EF117_ARATH
ID EF117_ARATH Reviewed; 329 AA.
AC Q9M9B2;
DT 12-JUN-2007, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 03-AUG-2022, entry version 123.
DE RecName: Full=Ethylene-responsive transcription factor ERF117;
GN Name=ERF117; OrderedLocusNames=At1g49120; ORFNames=F27J15.11;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RA Pan Y., Gong W., Liu D., Fu Q., Mei W.-Q., Song W.-Q., Ma L.-G., Luo J.-C.,
RA Deng X.-W., Zhu Y.-X.;
RT "Molecular cloning, expression, phylogenetic and functional
RT characterization of the Arabidopsis AP2/EREBP transcription factor
RT family.";
RL Submitted (FEB-2004) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [4]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=16407444; DOI=10.1104/pp.105.073783;
RA Nakano T., Suzuki K., Fujimura T., Shinshi H.;
RT "Genome-wide analysis of the ERF gene family in Arabidopsis and rice.";
RL Plant Physiol. 140:411-432(2006).
CC -!- FUNCTION: Probably acts as a transcriptional activator. Binds to the
CC GCC-box pathogenesis-related promoter element. May be involved in the
CC regulation of gene expression by stress factors and by components of
CC stress signal transduction pathways (By similarity). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the AP2/ERF transcription factor family. ERF
CC subfamily. {ECO:0000305}.
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DR EMBL; AY560840; AAT44907.1; -; mRNA.
DR EMBL; AC016041; AAF69719.1; -; Genomic_DNA.
DR EMBL; CP002684; AEE32392.1; -; Genomic_DNA.
DR RefSeq; NP_175338.1; NM_103802.1.
DR AlphaFoldDB; Q9M9B2; -.
DR SMR; Q9M9B2; -.
DR BioGRID; 26560; 4.
DR IntAct; Q9M9B2; 4.
DR STRING; 3702.AT1G49120.1; -.
DR iPTMnet; Q9M9B2; -.
DR PaxDb; Q9M9B2; -.
DR PRIDE; Q9M9B2; -.
DR EnsemblPlants; AT1G49120.1; AT1G49120.1; AT1G49120.
DR GeneID; 841335; -.
DR Gramene; AT1G49120.1; AT1G49120.1; AT1G49120.
DR KEGG; ath:AT1G49120; -.
DR Araport; AT1G49120; -.
DR TAIR; locus:2028426; AT1G49120.
DR eggNOG; ENOG502S2BD; Eukaryota.
DR HOGENOM; CLU_062946_0_0_1; -.
DR InParanoid; Q9M9B2; -.
DR OMA; MLEDPLM; -.
DR OrthoDB; 1270074at2759; -.
DR PhylomeDB; Q9M9B2; -.
DR PRO; PR:Q9M9B2; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q9M9B2; baseline and differential.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; ISS:TAIR.
DR GO; GO:0009873; P:ethylene-activated signaling pathway; IEA:UniProtKB-KW.
DR CDD; cd00018; AP2; 1.
DR Gene3D; 3.30.730.10; -; 1.
DR InterPro; IPR001471; AP2/ERF_dom.
DR InterPro; IPR036955; AP2/ERF_dom_sf.
DR InterPro; IPR016177; DNA-bd_dom_sf.
DR Pfam; PF00847; AP2; 1.
DR PRINTS; PR00367; ETHRSPELEMNT.
DR SMART; SM00380; AP2; 1.
DR SUPFAM; SSF54171; SSF54171; 1.
DR PROSITE; PS51032; AP2_ERF; 1.
PE 2: Evidence at transcript level;
KW Activator; DNA-binding; Ethylene signaling pathway; Nucleus;
KW Reference proteome; Transcription; Transcription regulation.
FT CHAIN 1..329
FT /note="Ethylene-responsive transcription factor ERF117"
FT /id="PRO_0000290428"
FT DNA_BIND 86..143
FT /note="AP2/ERF"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00366"
FT REGION 25..51
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 71..90
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 25..42
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 329 AA; 37478 MW; 1B6110D534D5C411 CRC64;
MISFREENID LNLIKTISVI CNDPDATDSS SDDESISGNN PRRQIKPKPP KRYVSKICVP
TLIKRYENVS NSTGNKAAGN RKTSSGFKGV RRRPWGKFAA EIRNPFEKKR KWLGTFPTEE
EAAEAYQKSK REFDERLGLV KQEKDLVDLT KPCGVRKPEE KEVTEKSNCK KVNKRIVTDQ
KPFGCGYNAD HEEEGVISKM LEDPLMTSSI ADIFGDSAVE ANDIWVDYNS VEFISIVDDF
KFDFVENDRV GKEKTFGFKI GDHTKVNQHA KIVSTNGDLF VDDLLDFDPL IDDFKLEDFP
MDDLGLLGDP EDDDFSWFNG TTDWIDKFL
