DYHB_CHLRE
ID DYHB_CHLRE Reviewed; 4568 AA.
AC Q39565;
DT 01-NOV-1997, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1997, sequence version 1.
DT 03-AUG-2022, entry version 87.
DE RecName: Full=Dynein beta chain, flagellar outer arm;
GN Name=ODA4; Synonyms=ODA-4, SUP1;
OS Chlamydomonas reinhardtii (Chlamydomonas smithii).
OC Eukaryota; Viridiplantae; Chlorophyta; core chlorophytes; Chlorophyceae;
OC CS clade; Chlamydomonadales; Chlamydomonadaceae; Chlamydomonas.
OX NCBI_TaxID=3055;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=21gr / CC-1690;
RX PubMed=8006077; DOI=10.1242/jcs.107.3.635;
RA Mitchell D.R., Brown K.S.;
RT "Sequence analysis of the Chlamydomonas alpha and beta dynein heavy chain
RT genes.";
RL J. Cell Sci. 107:635-644(1994).
CC -!- FUNCTION: Force generating protein of eukaryotic cilia and flagella.
CC Produces force towards the minus ends of microtubules. Dynein has
CC ATPase activity; the force-producing power stroke is thought to occur
CC on release of ADP.
CC -!- SUBUNIT: Consists of at least 3 heavy chains (alpha, beta and gamma), 2
CC intermediate chains and 8 light chains.
CC -!- SUBCELLULAR LOCATION: Cell projection, cilium, flagellum. Cytoplasm,
CC cytoskeleton, flagellum axoneme.
CC -!- DOMAIN: Dynein heavy chains probably consist of an N-terminal stem
CC (which binds cargo and interacts with other dynein components), and the
CC head or motor domain. The motor contains six tandemly-linked AAA
CC domains in the head, which form a ring. A stalk-like structure (formed
CC by two of the coiled coil domains) protrudes between AAA 4 and AAA 5
CC and terminates in a microtubule-binding site. A seventh domain may also
CC contribute to this ring; it is not clear whether the N-terminus or the
CC C-terminus forms this extra domain. There are four well-conserved and
CC two non-conserved ATPase sites, one per AAA domain. Probably only one
CC of these (within AAA 1) actually hydrolyzes ATP, the others may serve a
CC regulatory function.
CC -!- SIMILARITY: Belongs to the dynein heavy chain family. {ECO:0000305}.
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DR EMBL; U02963; AAA19956.1; -; Genomic_DNA.
DR PIR; T08030; T08030.
DR SMR; Q39565; -.
DR STRING; 3055.EDP01834; -.
DR PRIDE; Q39565; -.
DR eggNOG; KOG3595; Eukaryota.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.
DR GO; GO:0030286; C:dynein complex; IEA:UniProtKB-KW.
DR GO; GO:0005874; C:microtubule; IEA:UniProtKB-KW.
DR GO; GO:0031514; C:motile cilium; IEA:UniProtKB-SubCell.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0045505; F:dynein intermediate chain binding; IEA:InterPro.
DR GO; GO:0051959; F:dynein light intermediate chain binding; IEA:InterPro.
DR GO; GO:0008569; F:minus-end-directed microtubule motor activity; IEA:InterPro.
DR GO; GO:0030030; P:cell projection organization; IEA:UniProtKB-KW.
DR GO; GO:0007018; P:microtubule-based movement; IEA:InterPro.
DR Gene3D; 1.10.8.710; -; 1.
DR Gene3D; 1.10.8.720; -; 1.
DR Gene3D; 1.20.140.100; -; 1.
DR Gene3D; 3.10.490.20; -; 1.
DR Gene3D; 3.20.180.20; -; 1.
DR Gene3D; 3.40.50.300; -; 5.
DR InterPro; IPR035699; AAA_6.
DR InterPro; IPR035706; AAA_9.
DR InterPro; IPR041658; AAA_lid_11.
DR InterPro; IPR042219; AAA_lid_11_sf.
DR InterPro; IPR026983; DHC_fam.
DR InterPro; IPR041589; DNAH3_AAA_lid_1.
DR InterPro; IPR042222; Dynein_2_N.
DR InterPro; IPR043157; Dynein_AAA1S.
DR InterPro; IPR041466; Dynein_AAA5_ext.
DR InterPro; IPR041228; Dynein_C.
DR InterPro; IPR043160; Dynein_C_barrel.
DR InterPro; IPR024743; Dynein_HC_stalk.
DR InterPro; IPR024317; Dynein_heavy_chain_D4_dom.
DR InterPro; IPR004273; Dynein_heavy_D6_P-loop.
DR InterPro; IPR013602; Dynein_heavy_linker.
DR InterPro; IPR013594; Dynein_heavy_tail.
