EFC12_HUMAN
ID EFC12_HUMAN Reviewed; 572 AA.
AC Q6NXP0; Q69YX4;
DT 30-MAY-2006, integrated into UniProtKB/Swiss-Prot.
DT 05-JUL-2004, sequence version 1.
DT 03-AUG-2022, entry version 140.
DE RecName: Full=EF-hand calcium-binding domain-containing protein 12;
GN Name=EFCAB12; Synonyms=C3orf25;
OS Homo sapiens (Human).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
OX NCBI_TaxID=9606;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Brain;
RX PubMed=15489334; DOI=10.1101/gr.2596504;
RG The MGC Project Team;
RT "The status, quality, and expansion of the NIH full-length cDNA project:
RT the Mammalian Gene Collection (MGC).";
RL Genome Res. 14:2121-2127(2004).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 91-572.
RC TISSUE=Testis;
RX PubMed=17974005; DOI=10.1186/1471-2164-8-399;
RA Bechtel S., Rosenfelder H., Duda A., Schmidt C.P., Ernst U.,
RA Wellenreuther R., Mehrle A., Schuster C., Bahr A., Bloecker H., Heubner D.,
RA Hoerlein A., Michel G., Wedler H., Koehrer K., Ottenwaelder B., Poustka A.,
RA Wiemann S., Schupp I.;
RT "The full-ORF clone resource of the German cDNA consortium.";
RL BMC Genomics 8:399-399(2007).
CC -!- INTERACTION:
CC Q6NXP0; Q13643: FHL3; NbExp=3; IntAct=EBI-10251535, EBI-741101;
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DR EMBL; BC066975; AAH66975.1; -; mRNA.
DR EMBL; AL133011; CAH10712.1; -; mRNA.
DR CCDS; CCDS54638.1; -.
DR RefSeq; NP_997190.1; NM_207307.2.
DR AlphaFoldDB; Q6NXP0; -.
DR BioGRID; 124687; 4.
DR IntAct; Q6NXP0; 2.
DR STRING; 9606.ENSP00000420854; -.
DR iPTMnet; Q6NXP0; -.
DR PhosphoSitePlus; Q6NXP0; -.
DR BioMuta; EFCAB12; -.
DR DMDM; 74736979; -.
DR PaxDb; Q6NXP0; -.
DR PeptideAtlas; Q6NXP0; -.
DR PRIDE; Q6NXP0; -.
DR ProteomicsDB; 66758; -.
DR Antibodypedia; 49952; 62 antibodies from 11 providers.
DR DNASU; 90288; -.
DR Ensembl; ENST00000326085.7; ENSP00000324241.3; ENSG00000172771.12.
DR Ensembl; ENST00000505956.6; ENSP00000420854.1; ENSG00000172771.12.
DR GeneID; 90288; -.
DR KEGG; hsa:90288; -.
DR MANE-Select; ENST00000505956.6; ENSP00000420854.1; NM_207307.3; NP_997190.1.
DR UCSC; uc003emg.3; human.
DR CTD; 90288; -.
DR DisGeNET; 90288; -.
DR GeneCards; EFCAB12; -.
DR HGNC; HGNC:28061; EFCAB12.
DR HPA; ENSG00000172771; Tissue enhanced (choroid plexus, fallopian tube).
DR neXtProt; NX_Q6NXP0; -.
DR OpenTargets; ENSG00000172771; -.
DR VEuPathDB; HostDB:ENSG00000172771; -.
DR eggNOG; ENOG502QSZS; Eukaryota.
DR GeneTree; ENSGT00390000014874; -.
DR HOGENOM; CLU_034466_1_0_1; -.
DR InParanoid; Q6NXP0; -.
DR OMA; HPDRWWP; -.
DR OrthoDB; 1312266at2759; -.
DR PhylomeDB; Q6NXP0; -.
DR TreeFam; TF336894; -.
DR PathwayCommons; Q6NXP0; -.
DR SignaLink; Q6NXP0; -.
DR BioGRID-ORCS; 90288; 7 hits in 1077 CRISPR screens.
DR GenomeRNAi; 90288; -.
DR Pharos; Q6NXP0; Tdark.
DR PRO; PR:Q6NXP0; -.
DR Proteomes; UP000005640; Chromosome 3.
DR RNAct; Q6NXP0; protein.
DR Bgee; ENSG00000172771; Expressed in right uterine tube and 106 other tissues.
DR ExpressionAtlas; Q6NXP0; baseline and differential.
DR Genevisible; Q6NXP0; HS.
DR GO; GO:0005509; F:calcium ion binding; IEA:InterPro.
DR InterPro; IPR011992; EF-hand-dom_pair.
DR InterPro; IPR002048; EF_hand_dom.
DR InterPro; IPR042847; EFC12.
DR PANTHER; PTHR47225; PTHR47225; 1.
DR SUPFAM; SSF47473; SSF47473; 1.
DR PROSITE; PS50222; EF_HAND_2; 1.
PE 1: Evidence at protein level;
KW Calcium; Metal-binding; Reference proteome.
FT CHAIN 1..572
FT /note="EF-hand calcium-binding domain-containing protein
FT 12"
FT /id="PRO_0000238660"
FT DOMAIN 196..231
FT /note="EF-hand"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00448"
FT REGION 62..85
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 146..169
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 147..162
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT BINDING 212
FT /ligand="Ca(2+)"
FT /ligand_id="ChEBI:CHEBI:29108"
FT /evidence="ECO:0000305"
FT VARIANT 36
FT /note="P -> L (in dbSNP:rs58932597)"
FT /id="VAR_061089"
FT VARIANT 66
FT /note="E -> G (in dbSNP:rs3774787)"
FT /id="VAR_033697"
FT VARIANT 215
FT /note="R -> G (in dbSNP:rs6790768)"
FT /id="VAR_048667"
FT VARIANT 280
FT /note="H -> R (in dbSNP:rs9836111)"
FT /id="VAR_061090"
FT VARIANT 541
FT /note="P -> S (in dbSNP:rs12637267)"
FT /id="VAR_048668"
SQ SEQUENCE 572 AA; 66551 MW; 7F2695D741E83A17 CRC64;
MDDDYEAYHS LFLSLLGLCP SKTPINENAP VFDPEPVIAH CFKQFQQKDF RLPQTRRRII
MVPRKEDQTP LNPASQPQAP PKPIPSFKVL EARDIQEQPE DRKTWLSQRS KLRQELESFG
DVKRWLENKP SITPSEAKVL HMIHEEQSAQ PNASQATTRT TRKKAPRLSR LSRQMVPQLQ
LPEPPALSVM YSYLHSRKIK ILEIFHKVGQ GENQRITREE FIAAVKAVGV PLKNQEVEDI
VIYLSSLGKH NTITMDILAN TYKQWSMAQQ RSSLATAREH YILAKHRDSL KGPLKKQEVD
SAPQLPKVDL LTVPAVDTQM ETRPMTLEEM EEVGKRYRER QRQHKLTIPS IQYTEQCHLV
RCGNRHFDEH CLPSTIHGDM RELIDSARRH NFLVYLQCWK LCKSYGLPLT EDILMKALLY
PGDKIIFQMD KVCPIRQPGG YYSDWKVFSP NLALLRSQGP GKSKRTDKKT PKKSKKMRFK
EFEEFTRKLK VKRSSGLQQT HPNSFWPGHL LDKLQLYLPT VATDRSLALF SCVQHQPHVY
PATYHPDHWW PLRNKNYMTH AHYDAAKVYY IN