DYP_BRELN
ID DYP_BRELN Reviewed; 367 AA.
AC A0A3T0E4B9;
DT 25-MAY-2022, integrated into UniProtKB/Swiss-Prot.
DT 08-MAY-2019, sequence version 1.
DT 03-AUG-2022, entry version 9.
DE RecName: Full=Dye-decolorizing peroxidase {ECO:0000303|PubMed:19172747};
DE Short=DyP {ECO:0000303|PubMed:19172747};
DE EC=1.11.1.- {ECO:0000250|UniProtKB:P76536};
GN ORFNames=CXR29_00095;
OS Brevibacterium linens.
OC Bacteria; Actinobacteria; Micrococcales; Brevibacteriaceae; Brevibacterium.
OX NCBI_TaxID=1703;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 19391;
RX PubMed=31244798; DOI=10.3389/fmicb.2019.01270;
RA Levesque S., de Melo A.G., Labrie S.J., Moineau S.;
RT "Mobilome of Brevibacterium aurantiacum Sheds Light on Its Genetic
RT Diversity and Its Adaptation to Smear-Ripened Cheeses.";
RL Front. Microbiol. 10:1270-1270(2019).
RN [2]
RP PROBABLE SUBUNIT, SUBCELLULAR LOCATION, AND DOMAIN.
RC STRAIN=M18;
RX PubMed=19172747; DOI=10.1038/nsmb.1473;
RA Sutter M., Boehringer D., Gutmann S., Gunther S., Prangishvili D.,
RA Loessner M.J., Stetter K.O., Weber-Ban E., Ban N.;
RT "Structural basis of enzyme encapsulation into a bacterial
RT nanocompartment.";
RL Nat. Struct. Mol. Biol. 15:939-947(2008).
CC -!- FUNCTION: Cargo protein of a type 1 encapsulin nanocompartment. Has
CC both general peroxidase activity and dye-decolorizing activity. Can
CC catalyze the oxidation of both protoporphyrinogen IX and
CC coproporphyrinogen III to their corresponding porphyrins. Also
CC efficiently decolorizes the dyes alizarin red and Cibacron blue F3GA
CC (By similarity). This cargo-loaded encapsulin nanocompartment is
CC probably involved in protection against oxidative damage (By
CC similarity). {ECO:0000250|UniProtKB:I6WZG6,
CC ECO:0000250|UniProtKB:P76536}.
CC -!- COFACTOR:
CC Name=heme b; Xref=ChEBI:CHEBI:60344;
CC Evidence={ECO:0000250|UniProtKB:P76536};
CC -!- SUBUNIT: Homohexamer. {ECO:0000305|PubMed:19172747}.
CC -!- SUBCELLULAR LOCATION: Encapsulin nanocompartment
CC {ECO:0000269|PubMed:19172747}.
CC -!- DOMAIN: The C-terminus (at least 10 residues, not detailed in paper)
CC targets the protein to the nanocompartment.
CC {ECO:0000305|PubMed:19172747}.
CC -!- SIMILARITY: Belongs to the DyP-type peroxidase family. {ECO:0000305}.
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DR EMBL; CP026734; AZU02205.1; -; Genomic_DNA.
DR EnsemblBacteria; AZU02205; AZU02205; CXR29_00095.
DR Proteomes; UP000282883; Chromosome.
DR GO; GO:0140737; C:encapsulin nanocompartment; IDA:UniProtKB.
DR GO; GO:0020037; F:heme binding; IEA:InterPro.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0004601; F:peroxidase activity; IEA:UniProtKB-KW.
DR InterPro; IPR011008; Dimeric_a/b-barrel.
DR InterPro; IPR006314; Dyp_peroxidase.
DR Pfam; PF04261; Dyp_perox; 1.
DR SUPFAM; SSF54909; SSF54909; 1.
DR TIGRFAMs; TIGR01413; Dyp_perox_fam; 1.
DR PROSITE; PS51404; DYP_PEROXIDASE; 1.
PE 1: Evidence at protein level;
KW Encapsulin nanocompartment; Heme; Iron; Metal-binding; Oxidoreductase;
KW Peroxidase.
FT CHAIN 1..367
FT /note="Dye-decolorizing peroxidase"
FT /id="PRO_0000455325"
FT REGION 311..367
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 358..365
FT /note="Targeting peptide"
FT /evidence="ECO:0000305|PubMed:19172747"
FT ACT_SITE 152
FT /note="Proton acceptor"
FT /evidence="ECO:0000250|UniProtKB:Q47KB1"
FT BINDING 225
FT /ligand="heme"
FT /ligand_id="ChEBI:CHEBI:30413"
FT /ligand_part="Fe"
FT /ligand_part_id="ChEBI:CHEBI:18248"
FT /note="proximal binding residue"
FT /evidence="ECO:0000250|UniProtKB:Q47KB1"
SQ SEQUENCE 367 AA; 39926 MW; 70AF1BF5D5446BB9 CRC64;
MTEAFPNGKT PQHVLGPPAP AAVFLVLTVR SGAEAEAKDF LGDIAGVVRS VGFRAREDHL
SCVTGIGAEL WDRMFDAPRP AGLHPFIEQR GDVHTAPSTP GDLLFHIRAR RMDLCFELAR
QLVGELGDAV SVVDEVHGFR YFDERDIMGF VDGTENPEDQ EAVDSVFTPT GGDDPASSTY
VIVQKYTHDM AAWEALSVED QEAAFGRHKL SDMEFPDEDK APNSHLILNT IEDEDGTEHK
IVRDNMVFGS VESGEFGTYF IGYAADVSVT EQMLENMFIG NPRGTYDRIL DFSTAQTGGL
FFVPSQDFLD DPDGELAAAE PSDAQNDDPA SASARIEETD PPNPASADDP APADDSLGIG
SLRRRDQ