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DXO_MOUSE
ID   DXO_MOUSE               Reviewed;         397 AA.
AC   O70348; Q99KD8;
DT   19-SEP-2006, integrated into UniProtKB/Swiss-Prot.
DT   19-SEP-2006, sequence version 2.
DT   03-AUG-2022, entry version 122.
DE   RecName: Full=Decapping and exoribonuclease protein {ECO:0000303|PubMed:23523372};
DE            Short=DXO {ECO:0000303|PubMed:23523372};
DE            EC=3.6.1.- {ECO:0000269|PubMed:23523372};
DE   AltName: Full=5'-3' exoribonuclease DXO {ECO:0000305};
DE            EC=3.1.13.- {ECO:0000269|PubMed:23523372, ECO:0000269|PubMed:30180947};
DE   AltName: Full=Dom-3 homolog Z {ECO:0000303|PubMed:14656967};
DE   AltName: Full=NAD-capped RNA hydrolase DXO {ECO:0000305};
DE            Short=DeNADding enzyme DXO {ECO:0000305};
DE            EC=3.6.1.- {ECO:0000269|PubMed:28283058};
GN   Name=Dxo {ECO:0000303|PubMed:23523372};
GN   Synonyms=Dom3z {ECO:0000303|PubMed:14656967}, Ng6;
OS   Mus musculus (Mouse).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC   Murinae; Mus; Mus.
OX   NCBI_TaxID=10090;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=129;
RX   PubMed=14656967; DOI=10.1101/gr.1736803;
RA   Xie T., Rowen L., Aguado B., Ahearn M.E., Madan A., Qin S., Campbell R.D.,
RA   Hood L.;
RT   "Analysis of the gene-dense major histocompatibility complex class III
RT   region and its comparison to mouse.";
RL   Genome Res. 13:2621-2636(2003).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   STRAIN=FVB/N; TISSUE=Mammary gland;
RX   PubMed=15489334; DOI=10.1101/gr.2596504;
RG   The MGC Project Team;
RT   "The status, quality, and expansion of the NIH full-length cDNA project:
RT   the Mammalian Gene Collection (MGC).";
RL   Genome Res. 14:2121-2127(2004).
RN   [3]
RP   PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-394, AND IDENTIFICATION BY
RP   MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RC   TISSUE=Pancreas, and Testis;
RX   PubMed=21183079; DOI=10.1016/j.cell.2010.12.001;
RA   Huttlin E.L., Jedrychowski M.P., Elias J.E., Goswami T., Rad R.,
RA   Beausoleil S.A., Villen J., Haas W., Sowa M.E., Gygi S.P.;
RT   "A tissue-specific atlas of mouse protein phosphorylation and expression.";
RL   Cell 143:1174-1189(2010).
RN   [4]
RP   FUNCTION, AND CATALYTIC ACTIVITY.
RX   PubMed=32432673; DOI=10.1093/nar/gkaa402;
RA   Sharma S., Grudzien-Nogalska E., Hamilton K., Jiao X., Yang J., Tong L.,
RA   Kiledjian M.;
RT   "Mammalian Nudix proteins cleave nucleotide metabolite caps on RNAs.";
RL   Nucleic Acids Res. 48:6788-6798(2020).
RN   [5]
RP   X-RAY CRYSTALLOGRAPHY (2.01 ANGSTROMS) IN COMPLEX WITH GDP.
RX   PubMed=19194460; DOI=10.1038/nature07731;
RA   Xiang S., Cooper-Morgan A., Jiao X., Kiledjian M., Manley J.L., Tong L.;
RT   "Structure and function of the 5'-->3' exoribonuclease Rat1 and its
RT   activating partner Rai1.";
RL   Nature 458:784-788(2009).
RN   [6]
RP   X-RAY CRYSTALLOGRAPHY (1.50 ANGSTROMS) OF 27-397 IN COMPLEX WITH MAGNESIUM
RP   AND M(7)GPPPG CAP, FUNCTION, COFACTOR, CATALYTIC ACTIVITY, AND MUTAGENESIS
RP   OF GLU-234 AND ASP-236.