DR InterPro; IPR042228; Dynein_linker_3.
DR InterPro; IPR027417; P-loop_NTPase.
DR PANTHER; PTHR10676; PTHR10676; 1.
DR Pfam; PF12774; AAA_6; 1.
DR Pfam; PF12780; AAA_8; 1.
DR Pfam; PF12781; AAA_9; 1.
DR Pfam; PF17857; AAA_lid_1; 1.
DR Pfam; PF18198; AAA_lid_11; 1.
DR Pfam; PF08385; DHC_N1; 1.
DR Pfam; PF08393; DHC_N2; 1.
DR Pfam; PF17852; Dynein_AAA_lid; 1.
DR Pfam; PF18199; Dynein_C; 1.
DR Pfam; PF03028; Dynein_heavy; 1.
DR Pfam; PF12777; MT; 1.
DR SUPFAM; SSF52540; SSF52540; 4.
PE 3: Inferred from homology;
KW ATP-binding; Cell projection; Cilium; Cilium biogenesis/degradation;
KW Coiled coil; Cytoplasm; Cytoskeleton; Dynein; Flagellum; Microtubule;
KW Motor protein; Nucleotide-binding; Repeat.
FT CHAIN 1..4568
FT /note="Dynein beta chain, flagellar outer arm"
FT /id="PRO_0000114649"
FT REGION 1..1880
FT /note="Stem"
FT /evidence="ECO:0000250"
FT REGION 1144..1166
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1881..2102
FT /note="AAA 1"
FT /evidence="ECO:0000250"
FT REGION 2164..2385
FT /note="AAA 2"
FT /evidence="ECO:0000250"
FT REGION 2493..2738
FT /note="AAA 3"
FT /evidence="ECO:0000250"
FT REGION 2841..3090
FT /note="AAA 4"
FT /evidence="ECO:0000250"
FT REGION 3106..3425
FT /note="Stalk"
FT /evidence="ECO:0000250"
FT REGION 3481..3711
FT /note="AAA 5"
FT /evidence="ECO:0000250"
FT REGION 3937..4172
FT /note="AAA 6"
FT /evidence="ECO:0000250"
FT COILED 277..293
FT /evidence="ECO:0000255"
FT COILED 1158..1175
FT /evidence="ECO:0000255"
FT COILED 1372..1400
FT /evidence="ECO:0000255"
FT COILED 1614..1650
FT /evidence="ECO:0000255"
FT COILED 1778..1825
FT /evidence="ECO:0000255"
FT COILED 2831..2848
FT /evidence="ECO:0000255"
FT COILED 3106..3162
FT /evidence="ECO:0000255"
FT COILED 3339..3425
FT /evidence="ECO:0000255"
FT COILED 3648..3728
FT /evidence="ECO:0000255"
FT BINDING 1919..1926
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000255"
FT BINDING 2202..2209
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000255"
FT BINDING 2530..2537
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000255"
FT BINDING 2879..2886
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000255"
SQ SEQUENCE 4568 AA; 519972 MW; 9A9A5393C7C36AE7 CRC64;
MAEDEGMTAA APSSSVKDIR FDYIRDRVCS CLKVPDSAYD KLVSGDGRTS LVQFMEEAHT
KRLLIMLDGK DLSATVKPPP KFKKKTVYFL KLQETKLDND NIKKLVIHGE ISENPLETLA
AISQDVFMPV LTAPANQQGW PDVVAKEVTE NLHKFVSNVF VTIGQMKGQT LLPLPPQNTV
