E2204_ARATH
ID E2204_ARATH Reviewed; 329 AA.
AC Q9LM50; Q8LFT0;
DT 10-FEB-2009, integrated into UniProtKB/Swiss-Prot.
DT 10-FEB-2009, sequence version 2.
DT 03-AUG-2022, entry version 81.
DE RecName: Full=UPF0725 protein EMB2204;
DE AltName: Full=Protein EMBRYO DEFECTIVE 2204;
GN Name=EMB2204; OrderedLocusNames=At1g22090; ORFNames=F2E2.16;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RA Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B.,
RA Feldmann K.A.;
RT "Full-length cDNA from Arabidopsis thaliana.";
RL Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP FUNCTION.
RX PubMed=15266054; DOI=10.1104/pp.104.045179;
RA Tzafrir I., Pena-Muralla R., Dickerman A., Berg M., Rogers R., Hutchens S.,
RA Sweeney T.C., McElver J., Aux G., Patton D., Meinke D.;
RT "Identification of genes required for embryo development in Arabidopsis.";
RL Plant Physiol. 135:1206-1220(2004).
CC -!- FUNCTION: May be involved in embryogenesis.
CC {ECO:0000269|PubMed:15266054}.
CC -!- SIMILARITY: Belongs to the UPF0725 (EMB2204) family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAF86551.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AC069252; AAF86551.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002684; AEE30196.1; -; Genomic_DNA.
DR EMBL; AY084660; AAM61223.1; -; mRNA.
DR PIR; G86353; G86353.
DR RefSeq; NP_564157.1; NM_102059.2.
DR AlphaFoldDB; Q9LM50; -.
DR SMR; Q9LM50; -.
DR PaxDb; Q9LM50; -.
DR PRIDE; Q9LM50; -.
DR ProteomicsDB; 221957; -.
DR EnsemblPlants; AT1G22090.1; AT1G22090.1; AT1G22090.
DR GeneID; 838814; -.
DR Gramene; AT1G22090.1; AT1G22090.1; AT1G22090.
DR KEGG; ath:AT1G22090; -.
DR Araport; AT1G22090; -.
DR TAIR; locus:2030576; AT1G22090.
DR HOGENOM; CLU_053767_0_0_1; -.
DR OMA; ESEYDYM; -.
DR OrthoDB; 1102648at2759; -.
DR PhylomeDB; Q9LM50; -.
DR PRO; PR:Q9LM50; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q9LM50; baseline and differential.
DR Genevisible; Q9LM50; AT.
DR InterPro; IPR006462; MS5.
DR PANTHER; PTHR31260; PTHR31260; 1.
DR Pfam; PF04776; protein_MS5; 1.
DR TIGRFAMs; TIGR01572; A_thl_para_3677; 1.
PE 2: Evidence at transcript level;
KW Developmental protein; Reference proteome.
FT CHAIN 1..329
FT /note="UPF0725 protein EMB2204"
FT /id="PRO_0000363132"
FT CONFLICT 254
FT /note="K -> R (in Ref. 3; AAM61223)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 329 AA; 38640 MW; 5FF8E2DF0D9B06AD CRC64;
MSRRVEYTLA PPQRNESDGF DYPDGIPISY NLHRLRHFEC EGSYPKYPYG SLVKFYAMVG
LHRYNVLEGK NLQLDTLKSF NMRINCGASS YYITLAARVP DSGLKQIFQV LVHEERLGSL
DMTCTIARPR VTTNVPFLRP HSESEYDYMD NDELPDWPSE IAFDDTKRFH LVKESELRDN
DWIRLYLELT LVAHDRFLTV HYLSQLEIVK VAIEEVEQPN ASLNTKTTFV YITYKDLAKA
QIGEPVDRKA IVRKIINETT GLLRLRGDYW SGERSVITPE EEYMLLHGGE KVRNNEQRSK
KLKRRVGVHR LWRWWYQAYK NRGLRSSSY