RX   PubMed=23523372; DOI=10.1016/j.molcel.2013.02.017;
RA   Jiao X., Chang J.H., Kilic T., Tong L., Kiledjian M.;
RT   "A mammalian pre-mRNA 5' end capping quality control mechanism and an
RT   unexpected link of capping to pre-mRNA processing.";
RL   Mol. Cell 50:104-115(2013).
RN   [7] {ECO:0007744|PDB:5ULI}
RP   X-RAY CRYSTALLOGRAPHY (2.10 ANGSTROMS) OF 27-384 IN COMPLEX WITH CALCIUM,
RP   FUNCTION, CATALYTIC ACTIVITY, AND MUTAGENESIS OF GLU-234 AND ASP-236.
RX   PubMed=28283058; DOI=10.1016/j.cell.2017.02.019;
RA   Jiao X., Doamekpor S.K., Bird J.G., Nickels B.E., Tong L., Hart R.P.,
RA   Kiledjian M.;
RT   "5' end nicotinamide adenine dinucleotide cap in human cells promotes RNA
RT   decay through DXO-mediated deNADding.";
RL   Cell 168:1015-1027(2017).
RN   [8] {ECO:0007744|PDB:6AIX, ECO:0007744|PDB:6AIY}
RP   X-RAY CRYSTALLOGRAPHY (1.80 ANGSTROMS) OF 27-384 IN COMPLEX WITH MAGNESIUM
RP   AND ADENOSINE 3',5'-BISPHOSPHATE, FUNCTION, ACTIVITY REGULATION, COFACTOR,
RP   AND MUTAGENESIS OF GLU-234.
RX   PubMed=30180947; DOI=10.1016/j.bbrc.2018.08.135;
RA   Yun J.S., Yoon J.H., Choi Y.J., Son Y.J., Kim S., Tong L., Chang J.H.;
RT   "Molecular mechanism for the inhibition of DXO by adenosine 3',5'-
RT   bisphosphate.";
RL   Biochem. Biophys. Res. Commun. 504:89-95(2018).
RN   [9]
RP   X-RAY CRYSTALLOGRAPHY (1.60 ANGSTROMS) OF IN COMPLEX WITH COA AND 3'-FADP,
RP   FUNCTION, AND CATALYTIC ACTIVITY.
RX   PubMed=32374864; DOI=10.1093/nar/gkaa297;
RA   Doamekpor S.K., Grudzien-Nogalska E., Mlynarska-Cieslak A., Kowalska J.,
RA   Kiledjian M., Tong L.;
RT   "DXO/Rai1 enzymes remove 5'-end FAD and dephospho-CoA caps on RNAs.";
RL   Nucleic Acids Res. 48:6136-6148(2020).
CC   -!- FUNCTION: Decapping enzyme for NAD-capped RNAs: specifically hydrolyzes
CC       the nicotinamide adenine dinucleotide (NAD) cap from a subset of RNAs
CC       by removing the entire NAD moiety from the 5'-end of an NAD-capped RNA
CC       (PubMed:28283058, PubMed:32374864). The NAD-cap is present at the 5'-
CC       end of some RNAs and snoRNAs (PubMed:28283058). In contrast to the
CC       canonical 5'-end N7 methylguanosine (m7G) cap, the NAD cap promotes
CC       mRNA decay (PubMed:28283058). Preferentially acts on NAD-capped
CC       transcripts in response to environmental stress (By similarity). Also
CC       acts as a non-canonical decapping enzyme that removes the entire cap
CC       structure of m7G capped or incompletely capped RNAs and mediates their
CC       subsequent degradation (PubMed:23523372, PubMed:28283058). Specifically
CC       degrades pre-mRNAs with a defective 5'-end m7G cap and is part of a
CC       pre-mRNA capping quality control (PubMed:23523372). Has decapping
CC       activity toward incomplete 5'-end m7G cap mRNAs such as unmethylated
CC       5'-end-capped RNA (cap0), while it has no activity toward 2'-O-ribose
CC       methylated m7G cap (cap1) (PubMed:23523372). In contrast to canonical
CC       decapping enzymes DCP2 and NUDT16, which cleave the cap within the
CC       triphosphate linkage, the decapping activity releases the entire cap
CC       structure GpppN and a 5'-end monophosphate RNA (PubMed:23523372). Also
CC       has 5'-3' exoribonuclease activities: The 5'-end monophosphate RNA is
CC       then degraded by the 5'-3' exoribonuclease activity, enabling this
CC       enzyme to decap and degrade incompletely capped mRNAs (PubMed:23523372,
CC       PubMed:30180947). Also possesses RNA 5'-pyrophosphohydrolase activity
CC       by hydrolyzing the 5'-end triphosphate to release pyrophosphates
CC       (PubMed:23523372). Exhibits decapping activity towards FAD-capped RNAs
CC       (PubMed:32432673, PubMed:32374864). Exhibits decapping activity towards
CC       dpCoA-capped RNAs in vitro (PubMed:32432673, PubMed:32374864).
