DRL20_ARATH
ID DRL20_ARATH Reviewed; 884 AA.
AC Q9SH22;
DT 13-APR-2004, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-2000, sequence version 1.
DT 03-AUG-2022, entry version 130.
DE RecName: Full=Probable disease resistance protein At1g63360;
GN OrderedLocusNames=At1g63360; ORFNames=F2K11.23, F9N12.2;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
CC -!- FUNCTION: Probable disease resistance protein. {ECO:0000250}.
CC -!- DOMAIN: The LRR repeats probably act as specificity determinant of
CC pathogen recognition. {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the disease resistance NB-LRR family.
CC {ECO:0000305}.
CC -!- WEB RESOURCE: Name=NIB-LRRS; Note=Functional and comparative genomics
CC of disease resistance gene homologs;
CC URL="http://niblrrs.ucdavis.edu";
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DR EMBL; AC008047; AAF19701.1; -; Genomic_DNA.
DR EMBL; AC022355; AAG52149.1; -; Genomic_DNA.
DR EMBL; CP002684; AEE34090.1; -; Genomic_DNA.
DR PIR; F96659; F96659.
DR RefSeq; NP_176525.1; NM_105015.2.
DR AlphaFoldDB; Q9SH22; -.
DR SMR; Q9SH22; -.
DR BioGRID; 27863; 2.
DR IntAct; Q9SH22; 2.
DR STRING; 3702.AT1G63360.1; -.
DR PaxDb; Q9SH22; -.
DR PRIDE; Q9SH22; -.
DR ProteomicsDB; 224317; -.
DR EnsemblPlants; AT1G63360.1; AT1G63360.1; AT1G63360.
DR GeneID; 842642; -.
DR Gramene; AT1G63360.1; AT1G63360.1; AT1G63360.
DR KEGG; ath:AT1G63360; -.
DR Araport; AT1G63360; -.
DR TAIR; locus:2031356; AT1G63360.
DR eggNOG; KOG4658; Eukaryota.
DR HOGENOM; CLU_000427_4_0_1; -.
DR InParanoid; Q9SH22; -.
DR OMA; NCEEMEM; -.
DR OrthoDB; 320361at2759; -.
DR PhylomeDB; Q9SH22; -.
DR PRO; PR:Q9SH22; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q9SH22; baseline and differential.
DR Genevisible; Q9SH22; AT.
DR GO; GO:0005634; C:nucleus; HDA:TAIR.
DR GO; GO:0043531; F:ADP binding; IEA:InterPro.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0006952; P:defense response; IEA:UniProtKB-KW.
DR Gene3D; 1.10.10.10; -; 1.
DR Gene3D; 1.10.8.430; -; 1.
DR Gene3D; 3.40.50.300; -; 1.
DR Gene3D; 3.80.10.10; -; 2.
DR InterPro; IPR042197; Apaf_helical.
DR InterPro; IPR044974; Disease_R_plants.
DR InterPro; IPR001611; Leu-rich_rpt.
DR InterPro; IPR032675; LRR_dom_sf.
DR InterPro; IPR002182; NB-ARC.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR PANTHER; PTHR23155; PTHR23155; 1.
DR Pfam; PF13855; LRR_8; 1.
DR Pfam; PF00931; NB-ARC; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
PE 2: Evidence at transcript level;
KW ATP-binding; Coiled coil; Leucine-rich repeat; Nucleotide-binding;
KW Plant defense; Reference proteome; Repeat.
FT CHAIN 1..884
FT /note="Probable disease resistance protein At1g63360"
FT /id="PRO_0000212752"
FT DOMAIN 136..440
FT /note="NB-ARC"
FT REPEAT 569..591
FT /note="LRR 1"
FT REPEAT 593..615
FT /note="LRR 2"
FT REPEAT 616..638
FT /note="LRR 3"
FT REPEAT 639..661
FT /note="LRR 4"
FT COILED 20..70
FT /evidence="ECO:0000255"
FT BINDING 179..186
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000255"
SQ SEQUENCE 884 AA; 101079 MW; AD080B807DC0E139 CRC64;
MGISFSIPFD PCVNKVSQWL DMKVSYTHNL EKNLAALEKT MKELKAKRDD LERRLKREEA
RGLQRLSEFQ VWLDSVATVE DIIITLLRDR NVEIQRLCLC RFCSKSLTRS YRYGKSVFLR
LREVEKLKGE VFGVITEQAS TSAFEERPLQ PTIVGQDTML DKAGKHLMED GVGIMGMYGM
GGVGKTTLLT QLYNMFNKDK CGFDIGIWVV VSQEFHVEKV QDEIAQKLGL GGDEWTQKDK
SQKGICLYNI LREKSFVLFL DDIWEKVDLA EIGVPDPRTK KGRKLAFTTR SQEVCARMGV
EHPMEVQCLE ENVAFDLFQK KVGQTTLGSD PGIPQLARIV AKKCCGLPLA LNVIGETMSC
KRTIQEWRHA IHVLNSYAAE FIGMEDKVLP LLKYSYDNLK GEQVKSSLLY CALYPEDAKI
LKEDLIEHWI CEEIIDGSEG IEKAEDKGYE IIGCLVRASL LMEWDDGDGR RAVCMHDVVR
EMALWIASEL GIQKEAFIVR AGVGVREIPK IKNWNVVRRM SLMENKIHHL VGSYECMELT
TLLLGKREYG SIRSQLKTIS SEFFNCMPKL AVLDLSHNKS LFELPEEISN LVSLKYLNLL
YTEISHLPKG IQELKKIIHL NLEYTRKLES ITGISSLHNL KVLKLFRSRL PWDLNTVKEL
ETLEHLEILT TTIDPRAKQF LSSHRLLSHS RLLEIYGSSV SSLNRHLESL SVSTDKLREF
QIKSCSISEI KMGGICNFLS LVDVNIFNCE GLRELTFLIF APKIRSLSVW HAKDLEDIIN
EEKACEGEES GILPFPELNF LTLHDLPKLK KIYWRPLPFL CLEEINIREC PNLRKLPLDS
TSGKQGENGC IIRNKDSRWF EGVKWADEAT KKRFLPSCQL ISLK