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ADT1_RAT
ID   ADT1_RAT                Reviewed;         298 AA.
AC   Q05962;
DT   01-FEB-1994, integrated into UniProtKB/Swiss-Prot.
DT   23-JAN-2007, sequence version 3.
DT   03-AUG-2022, entry version 168.
DE   RecName: Full=ADP/ATP translocase 1 {ECO:0000305};
DE   AltName: Full=ADP,ATP carrier protein 1 {ECO:0000250|UniProtKB:P48962};
DE   AltName: Full=Adenine nucleotide translocator 1 {ECO:0000303|PubMed:8399300};
DE            Short=ANT 1 {ECO:0000303|PubMed:8399300};
DE   AltName: Full=Solute carrier family 25 member 4 {ECO:0000305};
GN   Name=Slc25a4 {ECO:0000312|RGD:620352};
GN   Synonyms=Aac1 {ECO:0000250|UniProtKB:P48962},
GN   Ant1 {ECO:0000303|PubMed:8399300};
OS   Rattus norvegicus (Rat).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC   Murinae; Rattus.
OX   NCBI_TaxID=10116;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [GENOMIC DNA / MRNA].
RC   STRAIN=Sprague-Dawley, and Wistar; TISSUE=Heart, and Liver;
RX   PubMed=8399300; DOI=10.1016/0005-2736(93)90248-x;
RA   Shinohara Y., Kamida M., Yamazaki N., Terada H.;
RT   "Isolation and characterization of cDNA clones and a genomic clone encoding
RT   rat mitochondrial adenine nucleotide translocator.";
RL   Biochim. Biophys. Acta 1152:192-196(1993).
RN   [2]
RP   PROTEIN SEQUENCE OF 2-31; 34-43; 73-80 AND 273-280, CLEAVAGE OF INITIATOR
RP   METHIONINE, ACETYLATION AT GLY-2, AND IDENTIFICATION BY MASS SPECTROMETRY.
RC   TISSUE=Pheochromocytoma;
RA   Bienvenut W.V., von Kriegsheim A.F., Kolch W.;
RL   Submitted (AUG-2006) to UniProtKB.
RN   [3]
RP   S-NITROSYLATION [LARGE SCALE ANALYSIS] AT CYS-160, AND IDENTIFICATION BY
RP   MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RX   PubMed=16418269; DOI=10.1073/pnas.0508412103;
RA   Hao G., Derakhshan B., Shi L., Campagne F., Gross S.S.;
RT   "SNOSID, a proteomic method for identification of cysteine S-nitrosylation
RT   sites in complex protein mixtures.";
RL   Proc. Natl. Acad. Sci. U.S.A. 103:1012-1017(2006).
RN   [4]
RP   PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-7; SER-149 AND SER-150, AND
RP   IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RX   PubMed=22673903; DOI=10.1038/ncomms1871;
RA   Lundby A., Secher A., Lage K., Nordsborg N.B., Dmytriyev A., Lundby C.,
RA   Olsen J.V.;
RT   "Quantitative maps of protein phosphorylation sites across 14 different rat
RT   organs and tissues.";
RL   Nat. Commun. 3:876-876(2012).
RN   [5]
RP   METHYLATION AT LYS-52.
RX   PubMed=31213526; DOI=10.1074/jbc.ra119.009045;
RA   Malecki J., Willemen H.L.D.M., Pinto R., Ho A.Y.Y., Moen A., Eijkelkamp N.,
RA   Falnes P.O.;
RT   "Human FAM173A is a mitochondrial lysine-specific methyltransferase that
RT   targets adenine nucleotide translocase and affects mitochondrial
RT   respiration.";
RL   J. Biol. Chem. 294:11654-11664(2019).
CC   -!- FUNCTION: ADP:ATP antiporter that mediates import of ADP into the
CC       mitochondrial matrix for ATP synthesis, and export of ATP out to fuel
CC       the cell (By similarity). Cycles between the cytoplasmic-open state (c-
CC       state) and the matrix-open state (m-state): operates by the alternating
CC       access mechanism with a single substrate-binding site intermittently
CC       exposed to either the cytosolic (c-state) or matrix (m-state) side of
CC       the inner mitochondrial membrane (By similarity). In addition to its
CC       ADP:ATP antiporter activity, also involved in mitochondrial uncoupling
CC       and mitochondrial permeability transition pore (mPTP) activity (By
CC       similarity). Plays a role in mitochondrial uncoupling by acting as a
CC       proton transporter: proton transport uncouples the proton flows via the
CC       electron transport chain and ATP synthase to reduce the efficiency of
CC       ATP production and cause mitochondrial thermogenesis. Proton
CC       transporter activity is inhibited by ADP:ATP antiporter activity,
CC       suggesting that SLC25A4/ANT1 acts as a master regulator of
CC       mitochondrial energy output by maintaining a delicate balance between
CC       ATP production (ADP:ATP antiporter activity) and thermogenesis (proton
CC       transporter activity). Proton transporter activity requires free fatty
CC       acids as cofactor, but does not transport it (By similarity). Also
CC       plays a key role in mPTP opening, a non-specific pore that enables free
CC       passage of the mitochondrial membranes to solutes of up to 1.5 kDa, and
CC       which contributes to cell death (By similarity). It is however unclear
CC       if SLC25A4/ANT1 constitutes a pore-forming component of mPTP or
CC       regulates it (By similarity). Acts as a regulator of mitophagy
CC       independently of ADP:ATP antiporter activity: promotes mitophagy via
CC       interaction with TIMM44, leading to inhibit the presequence translocase
CC       TIMM23, thereby promoting stabilization of PINK1 (By similarity).
