EFG1P_CANAL
ID EFG1P_CANAL Reviewed; 237 AA.
AC Q5AK42; A0A1D8PP46;
DT 29-APR-2008, integrated into UniProtKB/Swiss-Prot.
DT 26-APR-2005, sequence version 1.
DT 03-AUG-2022, entry version 76.
DE RecName: Full=rRNA-processing protein EFG1;
GN OrderedLocusNames=CAALFM_C504910WA; ORFNames=CaO19.11461, CaO19.3978;
OS Candida albicans (strain SC5314 / ATCC MYA-2876) (Yeast).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes;
OC Saccharomycetales; Debaryomycetaceae; Candida/Lodderomyces clade; Candida.
OX NCBI_TaxID=237561;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=SC5314 / ATCC MYA-2876;
RX PubMed=15123810; DOI=10.1073/pnas.0401648101;
RA Jones T., Federspiel N.A., Chibana H., Dungan J., Kalman S., Magee B.B.,
RA Newport G., Thorstenson Y.R., Agabian N., Magee P.T., Davis R.W.,
RA Scherer S.;
RT "The diploid genome sequence of Candida albicans.";
RL Proc. Natl. Acad. Sci. U.S.A. 101:7329-7334(2004).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=SC5314 / ATCC MYA-2876;
RX PubMed=17419877; DOI=10.1186/gb-2007-8-4-r52;
RA van het Hoog M., Rast T.J., Martchenko M., Grindle S., Dignard D.,
RA Hogues H., Cuomo C., Berriman M., Scherer S., Magee B.B., Whiteway M.,
RA Chibana H., Nantel A., Magee P.T.;
RT "Assembly of the Candida albicans genome into sixteen supercontigs aligned
RT on the eight chromosomes.";
RL Genome Biol. 8:RESEARCH52.1-RESEARCH52.12(2007).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA], AND GENOME REANNOTATION.
RC STRAIN=SC5314 / ATCC MYA-2876;
RX PubMed=24025428; DOI=10.1186/gb-2013-14-9-r97;
RA Muzzey D., Schwartz K., Weissman J.S., Sherlock G.;
RT "Assembly of a phased diploid Candida albicans genome facilitates allele-
RT specific measurements and provides a simple model for repeat and indel
RT structure.";
RL Genome Biol. 14:RESEARCH97.1-RESEARCH97.14(2013).
CC -!- FUNCTION: Involved in rRNA processing. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus, nucleolus {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the EFG1 family. {ECO:0000305}.
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DR EMBL; CP017627; AOW29895.1; -; Genomic_DNA.
DR RefSeq; XP_721887.1; XM_716794.1.
DR AlphaFoldDB; Q5AK42; -.
DR SMR; Q5AK42; -.
DR STRING; 237561.Q5AK42; -.
DR GeneID; 3636417; -.
DR KEGG; cal:CAALFM_C504910WA; -.
DR CGD; CAL0000198404; orf19.11461.
DR VEuPathDB; FungiDB:C5_04910W_A; -.
DR eggNOG; KOG4484; Eukaryota.
DR HOGENOM; CLU_066912_2_0_1; -.
DR InParanoid; Q5AK42; -.
DR OMA; HMIRFFE; -.
DR OrthoDB; 1514264at2759; -.
DR PRO; PR:Q5AK42; -.
DR Proteomes; UP000000559; Chromosome 5.
DR GO; GO:0005730; C:nucleolus; IBA:GO_Central.
DR GO; GO:0030688; C:preribosome, small subunit precursor; IBA:GO_Central.
DR GO; GO:0000462; P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IBA:GO_Central.
DR InterPro; IPR019310; Efg1.
DR Pfam; PF10153; Efg1; 1.
PE 3: Inferred from homology;
KW Coiled coil; Nucleus; Reference proteome; rRNA processing.
FT CHAIN 1..237
FT /note="rRNA-processing protein EFG1"
FT /id="PRO_0000330265"
FT REGION 1..24
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 206..237
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 53..113
FT /evidence="ECO:0000255"
FT COILED 166..186
FT /evidence="ECO:0000255"
FT COMPBIAS 1..18
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 206..222
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 223..237
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 237 AA; 27761 MW; 603037859D91C102 CRC64;
MPKTVKNPKN NKSRSRGAPI QVAESIGSGS AKIKKKIRDI ERLIKKNPNL PADKKIEYDR
ALKGLKVELQ NSQVQNKAKV LAKKYHMVRF FERKKAVRKL KNLRKEFERI SQTGIRKDIK
KARKQLRHGE IDLAYVILFP KTEKYISLYP SPNDEDQTDP NVIKGLKITE ERRREFRKYI
EKLMEEGKLP FSIDDALQGK NIRLDNDKTQ KAVLTEEIDA PEQKQDEQQE EQDDFFE