DUF5_ARATH
ID DUF5_ARATH Reviewed; 243 AA.
AC Q0WNB1; F4IL21; O22896;
DT 08-JUN-2016, integrated into UniProtKB/Swiss-Prot.
DT 05-SEP-2006, sequence version 1.
DT 03-AUG-2022, entry version 69.
DE RecName: Full=DUF724 domain-containing protein 5 {ECO:0000305};
DE Short=AtDUF5 {ECO:0000303|PubMed:19795213};
GN Name=DUF5 {ECO:0000303|PubMed:19795213};
GN OrderedLocusNames=At2g47220 {ECO:0000312|Araport:AT2G47220};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617197; DOI=10.1038/45471;
RA Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D.,
RA Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V.,
RA Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S.,
RA Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J.,
RA Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M.,
RA Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O.,
RA Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.;
RT "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.";
RL Nature 402:761-768(1999).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A.,
RA Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y.,
RA Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., Akiyama K.,
RA Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y.,
RA Shinozaki K.;
RT "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs.";
RL Submitted (JUL-2006) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP FUNCTION, GENE FAMILY, NOMENCLATURE, SUBUNIT, SUBCELLULAR LOCATION, TISSUE
RP SPECIFICITY, AND DISRUPTION PHENOTYPE.
RX PubMed=19795213; DOI=10.1007/s11103-009-9551-5;
RA Cao X., Yang K.Z., Xia C., Zhang X.Q., Chen L.Q., Ye D.;
RT "Characterization of DUF724 gene family in Arabidopsis thaliana.";
RL Plant Mol. Biol. 72:61-73(2010).
CC -!- FUNCTION: May be involved in the polar growth of plant cells via
CC transportation of RNAs. {ECO:0000305|PubMed:19795213}.
CC -!- SUBUNIT: Homodimer. {ECO:0000269|PubMed:19795213}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000269|PubMed:19795213}.
CC -!- TISSUE SPECIFICITY: Expressed in leaves, flowers and siliques.
CC {ECO:0000269|PubMed:19795213}.
CC -!- DISRUPTION PHENOTYPE: No visible phenotype under normal growth
CC conditions. {ECO:0000269|PubMed:19795213}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAB63822.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC Sequence=AEC10815.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AC002337; AAB63822.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002685; AEC10815.1; ALT_SEQ; Genomic_DNA.
DR EMBL; AK229535; BAF01389.1; -; mRNA.
DR PIR; E84912; E84912.
DR RefSeq; NP_182244.2; NM_130290.2.
DR AlphaFoldDB; Q0WNB1; -.
DR SMR; Q0WNB1; -.
DR STRING; 3702.AT2G47220.1; -.
DR PRIDE; Q0WNB1; -.
DR GeneID; 819335; -.
DR KEGG; ath:AT2G47220; -.
DR Araport; AT2G47220; -.
DR TAIR; locus:2065165; AT2G47220.
DR eggNOG; KOG0725; Eukaryota.
DR eggNOG; KOG1067; Eukaryota.
DR OrthoDB; 211886at2759; -.
DR PhylomeDB; Q0WNB1; -.
DR PRO; PR:Q0WNB1; -.
DR Proteomes; UP000006548; Chromosome 2.
DR ExpressionAtlas; Q0WNB1; baseline and differential.
DR GO; GO:0009570; C:chloroplast stroma; HDA:TAIR.
DR GO; GO:0005634; C:nucleus; IDA:UniProtKB.
DR GO; GO:0042803; F:protein homodimerization activity; IPI:UniProtKB.
DR GO; GO:0040008; P:regulation of growth; IEA:UniProtKB-KW.
DR InterPro; IPR007930; DUF724.
DR Pfam; PF05266; DUF724; 1.
PE 1: Evidence at protein level;
KW Coiled coil; Growth regulation; Nucleus; Reference proteome; Transport.
FT CHAIN 1..243
FT /note="DUF724 domain-containing protein 5"
FT /id="PRO_0000436423"
FT DOMAIN 59..243
FT /note="DUF724"
FT /evidence="ECO:0000255"
FT REGION 1..51
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 174..223
FT /evidence="ECO:0000255"
FT COMPBIAS 1..23
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 243 AA; 28252 MW; DE688E4D221C85FF CRC64;
MREKHYSEDN SRKRKRGELE HNSDLNETVL PSDWTPDPVK NFAADDDDEE TKAKDATMVL
PFVKKSPVWK IYESMEVFKR VPQSPHFSPL FEAKEDFREG FALGMMVTFS GVLEKVEDLK
TDVPIRQLNS LKDSFTELEK HGFTVTAPLS RIAKLLALKD RQLKILEELK VFDKEMKDES
SKKHKAEQEF GEMERKILEV KNKVLELQKQ EAALEKQKDA TYEKICKMES RARDLGVELE
DVE