EED_CHICK
ID EED_CHICK Reviewed; 446 AA.
AC Q5ZKH3;
DT 22-JUL-2008, integrated into UniProtKB/Swiss-Prot.
DT 23-NOV-2004, sequence version 1.
DT 03-AUG-2022, entry version 117.
DE RecName: Full=Polycomb protein EED;
GN Name=EED; ORFNames=RCJMB04_10n8;
OS Gallus gallus (Chicken).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae;
OC Phasianinae; Gallus.
OX NCBI_TaxID=9031;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=CB; TISSUE=Bursa of Fabricius;
RX PubMed=15642098; DOI=10.1186/gb-2004-6-1-r6;
RA Caldwell R.B., Kierzek A.M., Arakawa H., Bezzubov Y., Zaim J., Fiedler P.,
RA Kutter S., Blagodatski A., Kostovska D., Koter M., Plachy J., Carninci P.,
RA Hayashizaki Y., Buerstedde J.-M.;
RT "Full-length cDNAs from chicken bursal lymphocytes to facilitate gene
RT function analysis.";
RL Genome Biol. 6:R6.1-R6.9(2005).
CC -!- FUNCTION: Polycomb group (PcG) protein. Component of the PRC2/EED-EZH2
CC complex, which methylates 'Lys-9' and 'Lys-27' of histone H3, leading
CC to transcriptional repression of the affected target gene (By
CC similarity). {ECO:0000250}.
CC -!- SUBUNIT: Component of the PRC2/EED-EZH2 complex. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the WD repeat ESC family. {ECO:0000305}.
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DR EMBL; AJ720111; CAG31770.1; -; mRNA.
DR RefSeq; NP_001026547.1; NM_001031376.1.
DR AlphaFoldDB; Q5ZKH3; -.
DR SMR; Q5ZKH3; -.
DR STRING; 9031.ENSGALP00000022724; -.
DR PaxDb; Q5ZKH3; -.
DR Ensembl; ENSGALT00000054939; ENSGALP00000057840; ENSGALG00000014060.
DR GeneID; 426381; -.
DR KEGG; gga:426381; -.
DR CTD; 8726; -.
DR VEuPathDB; HostDB:geneid_426381; -.
DR eggNOG; KOG1034; Eukaryota.
DR GeneTree; ENSGT00510000047334; -.
DR HOGENOM; CLU_032683_1_0_1; -.
DR InParanoid; Q5ZKH3; -.
DR OMA; WSYDSVT; -.
DR OrthoDB; 1191277at2759; -.
DR PhylomeDB; Q5ZKH3; -.
DR Reactome; R-GGA-212300; PRC2 methylates histones and DNA.
DR Reactome; R-GGA-2559580; Oxidative Stress Induced Senescence.
DR Reactome; R-GGA-8943724; Regulation of PTEN gene transcription.
DR Reactome; R-GGA-8953750; Transcriptional Regulation by E2F6.
DR PRO; PR:Q5ZKH3; -.
DR Proteomes; UP000000539; Chromosome 1.
DR Bgee; ENSGALG00000014060; Expressed in spleen and 12 other tissues.
DR GO; GO:0035098; C:ESC/E(Z) complex; ISS:UniProtKB.
DR GO; GO:0006325; P:chromatin organization; IEA:UniProtKB-KW.
DR GO; GO:0016571; P:histone methylation; IEA:InterPro.
DR GO; GO:0000122; P:negative regulation of transcription by RNA polymerase II; IBA:GO_Central.
DR Gene3D; 2.130.10.10; -; 1.
DR InterPro; IPR037352; Polycomb_EED.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR001680; WD40_repeat.
DR InterPro; IPR019775; WD40_repeat_CS.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR PANTHER; PTHR10253:SF5; PTHR10253:SF5; 1.
DR Pfam; PF00400; WD40; 2.
DR SMART; SM00320; WD40; 6.
DR SUPFAM; SSF50978; SSF50978; 1.
DR PROSITE; PS00678; WD_REPEATS_1; 1.
DR PROSITE; PS50082; WD_REPEATS_2; 2.
DR PROSITE; PS50294; WD_REPEATS_REGION; 1.
PE 2: Evidence at transcript level;
KW Chromatin regulator; Nucleus; Reference proteome; Repeat; Repressor;
KW Transcription; Transcription regulation; WD repeat.
FT CHAIN 1..446
FT /note="Polycomb protein EED"
FT /id="PRO_0000343727"
FT REPEAT 96..139
FT /note="WD 1"
FT REPEAT 147..190
FT /note="WD 2"
FT REPEAT 193..233
FT /note="WD 3"
FT REPEAT 239..280
FT /note="WD 4"
FT REPEAT 309..346
FT /note="WD 5"
FT REPEAT 364..404
FT /note="WD 6"
FT REPEAT 413..446
FT /note="WD 7"
FT REGION 1..77
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 46..69
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 446 AA; 50378 MW; 7AB0D05AC900B8B6 CRC64;
MSERGEAPAA AASAGAGGEM PAKKQKLSSD ENSNPGDLSG DENDDAVSIE SGTNTERPDT
PTNTPNAPGR KSWGKGKWKS KKCKYSFKCV NSLKEDHGQP LFGVQFNWHS KEGDPLVFAT
VGSNRVTLYE CHSQGEIRLL QSYVDADADE NFYTCAWTYD SNTSHPLLAV AGSRGIIRII
NPITMQCIKH YVGHGNAINE LKFHPRDPNL LLSVSKDHAL RLWNIQTDTL VAIFGGVEGH
RDEVLSADYD LLGEKIMSCG MDHSLKLWRI NSKRMINAIK ESYEYNPNKT NRPFISQKIH
FPDFSTRDIH RNYVDCVRWL GDLILSKSCE NAIVCWKPGK MEDDIDKIKP SESNVTILGR
FDYSQCDIWY MRFSMDFWQK MLALGNQVGK LYVWDLEIED PHKAKCTTLT HPKCVAAIRQ
TSFSRDSSIL IAVCDDASIW RWDRLR