EDL1_ARATH
ID EDL1_ARATH Reviewed; 293 AA.
AC Q9LF38;
DT 10-AUG-2010, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 25-MAY-2022, entry version 93.
DE RecName: Full=EID1-like F-box protein 1;
GN Name=EDL1; OrderedLocusNames=At5g15440; ORFNames=T20K14.50;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130714; DOI=10.1038/35048507;
RA Tabata S., Kaneko T., Nakamura Y., Kotani H., Kato T., Asamizu E.,
RA Miyajima N., Sasamoto S., Kimura T., Hosouchi T., Kawashima K., Kohara M.,
RA Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Naruo K.,
RA Okumura S., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M.,
RA Yasuda M., Sato S., de la Bastide M., Huang E., Spiegel L., Gnoj L.,
RA O'Shaughnessy A., Preston R., Habermann K., Murray J., Johnson D.,
RA Rohlfing T., Nelson J., Stoneking T., Pepin K., Spieth J., Sekhon M.,
RA Armstrong J., Becker M., Belter E., Cordum H., Cordes M., Courtney L.,
RA Courtney W., Dante M., Du H., Edwards J., Fryman J., Haakensen B.,
RA Lamar E., Latreille P., Leonard S., Meyer R., Mulvaney E., Ozersky P.,
RA Riley A., Strowmatt C., Wagner-McPherson C., Wollam A., Yoakum M., Bell M.,
RA Dedhia N., Parnell L., Shah R., Rodriguez M., Hoon See L., Vil D.,
RA Baker J., Kirchoff K., Toth K., King L., Bahret A., Miller B., Marra M.A.,
RA Martienssen R., McCombie W.R., Wilson R.K., Murphy G., Bancroft I.,
RA Volckaert G., Wambutt R., Duesterhoeft A., Stiekema W., Pohl T.,
RA Entian K.-D., Terryn N., Hartley N., Bent E., Johnson S., Langham S.-A.,
RA McCullagh B., Robben J., Grymonprez B., Zimmermann W., Ramsperger U.,
RA Wedler H., Balke K., Wedler E., Peters S., van Staveren M., Dirkse W.,
RA Mooijman P., Klein Lankhorst R., Weitzenegger T., Bothe G., Rose M.,
RA Hauf J., Berneiser S., Hempel S., Feldpausch M., Lamberth S.,
RA Villarroel R., Gielen J., Ardiles W., Bents O., Lemcke K., Kolesov G.,
RA Mayer K.F.X., Rudd S., Schoof H., Schueller C., Zaccaria P., Mewes H.-W.,
RA Bevan M., Fransz P.F.;
RT "Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.";
RL Nature 408:823-826(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Kim C.J., Chen H., Cheuk R., Shinn P., Ecker J.R.;
RT "Arabidopsis ORF clones.";
RL Submitted (JUL-2004) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A.,
RA Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y.,
RA Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., Akiyama K.,
RA Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y.,
RA Shinozaki K.;
RT "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs.";
RL Submitted (JUL-2006) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; AL391143; CAC01743.1; -; Genomic_DNA.
DR EMBL; CP002688; AED92161.1; -; Genomic_DNA.
DR EMBL; BT014972; AAT70423.1; -; mRNA.
DR EMBL; AK226950; BAE99020.1; -; mRNA.
DR PIR; T51522; T51522.
DR RefSeq; NP_197048.1; NM_121548.3.
DR AlphaFoldDB; Q9LF38; -.
DR STRING; 3702.AT5G15440.1; -.
DR iPTMnet; Q9LF38; -.
DR PaxDb; Q9LF38; -.
DR PRIDE; Q9LF38; -.
DR ProteomicsDB; 222064; -.
DR EnsemblPlants; AT5G15440.1; AT5G15440.1; AT5G15440.
DR GeneID; 831397; -.
DR Gramene; AT5G15440.1; AT5G15440.1; AT5G15440.
DR KEGG; ath:AT5G15440; -.
DR Araport; AT5G15440; -.
DR TAIR; locus:2180907; AT5G15440.
DR eggNOG; ENOG502QQXG; Eukaryota.
DR HOGENOM; CLU_065460_0_0_1; -.
DR InParanoid; Q9LF38; -.
DR OMA; CTKGHLN; -.
DR OrthoDB; 1073004at2759; -.
DR PhylomeDB; Q9LF38; -.
DR PRO; PR:Q9LF38; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9LF38; baseline and differential.
DR Genevisible; Q9LF38; AT.
DR InterPro; IPR040267; EID1-like.
DR InterPro; IPR036047; F-box-like_dom_sf.
DR PANTHER; PTHR31348; PTHR31348; 1.
DR SUPFAM; SSF81383; SSF81383; 1.
PE 2: Evidence at transcript level;
KW Reference proteome.
FT CHAIN 1..293
FT /note="EID1-like F-box protein 1"
FT /id="PRO_0000396017"
FT DOMAIN 16..68
FT /note="F-box"
FT REGION 245..293
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 246..266
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 293 AA; 33095 MW; F05B908A806CC805 CRC64;
MILPKQYCCT HSPSCQCTKG HLNEDVLLLV FQHLNWNPKL VATLSCVCRW FDDFAKRVLW
KEFCKTRAPK MMLDLQSSGS HCIDGNWRAL GKLLIYCSGC TQGGLFNSSV QIPGHFVYRT
RFSRTLGRSL LPPQCRTDVL YVCDPCEHLD QGEEGDVGLF RGIFKSFPTS KVRKVIINKA
VPFHPSEVCP YCKAKLWSML QAKIIPQSAC IRLEAYEDCI EYFVCLNGHL LGICTLAPLS
DSEDAIPSED NNHTEKKQDN GFPRENVLKR RNSLLGGSEN GPPPQKRLTN PNQ