ECDK_ASPRU
ID ECDK_ASPRU Reviewed; 332 AA.
AC K0E3U5;
DT 25-APR-2018, integrated into UniProtKB/Swiss-Prot.
DT 28-NOV-2012, sequence version 1.
DT 03-AUG-2022, entry version 25.
DE RecName: Full=2-oxoglutarate-dependent dioxygenase ecdK {ECO:0000303|PubMed:22998630};
DE EC=1.14.-.- {ECO:0000305|PubMed:22998630};
DE AltName: Full=Echinocandin B biosynthetic cluster protein K {ECO:0000303|PubMed:22998630};
GN Name=ecdK {ECO:0000303|PubMed:22998630};
OS Aspergillus rugulosus (Emericella rugulosa).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes;
OC Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus.
OX NCBI_TaxID=41736;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA], FUNCTION, PATHWAY, AND BIOTECHNOLOGY.
RC STRAIN=ATCC 58397 / NRRL 11440;
RX PubMed=22998630; DOI=10.1021/ja307220z;
RA Cacho R.A., Jiang W., Chooi Y.H., Walsh C.T., Tang Y.;
RT "Identification and characterization of the echinocandin B biosynthetic
RT gene cluster from Emericella rugulosa NRRL 11440.";
RL J. Am. Chem. Soc. 134:16781-16790(2012).
CC -!- FUNCTION: 2-oxoglutarate-dependent dioxygenase; part of the gene
CC cluster that mediates the biosynthesis of echinocandin B, a fungal
CC lipidated cyclic hexapeptide that acts as an antifungal agent
CC (PubMed:22998630). Linoleoyl-AMP, produced by the fatty-acyl-AMP ligase
CC ecdI, is transferred to the initiation carrier domain (T0) of ecdA
CC (PubMed:22998630). The linoleoyl-S-phosphopantetheinyl-T0 is
CC sequentially extended with L-ornithine, L-threonine, L-proline, L-
CC homotyrosine, L-threonine, and 4R-methyl-L-proline to form the linear
CC hexapeptide (PubMed:22998630). Thereafter, the terminal condensation
CC (C7) performs macrocyclization of the NRPS product and the cyclic
CC scaffold is released from ecdA (PubMed:22998630). All six of the amino
CC acid residues are hydroxylated, including 4R,5R-dihydroxy-L-ornithine,
CC 4R-hydroxyl-L-proline, 3S,4S-dihydroxy-L-homotyrosine, and 3S-hydroxyl-
CC 4S-methyl-L-prolin (PubMed:22998630). In the pathway, all the
CC hydroxylation reactions are proposed to occur following completion of
CC the cyclic peptide, so the unhydroxylated precursor produced by ecdA
CC will undergo six rounds of hydroxylation (PubMed:22998630). Five
CC hydroxylase genes (ecdG, ecdH, ecdK, htyE and htyF) are embedded within
CC the echinocandin B (ecd) and L-homotyrosine (hty) clusters
CC (PubMed:22998630). {ECO:0000269|PubMed:22998630}.
CC -!- COFACTOR:
CC Name=Fe(2+); Xref=ChEBI:CHEBI:29033;
CC Evidence={ECO:0000255|PROSITE-ProRule:PRU00805};
CC Note=Binds 1 Fe(2+) ion per subunit. {ECO:0000255|PROSITE-
CC ProRule:PRU00805};
CC -!- PATHWAY: Antifungal biosynthesis. {ECO:0000305|PubMed:22998630}.
CC -!- BIOTECHNOLOGY: Due to their effectiveness as antifungal agents,
CC echinocandin derivatives can be used for the treatment of human
CC invasive candidiasis (PubMed:22998630). {ECO:0000269|PubMed:22998630}.
CC -!- SIMILARITY: Belongs to the iron/ascorbate-dependent oxidoreductase
CC family. {ECO:0000305}.
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DR EMBL; JX421684; AFT91382.1; -; Genomic_DNA.
DR AlphaFoldDB; K0E3U5; -.
DR SMR; K0E3U5; -.
DR BioCyc; MetaCyc:MON-19240; -.
DR GO; GO:0051213; F:dioxygenase activity; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR Gene3D; 2.60.120.330; -; 1.
DR InterPro; IPR026992; DIOX_N.
DR InterPro; IPR044861; IPNS-like_FE2OG_OXY.
DR InterPro; IPR027443; IPNS-like_sf.
DR InterPro; IPR005123; Oxoglu/Fe-dep_dioxygenase.
DR Pfam; PF03171; 2OG-FeII_Oxy; 1.
DR Pfam; PF14226; DIOX_N; 1.
DR PROSITE; PS51471; FE2OG_OXY; 1.
PE 1: Evidence at protein level;
KW Dioxygenase; Iron; Metal-binding; Oxidoreductase.
FT CHAIN 1..332
FT /note="2-oxoglutarate-dependent dioxygenase ecdK"
FT /id="PRO_0000443843"
FT DOMAIN 178..294
FT /note="Fe2OG dioxygenase"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00805"
FT BINDING 206
FT /ligand="Fe cation"
FT /ligand_id="ChEBI:CHEBI:24875"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00805"
FT BINDING 208
FT /ligand="Fe cation"
FT /ligand_id="ChEBI:CHEBI:24875"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00805"
FT BINDING 266
FT /ligand="Fe cation"
FT /ligand_id="ChEBI:CHEBI:24875"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00805"
FT BINDING 285
FT /ligand="2-oxoglutarate"
FT /ligand_id="ChEBI:CHEBI:16810"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00805"
SQ SEQUENCE 332 AA; 37517 MW; 5EE5696FA5CB8AC9 CRC64;
MSVLTLDFTK FHSGSEVERR AFGQALLDGF TTTGFVKLIN HGFSKEEMAD IFNWNQRFFD
LPIDRKAAIR NDEGPKPQRG WSSLGAEKTG FLNPGGKLSL ARASNNDRQD AKEHFDIGPA
EDEEFQNKWP EEQTLPGFQE TMNSYFDRSQ AITLELLEAL ALAMDVPKDT FVGLCHGHAS
ELRLNHYPSI PVKTIEEGKT NRIWPHTDFG IITLLAQDDI GGLEIQDRNH PSDFLPVNRE
DSTEFVVNIG DILERWTNGR LRAGLHQVTT PRSMQQKGNG TLPTRRSVAF FLKPHRQMSV
ASISHFVPGN QSPRYEDMTA LAYQQLRTGI VY