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DRL44_ARATH
ID   DRL44_ARATH             Reviewed;        1017 AA.
AC   P0DI16; Q8W3J8; Q8W3J9; Q94HW5; Q9SLU5; Q9SLU6;
DT   16-MAY-2012, integrated into UniProtKB/Swiss-Prot.
DT   16-MAY-2012, sequence version 1.
DT   03-AUG-2022, entry version 80.
DE   RecName: Full=Probable disease resistance protein RDL5;
GN   Name=RDL5; OrderedLocusNames=At1g59124; ORFNames=T4M14.5;
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX   NCBI_TaxID=3702;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [GENOMIC DNA] (ISOFORM 2).
RC   STRAIN=cv. Columbia;
RX   PubMed=10548732; DOI=10.1016/s0378-1119(99)00403-5;
RA   Kato A., Suzuki M., Kuwahara A., Ooe H., Higano-Inaba K., Komeda Y.;
RT   "Isolation and analysis of cDNA within a 300 kb Arabidopsis thaliana
RT   genomic region located around the 100 map unit of chromosome 1.";
RL   Gene 239:309-316(1999).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=11130712; DOI=10.1038/35048500;
RA   Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA   Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA   Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA   Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA   Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA   Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA   Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA   Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA   Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA   Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA   Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA   Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA   Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA   Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA   Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT   "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL   Nature 408:816-820(2000).
RN   [3]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Columbia;
RX   PubMed=27862469; DOI=10.1111/tpj.13415;
RA   Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA   Town C.D.;
RT   "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT   genome.";
RL   Plant J. 89:789-804(2017).
CC   -!- FUNCTION: Potential disease resistance protein.
CC   -!- ALTERNATIVE PRODUCTS:
CC       Event=Alternative splicing; Named isoforms=2;
CC       Name=1;
CC         IsoId=P0DI16-1; Sequence=Displayed;
CC       Name=2;
CC         IsoId=P0DI16-2; Sequence=VSP_043691, VSP_043692;
CC   -!- SIMILARITY: Belongs to the disease resistance NB-LRR family.
CC       {ECO:0000305}.
CC   -!- SEQUENCE CAUTION:
CC       Sequence=AAK62797.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC   -!- WEB RESOURCE: Name=NIB-LRRS; Note=Functional and comparative genomics
CC       of disease resistance gene homologs;
CC       URL="http://niblrrs.ucdavis.edu";
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DR   EMBL; AB078516; BAB84017.1; -; Genomic_DNA.
DR   EMBL; AC027036; AAK62797.1; ALT_SEQ; Genomic_DNA.
DR   EMBL; CP002684; AEE33570.1; -; Genomic_DNA.
DR   EMBL; CP002684; ANM60642.1; -; Genomic_DNA.
DR   RefSeq; NP_001117515.1; NM_001124043.2. [P0DI16-2]
DR   RefSeq; NP_001322914.1; NM_001333846.1. [P0DI16-1]
DR   RefSeq; NP_176151.2; NM_104635.3. [P0DI16-2]
DR   RefSeq; NP_683446.1; NM_148605.4. [P0DI16-1]
DR   AlphaFoldDB; P0DI16; -.
DR   SMR; P0DI16; -.
DR   PRIDE; P0DI16; -.
DR   EnsemblPlants; AT1G58807.1; AT1G58807.1; AT1G58807. [P0DI16-1]
DR   EnsemblPlants; AT1G58807.2; AT1G58807.2; AT1G58807.
DR   EnsemblPlants; AT1G59124.1; AT1G59124.1; AT1G59124.
DR   EnsemblPlants; AT1G59124.2; AT1G59124.2; AT1G59124. [P0DI16-1]
DR   GeneID; 842225; -.
DR   GeneID; 842232; -.
DR   Gramene; AT1G58807.1; AT1G58807.1; AT1G58807. [P0DI16-1]
DR   Gramene; AT1G58807.2; AT1G58807.2; AT1G58807.
DR   Gramene; AT1G59124.1; AT1G59124.1; AT1G59124.
DR   Gramene; AT1G59124.2; AT1G59124.2; AT1G59124. [P0DI16-1]
DR   KEGG; ath:AT1G58807; -.
DR   KEGG; ath:AT1G59124; -.
DR   Araport; AT1G59124; -.
DR   HOGENOM; CLU_000837_35_5_1; -.
DR   InParanoid; P0DI16; -.
DR   OMA; TSAMMEN; -.
DR   OrthoDB; 164862at2759; -.
DR   PRO; PR:P0DI16; -.
DR   Proteomes; UP000006548; Chromosome 1.
DR   ExpressionAtlas; P0DI16; baseline and differential.
DR   Genevisible; P0DI16; AT.
DR   GO; GO:0043531; F:ADP binding; IEA:InterPro.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR   GO; GO:0006952; P:defense response; IEA:UniProtKB-KW.
DR   GO; GO:0051707; P:response to other organism; IEA:UniProt.
DR   CDD; cd14798; RX-CC_like; 1.