CC       {ECO:0000250|UniProtKB:O77932, ECO:0000269|PubMed:23523372,
CC       ECO:0000269|PubMed:28283058, ECO:0000269|PubMed:30180947,
CC       ECO:0000269|PubMed:32374864, ECO:0000269|PubMed:32432673}.
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=a 5'-end NAD(+)-phospho-ribonucleoside in mRNA + H2O = a 5'-
CC         end phospho-ribonucleoside in mRNA + H(+) + NAD(+);
CC         Xref=Rhea:RHEA:60880, Rhea:RHEA-COMP:15692, Rhea:RHEA-COMP:15698,
CC         ChEBI:CHEBI:15377, ChEBI:CHEBI:15378, ChEBI:CHEBI:57540,
CC         ChEBI:CHEBI:138282, ChEBI:CHEBI:144029;
CC         Evidence={ECO:0000269|PubMed:28283058, ECO:0000269|PubMed:32374864};
CC       PhysiologicalDirection=left-to-right; Xref=Rhea:RHEA:60881;
CC         Evidence={ECO:0000269|PubMed:28283058};
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=a 5'-end NAD(+)-phospho-ribonucleoside in snoRNA + H2O = a 5'-
CC         end phospho-ribonucleoside in snoRNA + H(+) + NAD(+);
CC         Xref=Rhea:RHEA:60892, Rhea:RHEA-COMP:15699, Rhea:RHEA-COMP:15700,
CC         ChEBI:CHEBI:15377, ChEBI:CHEBI:15378, ChEBI:CHEBI:57540,
CC         ChEBI:CHEBI:138282, ChEBI:CHEBI:144029;
CC         Evidence={ECO:0000269|PubMed:28283058};
CC       PhysiologicalDirection=left-to-right; Xref=Rhea:RHEA:60893;
CC         Evidence={ECO:0000269|PubMed:28283058};
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=a 5'-end (N(7)-methyl 5'-triphosphoguanosine)-ribonucleoside-
CC         ribonucleotide in mRNA + H2O = a (N(7)-methyl 5'-triphospho-
CC         guanosine)-nucleoside + a 5'-end phospho-ribonucleoside in mRNA +
CC         H(+); Xref=Rhea:RHEA:66928, Rhea:RHEA-COMP:15692, Rhea:RHEA-
CC         COMP:17313, ChEBI:CHEBI:15377, ChEBI:CHEBI:15378, ChEBI:CHEBI:138282,
CC         ChEBI:CHEBI:172876, ChEBI:CHEBI:172877;
CC         Evidence={ECO:0000269|PubMed:23523372};
CC       PhysiologicalDirection=left-to-right; Xref=Rhea:RHEA:66929;
CC         Evidence={ECO:0000269|PubMed:23523372};
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=a 5'-end FAD-phospho-ribonucleoside in mRNA + H2O = a 5'-end
CC         phospho-ribonucleoside in mRNA + FAD + H(+); Xref=Rhea:RHEA:67492,
CC         Rhea:RHEA-COMP:15692, Rhea:RHEA-COMP:17275, ChEBI:CHEBI:15377,
CC         ChEBI:CHEBI:15378, ChEBI:CHEBI:57692, ChEBI:CHEBI:138282,
CC         ChEBI:CHEBI:172372; Evidence={ECO:0000269|PubMed:32374864,
CC         ECO:0000269|PubMed:32432673};
CC       PhysiologicalDirection=left-to-right; Xref=Rhea:RHEA:67493;
CC         Evidence={ECO:0000305|PubMed:32432673};
