EBLN2_HUMAN
ID EBLN2_HUMAN Reviewed; 272 AA.
AC Q6P2I7; Q8WWH3; Q9NW89;
DT 16-DEC-2008, integrated into UniProtKB/Swiss-Prot.
DT 05-JUL-2004, sequence version 1.
DT 03-AUG-2022, entry version 116.
DE RecName: Full=Endogenous Bornavirus-like nucleoprotein 2;
DE AltName: Full=Endogenous Borna-like N element-2;
DE Short=EBLN-2;
GN Name=EBLN2; ORFNames=GK006;
OS Homo sapiens (Human).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
OX NCBI_TaxID=9606;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Hepatoma;
RA Xu X., Huang J., Rong Y., Xiao H., Chen Z., Han Z.;
RL Submitted (MAY-2001) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=16641997; DOI=10.1038/nature04728;
RA Muzny D.M., Scherer S.E., Kaul R., Wang J., Yu J., Sudbrak R., Buhay C.J.,
RA Chen R., Cree A., Ding Y., Dugan-Rocha S., Gill R., Gunaratne P.,
RA Harris R.A., Hawes A.C., Hernandez J., Hodgson A.V., Hume J., Jackson A.,
RA Khan Z.M., Kovar-Smith C., Lewis L.R., Lozado R.J., Metzker M.L.,
RA Milosavljevic A., Miner G.R., Morgan M.B., Nazareth L.V., Scott G.,
RA Sodergren E., Song X.-Z., Steffen D., Wei S., Wheeler D.A., Wright M.W.,
RA Worley K.C., Yuan Y., Zhang Z., Adams C.Q., Ansari-Lari M.A., Ayele M.,
RA Brown M.J., Chen G., Chen Z., Clendenning J., Clerc-Blankenburg K.P.,
RA Chen R., Chen Z., Davis C., Delgado O., Dinh H.H., Dong W., Draper H.,
RA Ernst S., Fu G., Gonzalez-Garay M.L., Garcia D.K., Gillett W., Gu J.,
RA Hao B., Haugen E., Havlak P., He X., Hennig S., Hu S., Huang W.,
RA Jackson L.R., Jacob L.S., Kelly S.H., Kube M., Levy R., Li Z., Liu B.,
RA Liu J., Liu W., Lu J., Maheshwari M., Nguyen B.-V., Okwuonu G.O.,
RA Palmeiri A., Pasternak S., Perez L.M., Phelps K.A., Plopper F.J., Qiang B.,
RA Raymond C., Rodriguez R., Saenphimmachak C., Santibanez J., Shen H.,
RA Shen Y., Subramanian S., Tabor P.E., Verduzco D., Waldron L., Wang J.,
RA Wang J., Wang Q., Williams G.A., Wong G.K.-S., Yao Z., Zhang J., Zhang X.,
RA Zhao G., Zhou J., Zhou Y., Nelson D., Lehrach H., Reinhardt R.,
RA Naylor S.L., Yang H., Olson M., Weinstock G., Gibbs R.A.;
RT "The DNA sequence, annotation and analysis of human chromosome 3.";
RL Nature 440:1194-1198(2006).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Spleen;
RX PubMed=15489334; DOI=10.1101/gr.2596504;
RG The MGC Project Team;
RT "The status, quality, and expansion of the NIH full-length cDNA project:
RT the Mammalian Gene Collection (MGC).";
RL Genome Res. 14:2121-2127(2004).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 65-272.
RC TISSUE=Embryo;
RX PubMed=14702039; DOI=10.1038/ng1285;
RA Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R.,
RA Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H.,
RA Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S.,
RA Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K.,
RA Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H.,
RA Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M.,
RA Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K.,
RA Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T.,
RA Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M.,
RA Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S.,
RA Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H.,
RA Tanase T.-O., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K.,
RA Arita M., Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N.,
RA Aotsuka S., Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S.,
RA Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O.,
RA Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H.,
RA Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B.,
RA Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y.,
RA Komiyama M., Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K.,
RA Fujii Y., Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T.,
RA Kobatake N., Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T.,
RA Noguchi S., Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y.,
RA Mizuno T., Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H.,
RA Watanabe M., Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y.,
RA Takahashi Y., Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H.,
RA Masuho Y., Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O.,
RA Isogai T., Sugano S.;
RT "Complete sequencing and characterization of 21,243 full-length human
RT cDNAs.";
RL Nat. Genet. 36:40-45(2004).
RN [5]
RP SIMILARITY WITH BORNAVIRUS NUCLEOCAPSID.
RX PubMed=20054395; DOI=10.1038/nature08695;
RA Horie M., Honda T., Suzuki Y., Kobayashi Y., Daito T., Oshida T., Ikuta K.,
RA Jern P., Gojobori T., Coffin J.M., Tomonaga K.;
RT "Endogenous non-retroviral RNA virus elements in mammalian genomes.";
RL Nature 463:84-87(2010).