CC       {ECO:0000250|UniProtKB:G2QNH0, ECO:0000250|UniProtKB:P12235,
CC       ECO:0000250|UniProtKB:P48962}.
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=ADP(in) + ATP(out) = ADP(out) + ATP(in); Xref=Rhea:RHEA:34999,
CC         ChEBI:CHEBI:30616, ChEBI:CHEBI:456216;
CC         Evidence={ECO:0000250|UniProtKB:P12235};
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=H(+)(in) = H(+)(out); Xref=Rhea:RHEA:34979, ChEBI:CHEBI:15378;
CC         Evidence={ECO:0000250|UniProtKB:P48962};
CC   -!- ACTIVITY REGULATION: The matrix-open state (m-state) is inhibited by
CC       the membrane-permeable bongkrekic acid (BKA) (By similarity). The
CC       cytoplasmic-open state (c-state) is inhibited by the membrane-
CC       impermeable toxic inhibitor carboxyatractyloside (CATR) (By
CC       similarity). Proton transporter activity is inhibited by ADP:ATP
CC       antiporter activity (By similarity). {ECO:0000250|UniProtKB:G2QNH0,
CC       ECO:0000250|UniProtKB:P12235, ECO:0000250|UniProtKB:P48962}.
CC   -!- SUBUNIT: Monomer (By similarity). Found in a complex with ARL2, ARL2BP
CC       and SLC25A4/ANT1. Interacts with ARL2BP. Interacts with TIMM44; leading
CC       to inhibit the presequence translocase TIMM23, thereby promoting
CC       stabilization of PINK1 (By similarity). {ECO:0000250|UniProtKB:G2QNH0,
CC       ECO:0000250|UniProtKB:P02722, ECO:0000250|UniProtKB:P48962}.
CC   -!- SUBCELLULAR LOCATION: Mitochondrion inner membrane
CC       {ECO:0000250|UniProtKB:P12235}; Multi-pass membrane protein
CC       {ECO:0000255}. Membrane {ECO:0000250|UniProtKB:P12235}; Multi-pass
CC       membrane protein {ECO:0000255}. Note=The complex formed with ARL2BP,
CC       ARL2 and SLC25A4/ANT1 is expressed in mitochondria (By similarity). May
CC       localize to non-mitochondrial membranes (By similarity).
CC       {ECO:0000250|UniProtKB:P12235, ECO:0000250|UniProtKB:P48962}.
CC   -!- DOMAIN: The transmembrane helices are not perpendicular to the plane of
CC       the membrane, but cross the membrane at an angle. Odd-numbered
CC       transmembrane helices exhibit a sharp kink, due to the presence of a
CC       conserved proline residue. {ECO:0000250|UniProtKB:P02722}.
CC   -!- PTM: Under cell death induction, transglutaminated by TGM2.
CC       Transglutamination leads to formation of covalent cross-links between a
CC       glutamine and the epsilon-amino group of a lysine residue, forming
CC       polymers. {ECO:0000250|UniProtKB:P48962}.
CC   -!- SIMILARITY: Belongs to the mitochondrial carrier (TC 2.A.29) family.
CC       {ECO:0000305}.
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DR   EMBL; X61667; CAA43842.1; -; Genomic_DNA.
DR   EMBL; D12770; BAA02237.1; -; mRNA.
DR   PIR; I60173; I60173.
DR   RefSeq; NP_445967.1; NM_053515.1.
DR   AlphaFoldDB; Q05962; -.
DR   SMR; Q05962; -.
DR   BioGRID; 250085; 7.
DR   CORUM; Q05962; -.
DR   IntAct; Q05962; 7.
DR   MINT; Q05962; -.
DR   STRING; 10116.ENSRNOP00000014704; -.
DR   CarbonylDB; Q05962; -.
DR   iPTMnet; Q05962; -.
DR   PhosphoSitePlus; Q05962; -.
