ECP63_ARATH
ID ECP63_ARATH Reviewed; 448 AA.
AC Q9SKP0; Q8GX85; Q96246;
DT 15-FEB-2017, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-2000, sequence version 1.
DT 03-AUG-2022, entry version 121.
DE RecName: Full=Late embryogenesis abundant protein ECP63 {ECO:0000305};
DE AltName: Full=Embryonic cell protein 63 {ECO:0000305};
DE Short=AtECP63 {ECO:0000303|PubMed:9016956};
DE AltName: Full=LEA domain-containing protein ECP63 {ECO:0000305};
GN Name=ECP63 {ECO:0000303|PubMed:9016956};
GN OrderedLocusNames=At2g36640 {ECO:0000312|Araport:AT2G36640};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], TISSUE SPECIFICITY, AND INDUCTION BY ABSCISIC
RP ACID.
RC STRAIN=cv. Columbia; TISSUE=Dry seed;
RX PubMed=9016956; DOI=10.1016/s0378-1119(96)00727-5;
RA Yang H., Saitou T., Komeda Y., Harada H., Kamada H.;
RT "Arabidopsis thaliana ECP63 encoding a LEA protein is located in chromosome
RT 4.";
RL Gene 184:83-88(1997).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617197; DOI=10.1038/45471;
RA Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D.,
RA Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V.,
RA Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S.,
RA Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J.,
RA Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M.,
RA Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O.,
RA Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.;
RT "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.";
RL Nature 402:761-768(1999).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 300-448.
RC STRAIN=cv. Columbia;
RX PubMed=11910074; DOI=10.1126/science.1071006;
RA Seki M., Narusaka M., Kamiya A., Ishida J., Satou M., Sakurai T.,
RA Nakajima M., Enju A., Akiyama K., Oono Y., Muramatsu M., Hayashizaki Y.,
RA Kawai J., Carninci P., Itoh M., Ishii Y., Arakawa T., Shibata K.,
RA Shinagawa A., Shinozaki K.;
RT "Functional annotation of a full-length Arabidopsis cDNA collection.";
RL Science 296:141-145(2002).
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 300-448.
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [6]
RP FUNCTION, AND DEVELOPMENTAL STAGE.
RX PubMed=26973252; DOI=10.1016/j.jplph.2016.02.012;
RA Nowak K., Gaj M.D.;
RT "Stress-related function of bHLH109 in somatic embryo induction in
RT Arabidopsis.";
RL J. Plant Physiol. 193:119-126(2016).
CC -!- FUNCTION: May be involved in the BHLH109-mediated regulation of somatic
CC embryogenesis. {ECO:0000269|PubMed:26973252}.
CC -!- TISSUE SPECIFICITY: Expressed in mature seeds.
CC {ECO:0000269|PubMed:9016956}.
CC -!- DEVELOPMENTAL STAGE: Expressed during somatic embryogenesis.
CC {ECO:0000269|PubMed:26973252}.
CC -!- INDUCTION: By abscisic acid (ABA) in immature siliques.
CC {ECO:0000269|PubMed:9016956}.
CC -!- SIMILARITY: Belongs to the LEA type 4 family. {ECO:0000305}.
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DR EMBL; D64140; BAA11017.1; -; mRNA.
DR EMBL; AC006282; AAD20140.1; -; Genomic_DNA.
DR EMBL; CP002685; AEC09277.1; -; Genomic_DNA.
DR EMBL; AK118375; BAC42987.1; -; mRNA.
DR EMBL; BT003672; AAO39900.1; -; mRNA.
DR PIR; H84782; H84782.
DR PIR; JC6171; JC6171.
DR RefSeq; NP_181202.1; NM_129219.3.
DR AlphaFoldDB; Q9SKP0; -.
DR SMR; Q9SKP0; -.
DR STRING; 3702.AT2G36640.1; -.
DR PaxDb; Q9SKP0; -.
DR PRIDE; Q9SKP0; -.
DR ProteomicsDB; 247057; -.
DR EnsemblPlants; AT2G36640.1; AT2G36640.1; AT2G36640.
DR GeneID; 818236; -.
DR Gramene; AT2G36640.1; AT2G36640.1; AT2G36640.
DR KEGG; ath:AT2G36640; -.
DR Araport; AT2G36640; -.
DR TAIR; locus:2040615; AT2G36640.
DR eggNOG; ENOG502R2QW; Eukaryota.
DR HOGENOM; CLU_058121_0_0_1; -.
DR InParanoid; Q9SKP0; -.
DR OMA; ANEAYNM; -.
DR OrthoDB; 1231363at2759; -.
DR PhylomeDB; Q9SKP0; -.
DR PRO; PR:Q9SKP0; -.
DR Proteomes; UP000006548; Chromosome 2.
DR ExpressionAtlas; Q9SKP0; baseline and differential.
DR GO; GO:0005829; C:cytosol; HDA:TAIR.
DR InterPro; IPR004238; LEA_4.
DR Pfam; PF02987; LEA_4; 5.
PE 2: Evidence at transcript level;
KW Coiled coil; Reference proteome.
FT CHAIN 1..448
FT /note="Late embryogenesis abundant protein ECP63"
FT /id="PRO_0000438826"
FT REGION 282..360
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 411..448
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 297..331
FT /evidence="ECO:0000255"
FT COMPBIAS 284..356
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 418..432
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT CONFLICT 187
FT /note="A -> S (in Ref. 1; BAA11017)"
FT /evidence="ECO:0000305"
FT CONFLICT 354
FT /note="A -> P (in Ref. 1; BAA11017)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 448 AA; 48493 MW; C72563D4194DD9BF CRC64;
MASDKQKAER AEVAARLAAE DLHDINKSGG ADVTMYKVTE RTTEHPPEQD RPGVIGSVFR
AVQGTYEHAR DAVVGKTHEA AESTKEGAQI ASEKAVGAKD ATVEKAKETA DYTAEKVGEY
KDYTVDKAKE AKDTTAEKAK ETANYTADKA VEAKDKTAEK IGEYKDYAVD KAVEAKDKTA
EKAKETANYT ADKAKEAKDK TAEKVGEYKD YTVDKAVEAR DYTAEKAIEA KDKTAEKTGE
YKDYTVEKAT EGKDVTVSKL GELKDSAVET AKRAMGFLSG KTEEAKGKAV ETKDTAKENM
EKAGEVTRQK MEEMRLEGKE LKEEAGAKAQ EASQKTREST ESGAQKAEET KDSAAVRGNE
AKGTIFGALG NVTEAIKSKL TMPSDIVEET RAAREHGGTG RTVVEVKVED SKPGKVATSL
KASDQMTGQT FNDVGRMDDD ARKDKGKL