CC -!- FUNCTION: May act as an RNA-binding protein. The C-terminal region is
CC highly homologous to the bornavirus nucleocapsid N protein that binds
CC viral RNA and oligomerizes. The viral protein also possesses a nuclear
CC import and a nuclear export signal. These 2 signals seem absent in
CC EBLN-2 supporting an unrelated function in Human.
CC -!- MISCELLANEOUS: Bornavirus is a non-retroviral RNA virus that does not
CC generate DNA forms during viral replication. Therefore, integration of
CC EBLN-2 must have occur through a mechanism relying on an endogenous
CC reverse transcriptase activity.
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DR EMBL; AY036895; AAK83528.1; -; mRNA.
DR EMBL; AC103559; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; BC051316; AAH51316.1; -; mRNA.
DR EMBL; BC064501; AAH64501.1; -; mRNA.
DR EMBL; AK001075; BAA91494.1; -; mRNA.
DR CCDS; CCDS54608.1; -.
DR RefSeq; NP_060499.3; NM_018029.4.
DR AlphaFoldDB; Q6P2I7; -.
DR SMR; Q6P2I7; -.
DR BioGRID; 120408; 10.
DR STRING; 9606.ENSP00000432104; -.
DR iPTMnet; Q6P2I7; -.
DR PhosphoSitePlus; Q6P2I7; -.
DR BioMuta; EBLN2; -.
DR DMDM; 74737218; -.
DR PaxDb; Q6P2I7; -.
DR PeptideAtlas; Q6P2I7; -.
DR PRIDE; Q6P2I7; -.
DR Antibodypedia; 76899; 69 antibodies from 6 providers.
DR DNASU; 55096; -.
DR Ensembl; ENST00000533473.1; ENSP00000432104.1; ENSG00000255423.1.
DR GeneID; 55096; -.
DR KEGG; hsa:55096; -.
DR MANE-Select; ENST00000533473.1; ENSP00000432104.1; NM_018029.4; NP_060499.3.
DR UCSC; uc003dpj.4; human.
DR CTD; 55096; -.
DR GeneCards; EBLN2; -.
DR HGNC; HGNC:25493; EBLN2.
DR HPA; ENSG00000255423; Tissue enhanced (bone).
DR MIM; 613250; gene.
DR neXtProt; NX_Q6P2I7; -.
DR OpenTargets; ENSG00000255423; -.
DR VEuPathDB; HostDB:ENSG00000255423; -.
DR eggNOG; ENOG502TDPR; Eukaryota.
DR GeneTree; ENSGT00490000044176; -.
DR HOGENOM; CLU_089340_0_0_1; -.
DR OMA; KSHFHPV; -.
DR OrthoDB; 684241at2759; -.
DR PhylomeDB; Q6P2I7; -.
DR PathwayCommons; Q6P2I7; -.
DR BioGRID-ORCS; 55096; 7 hits in 1065 CRISPR screens.
DR GenomeRNAi; 55096; -.
DR Pharos; Q6P2I7; Tdark.
DR PRO; PR:Q6P2I7; -.
DR Proteomes; UP000005640; Chromosome 3.
DR RNAct; Q6P2I7; protein.
DR Bgee; ENSG00000255423; Expressed in buccal mucosa cell and 183 other tissues.
DR Genevisible; Q6P2I7; HS.
DR Gene3D; 1.10.3040.10; -; 1.
DR InterPro; IPR009441; P40_nucleoprot_BD-vir.
DR InterPro; IPR036260; P40_nucleoprot_sf_BD-vir.
DR InterPro; IPR015969; P40_nucleoprot_sub1_BD-vir.
DR Pfam; PF06407; BDV_P40; 1.
DR SUPFAM; SSF101399; SSF101399; 1.
PE 2: Evidence at transcript level;
KW Reference proteome.
FT CHAIN 1..272
FT /note="Endogenous Bornavirus-like nucleoprotein 2"
FT /id="PRO_0000358716"
FT REGION 48..70
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT CONFLICT 176
FT /note="A -> G (in Ref. 1; AAK83528)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 272 AA; 30450 MW; 7937378569396D7D CRC64;
MGYFLKLYAY VNSHSLFVWV CDRSYKRSFR PMILNKIKEL SRNQFSTMSH LRKDSQPSSP
GDDAMDRSGL PDLQGRFELS GKNRQYPLDA LEPQPSIGDI KDIKKAAKSM LDPAHKSHFH
PVTPSLVFLC FIFDGLHQAL LSVGVSKRSN TVVGNENEER GTPYASRFKD MPNFIALEKS
SVLRHCCDLL IGIAAGSSDK ICTSSLQVQR RFKAMMASIG RLSHGESADL LISCNAESAI
GWISSRPWVG ELMFTLLFGD FESPLHKLRK SS