DR   jPOST; Q05962; -.
DR   PaxDb; Q05962; -.
DR   PRIDE; Q05962; -.
DR   GeneID; 85333; -.
DR   KEGG; rno:85333; -.
DR   CTD; 291; -.
DR   RGD; 620352; Slc25a4.
DR   eggNOG; KOG0749; Eukaryota.
DR   InParanoid; Q05962; -.
DR   OrthoDB; 870903at2759; -.
DR   PhylomeDB; Q05962; -.
DR   Reactome; R-RNO-83936; Transport of nucleosides and free purine and pyrimidine bases across the plasma membrane.
DR   PRO; PR:Q05962; -.
DR   Proteomes; UP000002494; Unplaced.
DR   GO; GO:0032592; C:integral component of mitochondrial membrane; ISS:UniProtKB.
DR   GO; GO:0016020; C:membrane; ISO:RGD.
DR   GO; GO:0045121; C:membrane raft; IDA:CAFA.
DR   GO; GO:0005743; C:mitochondrial inner membrane; IDA:MGI.
DR   GO; GO:0005741; C:mitochondrial outer membrane; IDA:MGI.
DR   GO; GO:0005757; C:mitochondrial permeability transition pore complex; ISS:UniProtKB.
DR   GO; GO:0005739; C:mitochondrion; IDA:RGD.
DR   GO; GO:0005471; F:ATP:ADP antiporter activity; ISS:UniProtKB.
DR   GO; GO:0019899; F:enzyme binding; IPI:RGD.
DR   GO; GO:0017077; F:oxidative phosphorylation uncoupler activity; ISS:UniProtKB.
DR   GO; GO:0015078; F:proton transmembrane transporter activity; ISO:RGD.
DR   GO; GO:1990845; P:adaptive thermogenesis; ISS:UniProtKB.
DR   GO; GO:0015866; P:ADP transport; ISS:UniProtKB.
DR   GO; GO:0007568; P:aging; IEP:RGD.
DR   GO; GO:0008637; P:apoptotic mitochondrial changes; ISO:RGD.
DR   GO; GO:0007507; P:heart development; IEP:RGD.
DR   GO; GO:0001889; P:liver development; IEP:RGD.
DR   GO; GO:0140021; P:mitochondrial ADP transmembrane transport; ISS:UniProtKB.
DR   GO; GO:1990544; P:mitochondrial ATP transmembrane transport; ISS:UniProtKB.
DR   GO; GO:0010667; P:negative regulation of cardiac muscle cell apoptotic process; IDA:RGD.
DR   GO; GO:1902109; P:negative regulation of mitochondrial membrane permeability involved in apoptotic process; IDA:RGD.
DR   GO; GO:1901029; P:negative regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway; IBA:GO_Central.
DR   GO; GO:0060546; P:negative regulation of necroptotic process; ISO:RGD.
DR   GO; GO:0061051; P:positive regulation of cell growth involved in cardiac muscle cell development; IDA:RGD.
DR   GO; GO:1901526; P:positive regulation of mitophagy; ISS:UniProtKB.
DR   GO; GO:2000277; P:positive regulation of oxidative phosphorylation uncoupler activity; IMP:RGD.
DR   GO; GO:0046902; P:regulation of mitochondrial membrane permeability; ISO:RGD.
DR   GO; GO:0070555; P:response to interleukin-1; IEP:RGD.
DR   Gene3D; 1.50.40.10; -; 1.
DR   InterPro; IPR002113; ADT_euk_type.
DR   InterPro; IPR002067; Mit_carrier.
DR   InterPro; IPR018108; Mitochondrial_sb/sol_carrier.
DR   InterPro; IPR023395; Mt_carrier_dom_sf.
DR   PANTHER; PTHR45635; PTHR45635; 1.
DR   Pfam; PF00153; Mito_carr; 3.
DR   PRINTS; PR00927; ADPTRNSLCASE.
DR   PRINTS; PR00926; MITOCARRIER.
DR   SUPFAM; SSF103506; SSF103506; 1.
DR   PROSITE; PS50920; SOLCAR; 3.
PE   1: Evidence at protein level;
KW   Acetylation; Antiport; Direct protein sequencing; Membrane; Methylation;
KW   Mitochondrion; Mitochondrion inner membrane; Phosphoprotein;
KW   Reference proteome; Repeat; S-nitrosylation; Transmembrane;
KW   Transmembrane helix; Transport.