PTLQPEQSMH SLKDQDKIHI LESAIVTWTK QIKNVLKADP DAPLKEPGAY PGPLTELNFW
SERAANLNSI HEQLTSEKTQ KVVKVLELAK STYYPAFQRL FREVEAAQQE ANDNVKFLKP
LRKYLDKLNM MDDFPMLVDL FKPIMHTLML IWKHSKSYNS STRFVTLMQE ICNDLIMQAC
KYVPGSDLIQ MEPSEAVDKL RMTLRWLGTF KNYYFEYRAL SMQDTPENPW KFQNNSLFAR
LDSFLERCHD MMDLMSTCMQ FNRLERVEIG GTKGKVLTNG VKAIHQDFTS AVEKFQQVTY
DVMDVDAKQF DEDFFGFRVV IKELERRLAA IIIQAFDDCT TIGTTFKLLD SFEGLLDREV
IAHDLEKKHT DLLHSYARDL KDVADLFHQY KDRPIVAKNS APYSGAAYWV RGLMERIKDP
MDRLLTMNKM VLESELFREI QRTYDHLWEE MTEYRTRAVD AWCAQVAATS DEKLNLPLLS
LIEETADGIR VLGVNFDPAL VRLLRETKYF LLLETSTQDK NADRNAEKAA EGGEVEVVKK
APKLSVPDSA KDLFASADTF RQQISALDLI CSIYNKVQRT ILAVEKPLVQ QKLDAVEQAL
NRGLAELNWK CAEIDTYIKE CMELVKDVDL VLNTIKDNVK ATQGILAMWE KNLMFERKDG
KTYTFDELND AFNQLIQQRH SEIRDAGKEI TKLLSSSNRV LKVSKGAASW RAYVDYFSNI
VIDGFSAAII STVRYLLSQI DPDILAKTES SPLLEIQVEL VAPDIVWKPD LGEGGAKPGL
RDMIKKWLQS FLEIGQLMKR LDVGEGNYAK ELEEDFEVYD ALNQVMMVTL ANESRCEDFK
NQFAKFDYLW KQDLQATLQQ FITDNGVTLP DGTRDDPPLA KFEEQIVKYK NVASEIASFK
DTMTMGYVKV NAKPLRQALS TWASKWVYLF THYLQEKVVN SITELYTFMD TSNSTLDLKV
MGEGVEEEPE YHPDQDPEEA AAKKAAEEEE KRKALYAIMA CMRDIRRRTE RGTDTMFEPL
KETVTALHTF GIQLSDTVLH QLDNAEFNWR TLKKKMLNRR EQLAPLQQAE AVEIRRKSDA
FNERVEDFRT FFQRKAPFAV SGGELKLEQV KPAYKLLDEF RSGSLEGYPS VLGIIAESKQ
LQEAQDLFEL YQPGYLQLQR CSEELGHLKS LWDTVGTVMF TFRDWYKTPW DKIDVDFLVE
ETKKLSKDIK MLNKAVRNYD VYRMLEEAIK AVLTSLPLVQ DLHHPAMRER HWKLLMQTTG
KHFVMDDKFC LGDLLALELH NYVDACSEIV DRAQKELNIE KQLKKIEDTW AGLSLAFSTY
QDSDVMALLV DDAVNEALEA DNLQLQNLSG QKYVQSNPMF LETVSKWQNN MGRVSAVLET
WQNVQKKWQN LESIFIGSAD IRVQLPEDSK RFDAVNADFQ ELMRTAPDIT NVVEACTLDG
RQERLENMQS MLEQCEKALQ EYLETKRVAF PRFYFVSPAD LLDILSKGSN PQLILRHLQK
CFDNIDNLSF RKDERGDPTK IATHMHSKEG EVVEFVEDCS CDGPVEVWLQ NVVDSMKLAL
QVEFRKAIPT YDELPRTKWI YVYSAQNTVV VSRTFFTQEI NEAFDDLEEG NEEALKVELD
RQVQQLADLI DEINKEQTSL DRKKLITLCT IDVHSRDLVQ KLIDERVEDQ MCFQWQSQLR
YIQSEKTKTC QVNICDAEIA YSYEYIGNCG CLCITPLTDR CFITLTQAQR LVLGGAPAGP
AGTGKTETTK DLARALGIQC YVFNCSDQMD YKAMGHTYKG LAQTGAWGCF DEFNRIPVAV
LSVCSTQYKT VLDAIRAKKE RFTFEDADIS LKSTVMAFIT MNPGYPGRAE LPESLKALFR
PVSMVVPDLA LICEIMLMAE GFQMSKILSR KFVILYKLCE DLLSKSRHYD WKLRAIKTTL
YVAGGMKRAA PELSEDKVLL RALRDFNLGK LTADDTSIFM GLLNDLFPKT LELVPRALDK
AFDEAAHKAA TELGYQPDDQ FLLKISHVRE LFVVRWSVFL LGAAGCGKTA VWRTLLRAQN
SSGEKTIYQA VNPKAVTRNE LYGYLHPATR EWKEGLMSVT FRNMANNKTN KHQWIVLDGD
IDAEWIESMN TVMDDNKMLT LASNERIPLT PSMRLLLEIN HMVHCSPATV SRGGVIFINA
DDVGWQPVVA SWIDKLEAAE YRPLLTALFT KYVDPCLEHC RRNFKTVVPL PAVNQAMTIC