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=a 5'-end CoA-ribonucleoside in mRNA + H2O = 3'-dephospho-CoA +
CC         a 5'-end phospho-ribonucleoside in mRNA + H(+); Xref=Rhea:RHEA:67496,
CC         Rhea:RHEA-COMP:15692, Rhea:RHEA-COMP:17276, ChEBI:CHEBI:15377,
CC         ChEBI:CHEBI:15378, ChEBI:CHEBI:57328, ChEBI:CHEBI:138282,
CC         ChEBI:CHEBI:172371; Evidence={ECO:0000305|PubMed:32374864,
CC         ECO:0000305|PubMed:32432673};
CC       PhysiologicalDirection=left-to-right; Xref=Rhea:RHEA:67497;
CC         Evidence={ECO:0000305|PubMed:32432673};
CC   -!- COFACTOR:
CC       Name=Mg(2+); Xref=ChEBI:CHEBI:18420;
CC         Evidence={ECO:0000269|PubMed:23523372, ECO:0000269|PubMed:30180947};
CC       Note=Binds 2 magnesium ions. {ECO:0000269|PubMed:23523372,
CC       ECO:0000269|PubMed:30180947};
CC   -!- ACTIVITY REGULATION: The 5'-3' exoribonuclease activity is inhibited by
CC       adenosine 3',5'-bisphosphate. {ECO:0000269|PubMed:30180947}.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250|UniProtKB:O77932}.
CC   -!- SIMILARITY: Belongs to the DXO/Dom3Z family. {ECO:0000305}.
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DR   EMBL; AF049850; AAC05281.1; -; Genomic_DNA.
DR   EMBL; BC004713; AAH04713.1; -; mRNA.
DR   CCDS; CCDS28660.1; -.
DR   RefSeq; NP_001157242.1; NM_001163770.1.
DR   RefSeq; NP_291091.2; NM_033613.2.
DR   PDB; 3FQI; X-ray; 2.01 A; A=1-397.
DR   PDB; 3FQJ; X-ray; 2.62 A; A=1-397.
DR   PDB; 4J7L; X-ray; 1.80 A; A=27-384.
DR   PDB; 4J7M; X-ray; 1.70 A; A=27-384.
DR   PDB; 4J7N; X-ray; 1.50 A; A=27-384.
DR   PDB; 5ULI; X-ray; 2.10 A; A=27-384.
DR   PDB; 6AIX; X-ray; 1.80 A; A=27-384.
DR   PDB; 6AIY; X-ray; 1.90 A; A=27-384.
DR   PDB; 6WRE; X-ray; 2.00 A; A=27-384.
DR   PDB; 6WUF; X-ray; 1.60 A; A=1-397.
DR   PDB; 6WUK; X-ray; 1.60 A; A=1-397.
DR   PDBsum; 3FQI; -.
DR   PDBsum; 3FQJ; -.
DR   PDBsum; 4J7L; -.
DR   PDBsum; 4J7M; -.
DR   PDBsum; 4J7N; -.
DR   PDBsum; 5ULI; -.
DR   PDBsum; 6AIX; -.
DR   PDBsum; 6AIY; -.
DR   PDBsum; 6WRE; -.
DR   PDBsum; 6WUF; -.
DR   PDBsum; 6WUK; -.
DR   AlphaFoldDB; O70348; -.
DR   SMR; O70348; -.
DR   STRING; 10090.ENSMUSP00000047018; -.
DR   iPTMnet; O70348; -.
DR   PhosphoSitePlus; O70348; -.
DR   EPD; O70348; -.
DR   MaxQB; O70348; -.
DR   PaxDb; O70348; -.
DR   PRIDE; O70348; -.
DR   ProteomicsDB; 277793; -.
DR   GeneID; 112403; -.
DR   KEGG; mmu:112403; -.
DR   UCSC; uc008cdr.2; mouse.
DR   CTD; 1797; -.
DR   MGI; MGI:1890444; Dxo.
DR   eggNOG; KOG1982; Eukaryota.
DR   InParanoid; O70348; -.
DR   OrthoDB; 1034620at2759; -.