FT   INIT_MET        1
FT                   /note="Removed"
FT                   /evidence="ECO:0000269|Ref.2"
FT   CHAIN           2..298
FT                   /note="ADP/ATP translocase 1"
FT                   /id="PRO_0000090577"
FT   TOPO_DOM        1..7
FT                   /note="Mitochondrial intermembrane"
FT                   /evidence="ECO:0000305"
FT   TRANSMEM        8..37
FT                   /note="Helical; Name=1"
FT                   /evidence="ECO:0000250|UniProtKB:P02722"
FT   TOPO_DOM        38..74
FT                   /note="Mitochondrial matrix"
FT                   /evidence="ECO:0000305"
FT   TRANSMEM        75..99
FT                   /note="Helical; Name=2"
FT                   /evidence="ECO:0000250|UniProtKB:P02722"
FT   TOPO_DOM        100..109
FT                   /note="Mitochondrial intermembrane"
FT                   /evidence="ECO:0000305"
FT   TRANSMEM        110..130
FT                   /note="Helical; Name=3"
FT                   /evidence="ECO:0000250|UniProtKB:P02722"
FT   TOPO_DOM        131..178
FT                   /note="Mitochondrial matrix"
FT                   /evidence="ECO:0000305"
FT   TRANSMEM        179..199
FT                   /note="Helical; Name=4"
FT                   /evidence="ECO:0000250|UniProtKB:P02722"
FT   TOPO_DOM        200..210
FT                   /note="Mitochondrial intermembrane"
FT                   /evidence="ECO:0000305"
FT   TRANSMEM        211..231
FT                   /note="Helical; Name=5"
FT                   /evidence="ECO:0000250|UniProtKB:P02722"
FT   TOPO_DOM        232..273
FT                   /note="Mitochondrial matrix"
FT                   /evidence="ECO:0000305"
FT   TRANSMEM        274..291
FT                   /note="Helical; Name=6"
FT                   /evidence="ECO:0000250|UniProtKB:P02722"
FT   TOPO_DOM        292..298
FT                   /note="Mitochondrial intermembrane"
FT                   /evidence="ECO:0000305"
FT   REPEAT          6..98
FT                   /note="Solcar 1"
FT   REPEAT          111..201
FT                   /note="Solcar 2"
FT   REPEAT          212..297
FT                   /note="Solcar 3"
FT   REGION          235..240
FT                   /note="Important for transport activity"
FT                   /evidence="ECO:0000250|UniProtKB:P12235"
FT   MOTIF           235..240
FT                   /note="Nucleotide carrier signature motif"
FT                   /evidence="ECO:0000250|UniProtKB:P02722"
FT   BINDING         80
FT                   /ligand="ADP"
FT                   /ligand_id="ChEBI:CHEBI:456216"
FT                   /evidence="ECO:0000250|UniProtKB:P02722"
FT   BINDING         92
FT                   /ligand="ADP"
FT                   /ligand_id="ChEBI:CHEBI:456216"
FT                   /evidence="ECO:0000250|UniProtKB:P02722"
FT   BINDING         235
FT                   /ligand="ADP"
FT                   /ligand_id="ChEBI:CHEBI:456216"
FT                   /evidence="ECO:0000250|UniProtKB:P02722"
FT   MOD_RES         2
FT                   /note="N-acetylglycine"
FT                   /evidence="ECO:0000269|Ref.2"
FT   MOD_RES         7
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:22673903"
FT   MOD_RES         52
FT                   /note="N6,N6,N6-trimethyllysine"
FT                   /evidence="ECO:0000269|PubMed:31213526"
FT   MOD_RES         147
FT                   /note="N6-succinyllysine"
FT                   /evidence="ECO:0000250|UniProtKB:P48962"
FT   MOD_RES         149
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:22673903"
FT   MOD_RES         150
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:22673903"
FT   MOD_RES         160
FT                   /note="S-nitrosocysteine"
FT                   /evidence="ECO:0007744|PubMed:16418269"
FT   MOD_RES         245
FT                   /note="N6-succinyllysine"
FT                   /evidence="ECO:0000250|UniProtKB:P48962"
FT   MOD_RES         272
FT                   /note="N6-succinyllysine"
FT                   /evidence="ECO:0000250|UniProtKB:P48962"
SQ   SEQUENCE   298 AA;  32989 MW;  66704FF78C6BC320 CRC64;
     MGDQALSFLK DFLAGGIAAA VSKTAVAPIE RVKLLLQVQH ASKQISAEKQ YKGIIDCVVR
     IPKEQGFLSF WRGNLANVIR YFPTQALNFA FKDKYKQIFL GGVDRHKQFW RYFAGNLASG
     GAAGATSLCF VYPLDFARTR LAADVGKGSS QREFNGLGDC LTKIFKSDGL KGLYQGFSVS
     VQGIIIYRAA YFGVYDTAKG MLPDPKNVHI IVSWMIAQSV TAVAGLVSYP FDTVRRRMMM
     QSGRKGADIM YTGTVDCWRK IAKDEGRKAF FKGAWSNVLR GMGGAFVLVL YDEIKKYV
 
 
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