DXR_ORIVU
ID DXR_ORIVU Reviewed; 106 AA.
AC H8ZW44;
DT 29-SEP-2021, integrated into UniProtKB/Swiss-Prot.
DT 16-MAY-2012, sequence version 1.
DT 03-AUG-2022, entry version 13.
DE RecName: Full=1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000303|PubMed:22387534};
DE EC=1.1.1.267 {ECO:0000250|UniProtKB:P45568};
DE Flags: Fragment;
GN Name=DXR {ECO:0000303|PubMed:22387534};
OS Origanum vulgare (Wild marjoram).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Origanum.
OX NCBI_TaxID=39352;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=cv. LNIV008;
RX PubMed=22387534; DOI=10.1016/j.ympev.2012.02.010;
RA Curto M.A., Puppo P., Ferreira D., Nogueira M., Meimberg H.;
RT "Development of phylogenetic markers from single-copy nuclear genes for
RT multi locus, species level analyses in the mint family (Lamiaceae).";
RL Mol. Phylogenet. Evol. 63:758-767(2012).
CC -!- FUNCTION: Enzyme of the plastid non-mevalonate pathway for isoprenoid
CC biosynthesis that catalyzes the NADP-dependent rearrangement and
CC reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-
CC erythritol 4-phosphate (MEP). Required for chloroplast development.
CC {ECO:0000250|UniProtKB:Q9XFS9}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=2-C-methyl-D-erythritol 4-phosphate + NADP(+) = 1-deoxy-D-
CC xylulose 5-phosphate + H(+) + NADPH; Xref=Rhea:RHEA:13717,
CC ChEBI:CHEBI:15378, ChEBI:CHEBI:57783, ChEBI:CHEBI:57792,
CC ChEBI:CHEBI:58262, ChEBI:CHEBI:58349; EC=1.1.1.267;
CC Evidence={ECO:0000250|UniProtKB:P45568};
CC PhysiologicalDirection=right-to-left; Xref=Rhea:RHEA:13719;
CC Evidence={ECO:0000250|UniProtKB:P45568};
CC -!- COFACTOR:
CC Name=a divalent metal cation; Xref=ChEBI:CHEBI:60240;
CC Evidence={ECO:0000250|UniProtKB:P45568};
CC -!- PATHWAY: Isoprenoid biosynthesis; isopentenyl diphosphate biosynthesis
CC via DXP pathway; isopentenyl diphosphate from 1-deoxy-D-xylulose 5-
CC phosphate: step 1/6. {ECO:0000305}.
CC -!- SUBCELLULAR LOCATION: Plastid, chloroplast stroma
CC {ECO:0000250|UniProtKB:Q9XFS9}.
CC -!- SIMILARITY: Belongs to the DXR family. {ECO:0000305}.
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DR EMBL; JN587739; AFD50369.1; -; Genomic_DNA.
DR SMR; H8ZW44; -.
DR UniPathway; UPA00056; UER00092.
DR GO; GO:0009570; C:chloroplast stroma; IEA:UniProtKB-SubCell.
DR GO; GO:0030604; F:1-deoxy-D-xylulose-5-phosphate reductoisomerase activity; IEA:InterPro.
DR GO; GO:0016853; F:isomerase activity; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0019288; P:isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway; IEA:UniProtKB-UniPathway.
DR InterPro; IPR003821; DXP_reductoisomerase.
DR InterPro; IPR013644; DXP_reductoisomerase_C.
DR PANTHER; PTHR30525; PTHR30525; 1.
DR Pfam; PF08436; DXP_redisom_C; 1.
PE 3: Inferred from homology;
KW Chloroplast; Isomerase; Metal-binding; Oxidoreductase; Plastid.
FT CHAIN <1..>106
FT /note="1-deoxy-D-xylulose 5-phosphate reductoisomerase"
FT /id="PRO_0000453305"
FT REGION 65..71
FT /note="Binding to substrate phosphate group"
FT /evidence="ECO:0000250|UniProtKB:P45568"
FT BINDING 3
FT /ligand="a divalent metal cation"
FT /ligand_id="ChEBI:CHEBI:60240"
FT /evidence="ECO:0000250|UniProtKB:P45568"
FT BINDING 5
FT /ligand="a divalent metal cation"
FT /ligand_id="ChEBI:CHEBI:60240"
FT /evidence="ECO:0000250|UniProtKB:P45568"
FT BINDING 5
FT /ligand="substrate"
FT /evidence="ECO:0000250|UniProtKB:P45568"
FT BINDING 29
FT /ligand="substrate"
FT /evidence="ECO:0000250|UniProtKB:P45568"
FT BINDING 52
FT /ligand="substrate"
FT /evidence="ECO:0000250|UniProtKB:P45568"
FT BINDING 74
FT /ligand="a divalent metal cation"
FT /ligand_id="ChEBI:CHEBI:60240"
FT /evidence="ECO:0000250|UniProtKB:P45568"
FT BINDING 74
FT /ligand="substrate"
FT /evidence="ECO:0000250|UniProtKB:P45568"
FT NON_TER 1
FT /evidence="ECO:0000312|EMBL:AFD50369.1"
FT NON_TER 106
FT /evidence="ECO:0000312|EMBL:AFD50369.1"
SQ SEQUENCE 106 AA; 11723 MW; EEB7307518AF1A80 CRC64;
PADSEHSAIF QCIQGLPEGA LRRIILTASG GAFRDLPVEK LKEVKVADAL KHPNWNMGKK
ITVDSATLFN KGLEVIEAHY LFGAEYDDIE IVIHPQSIIH SMVETQ