DR   PhylomeDB; O70348; -.
DR   TreeFam; TF322812; -.
DR   BioGRID-ORCS; 112403; 2 hits in 77 CRISPR screens.
DR   ChiTaRS; Dxo; mouse.
DR   EvolutionaryTrace; O70348; -.
DR   PRO; PR:O70348; -.
DR   Proteomes; UP000000589; Unplaced.
DR   RNAct; O70348; protein.
DR   GO; GO:0005829; C:cytosol; ISO:MGI.
DR   GO; GO:0005654; C:nucleoplasm; ISO:MGI.
DR   GO; GO:0005634; C:nucleus; ISS:UniProtKB.
DR   GO; GO:0005886; C:plasma membrane; ISO:MGI.
DR   GO; GO:0008409; F:5'-3' exonuclease activity; IDA:UniProtKB.
DR   GO; GO:0000287; F:magnesium ion binding; IDA:UniProtKB.
DR   GO; GO:0003729; F:mRNA binding; IDA:UniProtKB.
DR   GO; GO:0000166; F:nucleotide binding; IEA:UniProtKB-KW.
DR   GO; GO:0110152; F:RNA NAD-cap (NAD-forming) hydrolase activity; IDA:UniProtKB.
DR   GO; GO:0034353; F:RNA pyrophosphohydrolase activity; IDA:UniProtKB.
DR   GO; GO:0006402; P:mRNA catabolic process; IDA:UniProtKB.
DR   GO; GO:0110155; P:NAD-cap decapping; IDA:UniProtKB.
DR   GO; GO:0071028; P:nuclear mRNA surveillance; IMP:UniProtKB.
DR   GO; GO:0000956; P:nuclear-transcribed mRNA catabolic process; IBA:GO_Central.
DR   GO; GO:0090305; P:nucleic acid phosphodiester bond hydrolysis; IDA:UniProtKB.
DR   GO; GO:0050779; P:RNA destabilization; IMP:UniProtKB.
DR   InterPro; IPR013961; RAI1.
DR   InterPro; IPR039039; RAI1-like_fam.
DR   PANTHER; PTHR12395; PTHR12395; 1.
DR   Pfam; PF08652; RAI1; 1.
PE   1: Evidence at protein level;
KW   3D-structure; Exonuclease; Hydrolase; Magnesium; Metal-binding; Nuclease;
KW   Nucleotide-binding; Nucleus; Phosphoprotein; Reference proteome;
KW   RNA-binding.
FT   CHAIN           1..397
FT                   /note="Decapping and exoribonuclease protein"
FT                   /id="PRO_0000249823"
FT   REGION          1..30
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          253..256
FT                   /note="Adenosine 3',5'-bisphosphate; inhibitor"
FT                   /evidence="ECO:0000269|PubMed:30180947"
FT   COMPBIAS        1..19
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   BINDING         58
FT                   /ligand="substrate"
FT                   /evidence="ECO:0000269|PubMed:23523372,
FT                   ECO:0000269|PubMed:28283058"
FT   BINDING         101
FT                   /ligand="substrate"
FT                   /evidence="ECO:0000269|PubMed:23523372"
FT   BINDING         131..133
FT                   /ligand="substrate"
FT                   /evidence="ECO:0000269|PubMed:23523372,
FT                   ECO:0000269|PubMed:28283058"
FT   BINDING         185
FT                   /ligand="adenosine 3',5'-bisphosphate"
FT                   /ligand_id="ChEBI:CHEBI:58343"
FT                   /ligand_note="inhibitor"
FT                   /evidence="ECO:0000269|PubMed:30180947"
FT   BINDING         192
FT                   /ligand="Mg(2+)"
FT                   /ligand_id="ChEBI:CHEBI:18420"
FT                   /ligand_label="1"
FT                   /evidence="ECO:0000269|PubMed:23523372"
FT   BINDING         192
FT                   /ligand="Mg(2+)"
FT                   /ligand_id="ChEBI:CHEBI:18420"
FT                   /ligand_label="2"
FT                   /evidence="ECO:0000269|PubMed:23523372"
FT   BINDING         217
FT                   /ligand="substrate"
