 AA.
AC Q9SI85; O82099; Q9SXD4;
DT 13-APR-2004, integrated into UniProtKB/Swiss-Prot.
DT 13-APR-2004, sequence version 2.
DT 03-AUG-2022, entry version 138.
DE RecName: Full=Probable disease resistance protein At1g62630;
DE AltName: Full=pNd4;
GN OrderedLocusNames=At1g62630; ORFNames=F23N19.1, T3P18.19;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 181-351.
RC STRAIN=cv. Nd-1;
RX PubMed=9670562; DOI=10.1046/j.1365-313x.1998.00138.x;
RA Speulman E., Bouchez D., Holub E.B., Beynon J.L.;
RT "Disease resistance gene homologs correlate with disease resistance loci of
RT Arabidopsis thaliana.";
RL Plant J. 14:467-474(1998).
CC -!- FUNCTION: Probable disease resistance protein. {ECO:0000250}.
CC -!- DOMAIN: The LRR repeats probably act as specificity determinant of
CC pathogen recognition. {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the disease resistance NB-LRR family.
CC {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAF19533.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC -!- WEB RESOURCE: Name=NIB-LRRS; Note=Functional and comparative genomics
CC of disease resistance gene homologs;
CC URL="http://niblrrs.ucdavis.edu";
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DR EMBL; AC005698; AAD43620.1; -; Genomic_DNA.
DR EMBL; AC007190; AAF19533.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002684; AEE33988.1; -; Genomic_DNA.
DR EMBL; U97220; AAC50028.1; -; Genomic_DNA.
DR PIR; H96651; H96651.
DR RefSeq; NP_176451.1; NM_104941.2.
DR AlphaFoldDB; Q9SI85; -.
DR SMR; Q9SI85; -.
DR STRING; 3702.AT1G62630.1; -.
DR iPTMnet; Q9SI85; -.
DR PaxDb; Q9SI85; -.
DR PRIDE; Q9SI85; -.
DR ProteomicsDB; 224311; -.
DR EnsemblPlants; AT1G62630.1; AT1G62630.1; AT1G62630.
DR GeneID; 842560; -.
DR Gramene; AT1G62630.1; AT1G62630.1; AT1G62630.
DR KEGG; ath:AT1G62630; -.
DR Araport; AT1G62630; -.
DR TAIR; locus:2203881; AT1G62630.
DR eggNOG; KOG4658; Eukaryota.
DR HOGENOM; CLU_000427_4_0_1; -.
DR InParanoid; Q9SI85; -.
DR OMA; MGTICLE; -.
DR OrthoDB; 320361at2759; -.
DR PhylomeDB; Q9SI85; -.
DR PRO; PR:Q9SI85; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q9SI85; baseline and differential.
DR Genevisible; Q9SI85; AT.
DR GO; GO:0005634; C:nucleus; HDA:TAIR.
DR GO; GO:0043531; F:ADP binding; IEA:InterPro.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0006952; P:defense response; IEA:UniProtKB-KW.
DR Gene3D; 1.10.10.10; -; 1.
DR Gene3D; 1.10.8.430; -; 1.
DR Gene3D; 3.40.50.300; -; 1.
DR Gene3D; 3.80.10.10; -; 2.
DR InterPro; IPR042197; Apaf_helical.
DR InterPro; IPR044974; Disease_R_plants.
DR InterPro; IPR001611; Leu-rich_rpt.
DR InterPro; IPR032675; LRR_dom_sf.
DR InterPro; IPR002182; NB-ARC.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR PANTHER; PTHR23155; PTHR23155; 2.
DR Pfam; PF13855; LRR_8; 1.
DR Pfam; PF00931; NB-ARC; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
PE 3: Inferred from homology;
KW ATP-binding; Coiled coil; Leucine-rich repeat; Nucleotide-binding;
KW Plant defense; Reference proteome; Repeat.
FT CHAIN 1..893
FT /note="Probable disease resistance protein At1g62630"
FT /id="PRO_0000212746"
FT DOMAIN 136..440
FT /note="NB-ARC"
FT REPEAT 516..537
FT /note="LRR 1"
FT REPEAT 538..559
FT /note="LRR 2"
FT REPEAT 571..593
FT /note="LRR 3"
FT REPEAT 595..617
FT /note="LRR 4"
FT REPEAT 618..640
FT /note="LRR 5"
FT REPEAT 641..663
FT /note="LRR 6"
FT COILED 24..68
FT /evidence="ECO:0000255"
FT BINDING 179..186
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000255"
FT CONFLICT 208
FT /note="W -> R (in Ref. 3; AAC50028)"
FT /evidence="ECO:0000305"
FT CONFLICT 336
FT /note="L -> I (in Ref. 3; AAC50028)"
FT /evidence="ECO:0000305"
FT CONFLICT 347
FT /note="L -> F (in Ref. 3)"
FT /evidence="ECO:0000305"
FT CONFLICT 500
FT /note="R -> C (in Ref. 1; AAF19533)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 893 AA; 101905 MW; E506E93F155368DC CRC64;
MGISFSIPFD PCVNKVSQWL DMKGSYTHNL EKNLVALETT MEELKAKRDD LLRRLKREED
RGLQRLSEFQ VWLNRVATVE DIIITLLRDR DVEIQRLCLC RFCSKNLTTS YRYGKSVFLR
LREVEKLKGE VFGVITEQAS TSAFEERPLQ PTIVGQKKML DKAWKHLMED GTGIMGMYGM
GGVGKTTLLT QLFNMFNKDK CGFDIGIWVV VSQEVNVEKI QDEIAQKLGL GGHEWTQRDI
SQKGVHLFNF LKNKKFVLFL DDLWDKVELA NIGVPDPRTQ KGCKLAFTSR SLNVCTSMGD
EEPMEVQCLE ENVAFDLFQK KVGQKTLGSD PGIPQLARIV AKKCCGLPLA LNVIGETMSC
KRTIQEWRNA IHVLNSYAAE FIGMEDKILP LLKYSYDNLK GEHVKSSLLY CALYPEDAKI
RKEDLIEHWI CEEIIDGSEG IEKAEDKGYD IIGSLVRASL LMECVDLKGK SSVIMHDVVR
EMALWIASEL GIQKEAFIVR AGVGVREIPK VKNWNVVRRM SLMGNKIHHL VGSYECMELT
TLLLGEGEYG SIWRWSEIKT ISSEFFNCMP KLAVLDLSHN QSLFELPEEI SNLVSLKYLN
LSHTGIRHLS KGIQELKKII HLNLEHTSKL ESIDGISSLH NLKVLKLYGS RLPWDLNTVK
ELETLEHLEI LTTTIDPRAK QFLSSHRLMS RSRLLQIFGS NIFSPDRQLE SLSVSTDKLR
EFEIMCCSIS EIKMGGICNF LSLVDVTIYN CEGLRELTFL IFAPKLRSLS VVDAKDLEDI
INEEKACEGE DSGIVPFPEL KYLNLDDLPK LKNIYRRPLP FLCLEKITIG ECPNLRKLPL
DSRSGKQGEN GCIIHYKDSR WLKGVKWADE ATKKRFLPSC EHRLERCETI FED