DR   Gene3D; 1.10.10.10; -; 1.
DR   Gene3D; 1.10.8.430; -; 1.
DR   Gene3D; 3.40.50.300; -; 1.
DR   Gene3D; 3.80.10.10; -; 3.
DR   InterPro; IPR042197; Apaf_helical.
DR   InterPro; IPR044974; Disease_R_plants.
DR   InterPro; IPR032675; LRR_dom_sf.
DR   InterPro; IPR002182; NB-ARC.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   InterPro; IPR038005; RX-like_CC.
DR   InterPro; IPR041118; Rx_N.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   PANTHER; PTHR23155; PTHR23155; 1.
DR   Pfam; PF00931; NB-ARC; 1.
DR   Pfam; PF18052; Rx_N; 1.
DR   SUPFAM; SSF52540; SSF52540; 1.
PE   3: Inferred from homology;
KW   Alternative splicing; ATP-binding; Coiled coil; Leucine-rich repeat;
KW   Nucleotide-binding; Plant defense; Reference proteome; Repeat.
FT   CHAIN           1..1017
FT                   /note="Probable disease resistance protein RDL5"
FT                   /id="PRO_0000417428"
FT   DOMAIN          147..460
FT                   /note="NB-ARC"
FT   REPEAT          602..627
FT                   /note="LRR 1"
FT   REPEAT          649..674
FT                   /note="LRR 2"
FT   REPEAT          675..699
FT                   /note="LRR 3"
FT   REPEAT          768..791
FT                   /note="LRR 4"
FT   REPEAT          792..819
FT                   /note="LRR 5"
FT   REPEAT          841..865
FT                   /note="LRR 6"
FT   REPEAT          937..962
FT                   /note="LRR 7"
FT   COILED          25..52
FT                   /evidence="ECO:0000255"
FT   BINDING         190..197
FT                   /ligand="ATP"
FT                   /ligand_id="ChEBI:CHEBI:30616"
FT                   /evidence="ECO:0000255"
FT   VAR_SEQ         851..855
FT                   /note="VCRKL -> IHCRL (in isoform 2)"
FT                   /evidence="ECO:0000305"
FT                   /id="VSP_043691"
FT   VAR_SEQ         856..1017
FT                   /note="Missing (in isoform 2)"
FT                   /evidence="ECO:0000305"
FT                   /id="VSP_043692"
SQ   SEQUENCE   1017 AA;  117047 MW;  8CC2F618D5DACBB4 CRC64;
     MAGELISFGI QNLWNLLSQE CELFQGVEDQ VTELKRDLNM LSSFLKDANA KKHTSAVVKN
     CVEEIKEIIY DGEDTIETFV LEQNLGKTSG IKKSIRRLAC IIPDRRRYAL GIGGLSNRIS
     KVIRDMQSFG VQQAIVDGGY KQPQGDKQRE MRQKFSKDDD SDFVGLEANV KKLVGYLVDE
     ANVQVVSITG MGGLGKTTLA KQVFNHEDVK HQFDGLSWVC VSQDFTRMNV WQKILRDLKP
     KEEEKKIMEM TQDTLQGELI RLLETSKSLI VLDDIWEKED WELIKPIFPP TKGWKVLLTS
     RNESVAMRRN TSYINFKPEC LTTEDSWTLF QRIALPMKDA AEFKIDEEKE ELGKLMIKHC
     GGLPLAIRVL GGMLAEKYTS HDWRRLSENI GSHLVGGRTN FNDDNNNTCN NVLSLSFEEL
     PSYLKHCFLY LAHFPEDYEI KVENLSYYWA AEGIFQPRHY DGETIRDVGD VYIEELVRRN
     MVISERDVKT SRFETCHLHD MMREVCLLKA KEENFLQITS SRPSTANLQS TVTSRRFVYQ
     YPTTLHVEKD INNPKLRALV VVTLGSWNLA GSSFTRLELL RVLDLIEVKI KGGKLASCIG
     KLIHLRYLSL EYAEVTHIPY SLGNLKLLIY LNLASFGRST FVPNVLMGMQ ELRYLALPSD
     MGRKTKLELS NLVKLETLEN FSTENSSLED LCGMVRLSTL NIKLIEETSL ETLAASIGGL
     KYLEKLEIYD HGSEMRTKEA GIVFDFVHLK RLWLKLYMPR LSTEQHFPSH LTTLYLESCR
     LEEDPMPILE KLLQLKELEL GFESFSGKKM VCSSGGFPQL QRLSLLKLEE WEDWKVEESS
     MPLLRTLDIQ VCRKLKQLPD EHLPSHLTSI SLFFCCLEKD PLPTLGRLVY LKELQLGFRT
     FSGRIMVCSG GGFPQLQKLS IYRLEEWEEW IVEQGSMPFL HTLYIDDCPK LKKLPDGLQF
     IYSLKNLKIS ERWKERLSEG GEEYYKVQHI PSVEFYHRVL HIFRSVGGDI TGRLLMR
 
 
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