FT                   /evidence="ECO:0000269|PubMed:23523372"
FT   BINDING         234
FT                   /ligand="Mg(2+)"
FT                   /ligand_id="ChEBI:CHEBI:18420"
FT                   /ligand_label="2"
FT                   /evidence="ECO:0000269|PubMed:23523372,
FT                   ECO:0000269|PubMed:30180947"
FT   BINDING         234
FT                   /ligand="substrate"
FT                   /evidence="ECO:0000269|PubMed:23523372,
FT                   ECO:0000269|PubMed:28283058"
FT   BINDING         236
FT                   /ligand="adenosine 3',5'-bisphosphate"
FT                   /ligand_id="ChEBI:CHEBI:58343"
FT                   /ligand_note="inhibitor"
FT                   /evidence="ECO:0000269|PubMed:30180947"
FT   BINDING         236
FT                   /ligand="Mg(2+)"
FT                   /ligand_id="ChEBI:CHEBI:18420"
FT                   /ligand_label="1"
FT                   /evidence="ECO:0000269|PubMed:23523372,
FT                   ECO:0000269|PubMed:30180947, ECO:0000305|PubMed:28283058"
FT   BINDING         236
FT                   /ligand="Mg(2+)"
FT                   /ligand_id="ChEBI:CHEBI:18420"
FT                   /ligand_label="2"
FT                   /evidence="ECO:0000269|PubMed:23523372,
FT                   ECO:0000269|PubMed:30180947"
FT   BINDING         253
FT                   /ligand="Mg(2+)"
FT                   /ligand_id="ChEBI:CHEBI:18420"
FT                   /ligand_label="1"
FT                   /evidence="ECO:0000269|PubMed:23523372,
FT                   ECO:0000269|PubMed:30180947, ECO:0000305|PubMed:28283058"
FT   BINDING         254
FT                   /ligand="Mg(2+)"
FT                   /ligand_id="ChEBI:CHEBI:18420"
FT                   /ligand_label="1"
FT                   /evidence="ECO:0000269|PubMed:23523372,
FT                   ECO:0000269|PubMed:30180947, ECO:0000305|PubMed:28283058"
FT   BINDING         255
FT                   /ligand="substrate"
FT                   /evidence="ECO:0000269|PubMed:23523372,
FT                   ECO:0000269|PubMed:28283058"
FT   BINDING         280
FT                   /ligand="adenosine 3',5'-bisphosphate"
FT                   /ligand_id="ChEBI:CHEBI:58343"
FT                   /ligand_note="inhibitor"
FT                   /evidence="ECO:0000269|PubMed:30180947"
FT   BINDING         280
FT                   /ligand="substrate"
FT                   /evidence="ECO:0000269|PubMed:23523372,
FT                   ECO:0000269|PubMed:28283058"
FT   MOD_RES         392
FT                   /note="Phosphothreonine"
FT                   /evidence="ECO:0000250|UniProtKB:Q6MG77"
FT   MOD_RES         394
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:21183079"
FT   MUTAGEN         234
FT                   /note="E->A: Abolishes the decapping activity on both
FT                   incomplete m7G cap and NAD-cap RNAs. Abolishes the 5'-3'
FT                   exoribonuclease activity."
FT                   /evidence="ECO:0000269|PubMed:23523372,
FT                   ECO:0000269|PubMed:28283058, ECO:0000269|PubMed:30180947"
FT   MUTAGEN         236
FT                   /note="D->A: Abolishes the decapping activity on both
FT                   incomplete m7G cap and NAD-cap RNAs."
