DRMH3_ARATH
ID DRMH3_ARATH Reviewed; 137 AA.
AC Q8LD26; A8MSC4; F4I3L7; Q8H0W7; Q9C7J7;
DT 11-MAY-2016, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2002, sequence version 1.
DT 25-MAY-2022, entry version 111.
DE RecName: Full=Dormancy-associated protein homolog 3 {ECO:0000305};
DE AltName: Full=DRM1 homolog 3 {ECO:0000305};
GN OrderedLocusNames=At1g56220 {ECO:0000312|Araport:AT1G56220};
GN ORFNames=F14G9.17 {ECO:0000312|EMBL:AAG50916.1};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702 {ECO:0000312|EMBL:AAM64319.1};
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 5).
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1).
RC STRAIN=cv. Columbia;
RX PubMed=19423640; DOI=10.1093/dnares/dsp009;
RA Iida K., Fukami-Kobayashi K., Toyoda A., Sakaki Y., Kobayashi M., Seki M.,
RA Shinozaki K.;
RT "Analysis of multiple occurrences of alternative splicing events in
RT Arabidopsis thaliana using novel sequenced full-length cDNAs.";
RL DNA Res. 16:155-164(2009).
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1).
RA Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B.,
RA Feldmann K.A.;
RT "Full-length cDNA from Arabidopsis thaliana.";
RL Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases.
RN [6]
RP IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RX PubMed=19376835; DOI=10.1104/pp.109.138677;
RA Reiland S., Messerli G., Baerenfaller K., Gerrits B., Endler A.,
RA Grossmann J., Gruissem W., Baginsky S.;
RT "Large-scale Arabidopsis phosphoproteome profiling reveals novel
RT chloroplast kinase substrates and phosphorylation networks.";
RL Plant Physiol. 150:889-903(2009).
CC -!- ALTERNATIVE PRODUCTS:
CC Event=Alternative splicing; Named isoforms=5;
CC Name=1;
CC IsoId=Q8LD26-1; Sequence=Displayed;
CC Name=2;
CC IsoId=Q8LD26-2; Sequence=VSP_058257;
CC Name=3;
CC IsoId=Q8LD26-3; Sequence=VSP_058260, VSP_058261;
CC Name=4;
CC IsoId=Q8LD26-4; Sequence=VSP_058259, VSP_058262;
CC Name=5;
CC IsoId=Q8LD26-5; Sequence=VSP_058258;
CC -!- SIMILARITY: Belongs to the DRM1/ARP family. {ECO:0000305}.
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DR EMBL; AC069159; AAG50916.1; -; Genomic_DNA.
DR EMBL; CP002684; AEE33361.1; -; Genomic_DNA.
DR EMBL; CP002684; AEE33362.1; -; Genomic_DNA.
DR EMBL; BT001991; AAN72002.1; -; mRNA.
DR EMBL; BT006528; AAP21336.1; -; mRNA.
DR EMBL; AK317418; BAH20086.1; -; mRNA.
DR EMBL; AY086244; AAM64319.1; -; mRNA.
DR PIR; G96603; G96603.
DR RefSeq; NP_564714.1; NM_104501.4. [Q8LD26-1]
DR RefSeq; NP_849819.1; NM_179488.1. [Q8LD26-4]
DR AlphaFoldDB; Q8LD26; -.
DR STRING; 3702.AT1G56220.3; -.
DR iPTMnet; Q8LD26; -.
DR PaxDb; Q8LD26; -.
DR PRIDE; Q8LD26; -.
DR ProteomicsDB; 224357; -. [Q8LD26-1]
DR EnsemblPlants; AT1G56220.1; AT1G56220.1; AT1G56220. [Q8LD26-1]
DR EnsemblPlants; AT1G56220.2; AT1G56220.2; AT1G56220. [Q8LD26-4]
DR GeneID; 842075; -.
DR Gramene; AT1G56220.1; AT1G56220.1; AT1G56220. [Q8LD26-1]
DR Gramene; AT1G56220.2; AT1G56220.2; AT1G56220. [Q8LD26-4]
DR KEGG; ath:AT1G56220; -.
DR Araport; AT1G56220; -.
DR TAIR; locus:2011831; AT1G56220.
DR eggNOG; ENOG502S6R7; Eukaryota.
DR HOGENOM; CLU_116501_1_2_1; -.
DR OMA; KESHQFR; -.
DR PhylomeDB; Q8LD26; -.
DR PRO; PR:Q8LD26; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q8LD26; baseline and differential.
DR InterPro; IPR008406; DRM/ARP.
DR PANTHER; PTHR33565; PTHR33565; 1.
DR Pfam; PF05564; Auxin_repressed; 1.
PE 1: Evidence at protein level;
KW Alternative splicing; Phosphoprotein; Reference proteome.
FT CHAIN 1..137
FT /note="Dormancy-associated protein homolog 3"
FT /id="PRO_0000436082"
FT REGION 1..55
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 69..137
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 31..47
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOD_RES 81
FT /note="Phosphoserine"
FT /evidence="ECO:0000250|UniProtKB:P93017"
FT VAR_SEQ 100
FT /note="S -> SANA (in isoform 2)"
FT /id="VSP_058257"
FT VAR_SEQ 101..137
FT /note="GGKEPFRFRRRSTSDAFEKAAGGSETGPRSSPPTYGM -> EQTQGERNPFG
FT LGDGRRRMRSRRQQEDQRLDQGALLLLTACDL (in isoform 5)"
FT /id="VSP_058258"
FT VAR_SEQ 102..112
FT /note="GKEPFRFRRRS -> DKRRGKGTLSV (in isoform 4)"
FT /id="VSP_058259"
FT VAR_SEQ 102..109
FT /note="GKEPFRFR -> EGKGTLSV (in isoform 3)"
FT /id="VSP_058260"
FT VAR_SEQ 110..137
FT /note="Missing (in isoform 3)"
FT /id="VSP_058261"
FT VAR_SEQ 113..137
FT /note="Missing (in isoform 4)"
FT /id="VSP_058262"
SQ SEQUENCE 137 AA; 14518 MW; 418946A667F246FE CRC64;
MGLLDHLWDD TVAGPRPENG LGKLRKHHTF SFRPSSGNDQ SEAGSARSYG EDSLPEEAVK
VTRSIMIIKP PGYQGSSAPA SPAGSTPPLS PFSPPLSPFS GGKEPFRFRR RSTSDAFEKA
AGGSETGPRS SPPTYGM
