DSZD_MYCGD
ID DSZD_MYCGD Reviewed; 161 AA.
AC B6CDL6;
DT 25-MAY-2022, integrated into UniProtKB/Swiss-Prot.
DT 25-NOV-2008, sequence version 1.
DT 03-AUG-2022, entry version 56.
DE RecName: Full=NADH:FMN oxidoreductase;
DE EC=1.5.1.37 {ECO:0000269|PubMed:19144512};
DE EC=1.5.1.42 {ECO:0000269|PubMed:19144512};
DE AltName: Full=FAD reductase (NADH);
DE AltName: Full=FMN reductase;
DE AltName: Full=Flavin reductase {ECO:0000303|PubMed:19144512};
GN Name=dszD {ECO:0000303|PubMed:19144512}; ORFNames=AFA91_09010;
OS Mycobacterium goodii (Mycolicibacterium goodii).
OC Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
OC Mycobacterium.
OX NCBI_TaxID=134601;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA], FUNCTION, CATALYTIC ACTIVITY, AND
RP PATHWAY.
RC STRAIN=X7B;
RX PubMed=19144512; DOI=10.1016/j.biortech.2008.12.009;
RA Li J., Feng J., Li Q., Ma C., Yu B., Gao C., Wu G., Xu P.;
RT "Both FMNH2 and FADH2 can be utilized by the dibenzothiophene monooxygenase
RT from a desulfurizing bacterium Mycobacterium goodii X7B.";
RL Bioresour. Technol. 100:2594-2599(2009).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=X7B;
RX PubMed=26278197; DOI=10.1016/j.jbiotec.2015.08.004;
RA Yu B., Tao F., Li F., Hou J., Tang H., Ma C., Xu P.;
RT "Complete genome sequence of Mycobacterium goodii X7B, a facultative
RT thermophilic biodesulfurizing bacterium with industrial potential.";
RL J. Biotechnol. 212:56-57(2015).
RN [3] {ECO:0007744|PDB:3PFT}
RP X-RAY CRYSTALLOGRAPHY (1.60 ANGSTROMS) OF 5-161 IN COMPLEX WITH FMN.
RA Li Q., Xu P., Ma C., Gu L., Liu X., Zhang C., Li N., Su J., Li B., Liu S.;
RT "The flavin reductase DSZD from a desulfurizing mycobacterium goodii
RT strain: systemic manipulation and investigation based on the crystal
RT structure.";
RL Submitted (OCT-2010) to the PDB data bank.
CC -!- FUNCTION: An NADH:FMN oxidoreductase which supplies reduced FMN for the
CC '4S' desulfurization pathway that removes covalently bound sulfur from
CC dibenzothiophene (DBT) without breaking carbon-carbon bonds. Can also
CC use FAD. Provides DszC and probably also DszA (DBT-monooxygenase and
CC DBTO2-monooxygenase respectively) with reduced flavin (FMN and/or FAD).
CC {ECO:0000269|PubMed:19144512}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=FMNH2 + NAD(+) = FMN + 2 H(+) + NADH; Xref=Rhea:RHEA:21620,
CC ChEBI:CHEBI:15378, ChEBI:CHEBI:57540, ChEBI:CHEBI:57618,
CC ChEBI:CHEBI:57945, ChEBI:CHEBI:58210; EC=1.5.1.42;
CC Evidence={ECO:0000269|PubMed:19144512};
CC -!- CATALYTIC ACTIVITY:
CC Reaction=FADH2 + NAD(+) = FAD + 2 H(+) + NADH; Xref=Rhea:RHEA:30147,
CC ChEBI:CHEBI:15378, ChEBI:CHEBI:57540, ChEBI:CHEBI:57692,
CC ChEBI:CHEBI:57945, ChEBI:CHEBI:58307; EC=1.5.1.37;
CC Evidence={ECO:0000269|PubMed:19144512};
CC -!- PATHWAY: Sulfur metabolism; dibenzothiophene degradation.
CC {ECO:0000305|PubMed:19144512}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the non-flavoprotein flavin reductase family.
CC {ECO:0000305}.
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DR EMBL; EU154996; ABX11274.1; -; Genomic_DNA.
DR EMBL; CP012150; AKS31988.1; -; Genomic_DNA.
DR RefSeq; WP_049744407.1; NZ_CP012150.1.
DR PDB; 3PFT; X-ray; 1.60 A; A/B=5-161.
DR PDBsum; 3PFT; -.
DR SMR; B6CDL6; -.
DR STRING; 134601.AFA91_09010; -.
DR EnsemblBacteria; AKS31988; AKS31988; AFA91_09010.
DR KEGG; mgo:AFA91_09010; -.
DR PATRIC; fig|134601.6.peg.1871; -.
DR OrthoDB; 1681849at2; -.
DR UniPathway; UPA00346; -.
DR Proteomes; UP000062255; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0010181; F:FMN binding; IEA:InterPro.
DR GO; GO:0016646; F:oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor; IEA:UniProt.
DR GO; GO:0018896; P:dibenzothiophene catabolic process; IEA:UniProtKB-UniPathway.
DR Gene3D; 2.30.110.10; -; 1.
DR InterPro; IPR002563; Flavin_Rdtase-like_dom.
DR InterPro; IPR012349; Split_barrel_FMN-bd.
DR Pfam; PF01613; Flavin_Reduct; 1.
DR SMART; SM00903; Flavin_Reduct; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Cytoplasm; FAD; Flavoprotein; FMN; Nucleotide-binding;
KW Oxidoreductase.
FT CHAIN 1..161
FT /note="NADH:FMN oxidoreductase"
FT /id="PRO_0000455400"
FT BINDING 30
FT /ligand="FMN"
FT /ligand_id="ChEBI:CHEBI:58210"
FT /evidence="ECO:0007744|PDB:3PFT"
FT BINDING 37..40
FT /ligand="FMN"
FT /ligand_id="ChEBI:CHEBI:58210"
FT /evidence="ECO:0007744|PDB:3PFT"
FT BINDING 54..61
FT /ligand="FMN"
FT /ligand_id="ChEBI:CHEBI:58210"
FT /evidence="ECO:0007744|PDB:3PFT"
FT BINDING 88
FT /ligand="FMN"
FT /ligand_id="ChEBI:CHEBI:58210"
FT /evidence="ECO:0007744|PDB:3PFT"
FT BINDING 94
FT /ligand="FMN"
FT /ligand_id="ChEBI:CHEBI:58210"
FT /evidence="ECO:0007744|PDB:3PFT"
FT BINDING 151
FT /ligand="FMN"
FT /ligand_id="ChEBI:CHEBI:58210"
FT /evidence="ECO:0007744|PDB:3PFT"
SQ SEQUENCE 161 AA; 16879 MW; 734572180F3A0FA8 CRC64;
MSATDLSPTS LREAFGHFPS GVIAIAAEVD GTRVGLAAST FVPVSLEPPL VAFCVQNSST
TWPKLKDLPS LGISVLGEAH DTAARTLAAK TGDRFAGLET ESRDSGAVFI NGTSVWLESA
IEQLVPAGDH TIVVLRVSDI VINEAVPPIV FHRSAFRKLG A