FT                   /evidence="ECO:0000269|PubMed:23523372,
FT                   ECO:0000269|PubMed:28283058"
FT   CONFLICT        20
FT                   /note="N -> H (in Ref. 1; AAC05281)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        28
FT                   /note="S -> L (in Ref. 1; AAC05281)"
FT                   /evidence="ECO:0000305"
FT   HELIX           33..35
FT                   /evidence="ECO:0007829|PDB:4J7N"
FT   STRAND          47..54
FT                   /evidence="ECO:0007829|PDB:4J7N"
FT   STRAND          60..64
FT                   /evidence="ECO:0007829|PDB:4J7N"
FT   STRAND          75..77
FT                   /evidence="ECO:0007829|PDB:6WUK"
FT   TURN            84..91
FT                   /evidence="ECO:0007829|PDB:4J7N"
FT   STRAND          97..99
FT                   /evidence="ECO:0007829|PDB:3FQJ"
FT   HELIX           104..113
FT                   /evidence="ECO:0007829|PDB:4J7N"
FT   HELIX           114..116
FT                   /evidence="ECO:0007829|PDB:4J7N"
FT   STRAND          118..120
FT                   /evidence="ECO:0007829|PDB:6AIY"
FT   TURN            121..123
FT                   /evidence="ECO:0007829|PDB:4J7N"
FT   HELIX           124..126
FT                   /evidence="ECO:0007829|PDB:4J7N"
FT   STRAND          128..131
FT                   /evidence="ECO:0007829|PDB:4J7N"
FT   HELIX           132..140
FT                   /evidence="ECO:0007829|PDB:4J7N"
FT   HELIX           141..143
FT                   /evidence="ECO:0007829|PDB:4J7N"
FT   STRAND          149..156
FT                   /evidence="ECO:0007829|PDB:4J7N"
FT   STRAND          159..164
FT                   /evidence="ECO:0007829|PDB:4J7N"
FT   HELIX           168..175
FT                   /evidence="ECO:0007829|PDB:4J7N"
FT   HELIX           179..195
FT                   /evidence="ECO:0007829|PDB:4J7N"
FT   STRAND          196..199
FT                   /evidence="ECO:0007829|PDB:4J7N"
FT   STRAND          215..224
FT                   /evidence="ECO:0007829|PDB:4J7N"
FT   STRAND          227..234
FT                   /evidence="ECO:0007829|PDB:4J7N"
FT   STRAND          242..244
FT                   /evidence="ECO:0007829|PDB:6WUK"
FT   TURN            247..250
FT                   /evidence="ECO:0007829|PDB:4J7N"
FT   STRAND          251..258
FT                   /evidence="ECO:0007829|PDB:4J7N"
FT   HELIX           263..271
FT                   /evidence="ECO:0007829|PDB:4J7N"
FT   HELIX           273..282
FT                   /evidence="ECO:0007829|PDB:4J7N"
FT   TURN            283..285
FT                   /evidence="ECO:0007829|PDB:4J7N"
FT   STRAND          288..294
FT                   /evidence="ECO:0007829|PDB:4J7N"
FT   STRAND          298..307
FT                   /evidence="ECO:0007829|PDB:4J7N"
FT   HELIX           308..315
FT                   /evidence="ECO:0007829|PDB:4J7N"
FT   HELIX           324..341
FT                   /evidence="ECO:0007829|PDB:4J7N"
FT   STRAND          349..355
FT                   /evidence="ECO:0007829|PDB:4J7N"
FT   STRAND          361..368
FT                   /evidence="ECO:0007829|PDB:4J7N"
FT   TURN            369..371
FT                   /evidence="ECO:0007829|PDB:4J7N"
FT   HELIX           376..383
FT                   /evidence="ECO:0007829|PDB:4J7N"
SQ   SEQUENCE   397 AA;  45280 MW;  02022DF0A77D503E CRC64;
     MEPRGTKRKA EKTEVEKPLN KLPRAVPSLR TQPSLYSGPF PFYRRPSELG CFSLDAQRQY
     HGDARALRYY SPPPINGPGP DFDLRDGYPD RYQPRDEEVQ ERLDHLLRWV LEHRNQLEGG
     PGWLAGATVT WRGHLTKLLT TPYERQEGWQ LAASRFQGTL YLSEVETPAA RAQRLARPPL
     LRELMYMGYK FEQYMCADKP GGSPDPSGEV NTNVAYCSVL RSRLGNHPLL FSGEVDCLNP
     QAPCTQPPSC YVELKTSKEM HSPGQWRSFY RHKLLKWWAQ SFLPGVPHVV AGFRNPEGFV
     CSLKTFPTME MFENVRNDRE GWNPSVCMNF CAAFLSFAQS TVVQDDPRLV HLFSWEPGGP
     VTVSVHRDAP YAFLPSWYVE TMTQDLPPLS KTPSPKD
 
 
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