EDL3_ARATH
ID EDL3_ARATH Reviewed; 272 AA.
AC Q93ZT5; Q9LYB6;
DT 10-AUG-2010, integrated into UniProtKB/Swiss-Prot.
DT 01-DEC-2001, sequence version 1.
DT 25-MAY-2022, entry version 95.
DE RecName: Full=EID1-like F-box protein 3;
GN Name=EDL3; OrderedLocusNames=At3g63060; ORFNames=T20O10.160;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130713; DOI=10.1038/35048706;
RA Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B.,
RA Valle G., Bloecker H., Perez-Alonso M., Obermaier B., Delseny M.,
RA Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V.,
RA Choisne N., Artiguenave F., Robert C., Brottier P., Wincker P.,
RA Cattolico L., Weissenbach J., Saurin W., Quetier F., Schaefer M.,
RA Mueller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H.,
RA Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H., Voss H.,
RA Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A.,
RA Toppo S., Simionati B., Conrad A., Hornischer K., Kauer G., Loehnert T.-H.,
RA Nordsiek G., Reichelt J., Scharfe M., Schoen O., Bargues M., Terol J.,
RA Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwaelder B.,
RA Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D.,
RA de Haan M., Maarse A.C., Alcaraz J.-P., Cottet A., Casacuberta E.,
RA Monfort A., Argiriou A., Flores M., Liguori R., Vitale D., Mannhaupt G.,
RA Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.-W., Mayer K.F.X.,
RA Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M.,
RA Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B.,
RA Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J.,
RA Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C.,
RA Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y.,
RA Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K.,
RA Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A.,
RA Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T.,
RA Watanabe A., Yamada M., Yasuda M., Tabata S.;
RT "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.";
RL Nature 408:820-822(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Shinn P., Chen H., Cheuk R.F., Kim C.J., Ecker J.R.;
RT "Arabidopsis ORF clones.";
RL Submitted (DEC-2004) to the EMBL/GenBank/DDBJ databases.
CC -!- SEQUENCE CAUTION:
CC Sequence=CAB87751.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AL163816; CAB87751.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002686; AEE80430.1; -; Genomic_DNA.
DR EMBL; AY056271; AAL07120.1; -; mRNA.
DR EMBL; BT020425; AAW28552.1; -; mRNA.
DR PIR; T48095; T48095.
DR RefSeq; NP_567137.1; NM_116171.3.
DR AlphaFoldDB; Q93ZT5; -.
DR BioGRID; 10795; 8.
DR IntAct; Q93ZT5; 1.
DR STRING; 3702.AT3G63060.1; -.
DR PaxDb; Q93ZT5; -.
DR PRIDE; Q93ZT5; -.
DR EnsemblPlants; AT3G63060.1; AT3G63060.1; AT3G63060.
DR GeneID; 825481; -.
DR Gramene; AT3G63060.1; AT3G63060.1; AT3G63060.
DR KEGG; ath:AT3G63060; -.
DR Araport; AT3G63060; -.
DR TAIR; locus:2099227; AT3G63060.
DR eggNOG; KOG1571; Eukaryota.
DR HOGENOM; CLU_065460_1_0_1; -.
DR InParanoid; Q93ZT5; -.
DR OMA; CVNGHLY; -.
DR OrthoDB; 1073004at2759; -.
DR PhylomeDB; Q93ZT5; -.
DR PRO; PR:Q93ZT5; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; Q93ZT5; baseline and differential.
DR Genevisible; Q93ZT5; AT.
DR GO; GO:0005634; C:nucleus; IDA:TAIR.
DR GO; GO:0009738; P:abscisic acid-activated signaling pathway; IMP:TAIR.
DR GO; GO:0010029; P:regulation of seed germination; IMP:TAIR.
DR GO; GO:0009737; P:response to abscisic acid; IMP:TAIR.
DR GO; GO:0006970; P:response to osmotic stress; IMP:TAIR.
DR GO; GO:0009651; P:response to salt stress; IMP:TAIR.
DR GO; GO:0009414; P:response to water deprivation; IMP:TAIR.
DR GO; GO:0010228; P:vegetative to reproductive phase transition of meristem; IMP:TAIR.
DR InterPro; IPR040267; EID1-like.
DR PANTHER; PTHR31348; PTHR31348; 1.
PE 2: Evidence at transcript level;
KW Reference proteome.
FT CHAIN 1..272
FT /note="EID1-like F-box protein 3"
FT /id="PRO_0000396019"
FT DOMAIN 29..81
FT /note="F-box"
SQ SEQUENCE 272 AA; 30560 MW; 7FC20D6087E31D1F CRC64;
MLLEGRFSVV QMNTNRRLKF NQPSRLPNSG KSGIENERVL VLVFESISWD IHTLCTIASL
SRRFCAIARR ILWRRLCVNR APGMVAALSG EDPSGRIDGG WHALAKLMFF CGGGESTRYF
NLSQPTSGHF ACESRFSKTS GRFFLPKNCR RDLLYMSDPC EHQAVGGDEH LGVFRGVFRE
FMRSKTRECL VRRQAALEEK VRCPYCGGRV WSMTAARLVP KSAARRLGSR EGGLEFFVCV
NGHLHGTCWL IPLSSEEEDN GEDDDNSDGS VI