KILEGILPKE TVRGAPPPDK KLLHYHFVFA CVWAFGGCML VDKVTDYRTQ FSKWWVSEWK
DVQFPEKGLV YDYYVDEQNC IMVPWEDRVT KFQYIPGDFT SLFVPTVETT RLTYFLDSLV
SNKHYAMFVG NTGTGKSAIM VNKLRNMDTE TMSFYTINMN SLSEAPALQV ILEQPLEKKS
GVRYGPPGSR RMVYFVDDMN MPLVDKYDTQ SSIELLRQMV DYHGWYDKVK IQLKEIINCQ
MAACMNPTAG SFNITPRMQR HFVTFAVQMP NAEITRAMYY QIIDGHFSSF DVDVAKMSNK
LVDATCELHR NVMHNFLPSA VKFHYQFNLR DLSNITQGLT RAIKEYYREP VKVARLWVHE
CERVFRDRMI NEADMAKFDE FRVAVTKKFF DDCGGMVAIE ERPLIYASHA SMTYTPEDVP
VYNALSSYDV LRKTLEDKLR EYNESNAVMD LVLFQQAMEH VTRIARIIDL PRGNAMLVGV
GGSGKQSLAR LASYICGYEV YQISVSSTYG INDFKENLLG LYRKAGTKGT PITFLMTDNQ
IVKEGFLVYI NDLLSTGYIA DLFTPEDKEA FTNAVRNEVK AAGILDSAEN CWDFFIDKVR
KFLHIVLCFS PVGDKFRIRA RQFPALVNCT MFDWFHGWPG EALVSVAQRF LVDVPNMEEV
VRENIAYHMA YAHQCVSEAS ERFKEAFRRY NYTTPKSYLE LISLYKMLLQ LKRDDLRRSK
ERLENGIDKI AQAAAQVTDL QRVLKEEQIV VDEKKAQTDE LIVSIGKEKA IVDQAVEAGR
EDEEAATALQ TEVSAFQAEC ERDLLEAEPI IAQAEAALNS LNKKELSELK SFGSPAAEIV
QVAAACLVLT CGGKIPKDRD WNAGKKMMAD VNSFLSSLMN FDKDNVPVVC VEVVEKDYIS
NPGFTPDNIK GKSAACAGLC SWVINICKYF RIYQVVAPKR AALAEANKKL DTANKKLKVI
RDEVKRLQDR VALLEQSLMK ATEDKNAAIA QADRTARKAQ MAERLINGLS GENTRWGAEI
KRLESLEGRL VGDVLIASAF VSYAGPFNMQ FRKSLVDEKW LPDIIERQIP MTQGIRPLDL
LTDDATKAKW ANEGLPTDPL SVENGAIMSN ASRWALMIDP QLQGIKWIIN KETNNGLVII
QQSQPKYIDQ VINCIENGWP LLIENLPVDI DAVLDPVIGK MTIKKGRNII MKIGDAEVQY
DSRFRLYLQT KLSNPHFKPE VAAQTTLVNF CVTEKGLEDQ LLALVVDHER PDLQEQAAGL
VRSLNEYNIT LVELENNLLF NLANATGNIL ENIELIEGLE ETKRTAVEIE EKVKLAKQTE
IQIAKAREVY RPVATRGSLT YFLIDNLNAL DRVYHYSMAN FVFVLKKGMD MTPGGKDESK
VPLAERLNQE VDLDKRVELL VETTCFVLIG YVAQGLFERH KLIVATQLCM QILRSRGELH
YAKFEYLLRG PKVMGADNPL HDWVSDSVWG SVQALKELDD YQGLPEDLIG SSKRWREWME
LERPEDEPLP GDWKRMQEFD KLLLFRALRP DRLTSAMGRF VTNMLGAKYV TSQPYDLERS
YQDASPGTPI FVFLSPGVDV AGSVEALGKK LGFTLDNGKY ASVSLGQGQE PIAMDRLSAA
HKNGGWVLLQ NIHLTIDWTT NQLDKKVDKL VEGAHPDFRL FLSAEPPPSL ERGLPISLLQ
NSIKLTNEPA RGLKANLRRA WNNFNEEILE SCAKQAEFRA IVFALCYFHA ALLERKKFGV
GNLPGARSGI GWNMNYPFNT GDLLCCGQTA NNYLENNVKV PWEDLRYNFG EIMYGGHIVE
DYDRRLAMCY LRKYVNEGLL DNMEFFPGFA MPPNTANHRQ VLEFIDEVMP PETPLAFGLH
PNAEIGFKLR EAESFCNSLV QLQPRESSGE GGMSAEERAK LVLDEVVDKL PDIFDMEDVR
SKINPDDPNM PFVMVAIQES ERMNMLLAEM KRSLLELDLG LKGDLTMTEP MERLLKALAT
DAVPGSWRNL AYPSLRPLGS WLGNLLARHA QLVDWTAELS TPKAVWLSGL FNPQSFLTAV
MQATARRNDW PLDKTVIITE VTKKQPDQIE ANSRDGAFIH GLTLEGARWD DKIGALDDSK
PKELFCPMPV ILVRAVTQDK AEMKDVYKCP VYTTEARFRE EVFEAQLKSK HTEIKWVLAG
VCLFLDVV