ECTD_NOCFA
ID ECTD_NOCFA Reviewed; 298 AA.
AC Q5YW75;
DT 01-FEB-2005, integrated into UniProtKB/Swiss-Prot.
DT 23-NOV-2004, sequence version 1.
DT 03-AUG-2022, entry version 82.
DE RecName: Full=Ectoine dioxygenase {ECO:0000250|UniProtKB:Q2TDY4};
DE EC=1.14.11.55 {ECO:0000250|UniProtKB:Q2TDY4};
DE AltName: Full=Ectoine hydroxylase {ECO:0000250|UniProtKB:Q2TDY4};
GN Name=ectD {ECO:0000250|UniProtKB:Q2TDY4}; OrderedLocusNames=NFA_27190;
OS Nocardia farcinica (strain IFM 10152).
OC Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.
OX NCBI_TaxID=247156;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=IFM 10152;
RX PubMed=15466710; DOI=10.1073/pnas.0406410101;
RA Ishikawa J., Yamashita A., Mikami Y., Hoshino Y., Kurita H., Hotta K.,
RA Shiba T., Hattori M.;
RT "The complete genomic sequence of Nocardia farcinica IFM 10152.";
RL Proc. Natl. Acad. Sci. U.S.A. 101:14925-14930(2004).
CC -!- FUNCTION: Involved in the biosynthesis of 5-hydroxyectoine, called
CC compatible solute, which helps organisms to survive extreme osmotic
CC stress by acting as a highly soluble organic osmolyte. Catalyzes the 2-
CC oxoglutarate-dependent selective hydroxylation of L-ectoine to yield
CC (4S,5S)-5-hydroxyectoine. {ECO:0000250|UniProtKB:Q2TDY4}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=2-oxoglutarate + L-ectoine + O2 = 5-hydroxyectoine + CO2 +
CC succinate; Xref=Rhea:RHEA:45740, ChEBI:CHEBI:15379,
CC ChEBI:CHEBI:16526, ChEBI:CHEBI:16810, ChEBI:CHEBI:30031,
CC ChEBI:CHEBI:58515, ChEBI:CHEBI:85413; EC=1.14.11.55;
CC Evidence={ECO:0000250|UniProtKB:Q2TDY4};
CC -!- COFACTOR:
CC Name=Fe(2+); Xref=ChEBI:CHEBI:29033;
CC Evidence={ECO:0000250|UniProtKB:Q2TDY4};
CC Note=Binds 1 Fe(2+) ion. {ECO:0000250|UniProtKB:Q2TDY4};
CC -!- SUBUNIT: Homodimer. {ECO:0000250|UniProtKB:Q2TDY4}.
CC -!- SIMILARITY: Belongs to the PhyH family. EctD subfamily.
CC {ECO:0000250|UniProtKB:Q2TDY4}.
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DR EMBL; AP006618; BAD57566.1; -; Genomic_DNA.
DR AlphaFoldDB; Q5YW75; -.
DR SMR; Q5YW75; -.
DR STRING; 247156.NFA_27190; -.
DR EnsemblBacteria; BAD57566; BAD57566; NFA_27190.
DR KEGG; nfa:NFA_27190; -.
DR eggNOG; COG5285; Bacteria.
DR HOGENOM; CLU_048953_5_0_11; -.
DR OMA; FPRSNVF; -.
DR Proteomes; UP000006820; Chromosome.
DR GO; GO:0016706; F:2-oxoglutarate-dependent dioxygenase activity; ISS:UniProtKB.
DR GO; GO:0005506; F:iron ion binding; ISS:UniProtKB.
DR GO; GO:0042400; P:ectoine catabolic process; ISS:UniProtKB.
DR InterPro; IPR012774; EctD.
DR InterPro; IPR008775; Phytyl_CoA_dOase.
DR Pfam; PF05721; PhyH; 1.
DR TIGRFAMs; TIGR02408; ectoine_ThpD; 1.
PE 3: Inferred from homology;
KW Dioxygenase; Iron; Metal-binding; Oxidoreductase; Reference proteome.
FT CHAIN 1..298
FT /note="Ectoine dioxygenase"
FT /id="PRO_0000215240"
FT REGION 1..26
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 8..26
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT BINDING 133
FT /ligand="L-ectoine"
FT /ligand_id="ChEBI:CHEBI:58515"
FT /evidence="ECO:0000250|UniProtKB:Q1GNW5"
FT BINDING 150
FT /ligand="Fe cation"
FT /ligand_id="ChEBI:CHEBI:24875"
FT /evidence="ECO:0000250|UniProtKB:Q2TDY4"
FT BINDING 152
FT /ligand="Fe cation"
FT /ligand_id="ChEBI:CHEBI:24875"
FT /evidence="ECO:0000250|UniProtKB:Q2TDY4"
FT BINDING 251
FT /ligand="Fe cation"
FT /ligand_id="ChEBI:CHEBI:24875"
FT /evidence="ECO:0000250|UniProtKB:Q2TDY4"
FT SITE 156
FT /note="Important for ectoine stabilization"
FT /evidence="ECO:0000250|UniProtKB:Q1GNW5"
SQ SEQUENCE 298 AA; 33480 MW; C98765BD70E75DD9 CRC64;
MLQQAIDRDP VDRIDRYPTR TAEPAPHIER LDPTVWGEVH SEQLSTFDRD GFSIMENLLS
PEEVSEFRAE VERLAADKSL LDDERVIREK TSNRVRSVFE VHKLSAAVAD LVRQTRIVGL
ARQVLGSDVY LHQTRINYMP GFRGTGFYWH SDFETWHAED GMPAPRAVSL SIALTDNYPF
NGSLMVMPGS HRTFVPCVGA TPADHYRESL REQEIGVPST EDITVLAQRY GITQFTGRAG
SALLFDSNVM HGSANNITPF PRSNIFLVFN SVENTLVEPF AAPAPRPTYI GSRDFTPL