EFGM_RAT
ID EFGM_RAT Reviewed; 751 AA.
AC Q07803; Q5U347;
DT 01-OCT-1994, integrated into UniProtKB/Swiss-Prot.
DT 13-OCT-2009, sequence version 2.
DT 03-AUG-2022, entry version 150.
DE RecName: Full=Elongation factor G, mitochondrial {ECO:0000255|HAMAP-Rule:MF_03061};
DE Short=EF-Gmt {ECO:0000255|HAMAP-Rule:MF_03061};
DE AltName: Full=Elongation factor G 1, mitochondrial {ECO:0000255|HAMAP-Rule:MF_03061};
DE Short=mEF-G 1 {ECO:0000255|HAMAP-Rule:MF_03061};
DE AltName: Full=Elongation factor G1 {ECO:0000255|HAMAP-Rule:MF_03061};
DE Flags: Precursor;
GN Name=Gfm1; Synonyms=Efg, Efg1, Gfm;
OS Rattus norvegicus (Rat).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC Murinae; Rattus.
OX NCBI_TaxID=10116;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RX PubMed=8332461; DOI=10.1093/nar/21.11.2641;
RA Barker C.S., Makris A., Patriotis C., Bear S.E., Tsichlis P.N.;
RT "Identification of the gene encoding the mitochondrial elongation factor G
RT in mammals.";
RL Nucleic Acids Res. 21:2641-2647(1993).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RA Mural R.J., Adams M.D., Myers E.W., Smith H.O., Venter J.C.;
RL Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases.
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Heart;
RX PubMed=15489334; DOI=10.1101/gr.2596504;
RG The MGC Project Team;
RT "The status, quality, and expansion of the NIH full-length cDNA project:
RT the Mammalian Gene Collection (MGC).";
RL Genome Res. 14:2121-2127(2004).
RN [4]
RP PROTEIN SEQUENCE OF 214-222 AND 292-303, AND IDENTIFICATION BY MASS
RP SPECTROMETRY.
RC STRAIN=Sprague-Dawley; TISSUE=Hippocampus;
RA Lubec G., Diao W.;
RL Submitted (APR-2007) to UniProtKB.
CC -!- FUNCTION: Mitochondrial GTPase that catalyzes the GTP-dependent
CC ribosomal translocation step during translation elongation. During this
CC step, the ribosome changes from the pre-translocational (PRE) to the
CC post-translocational (POST) state as the newly formed A-site-bound
CC peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E
CC sites, respectively. Catalyzes the coordinated movement of the two tRNA
CC molecules, the mRNA and conformational changes in the ribosome. Does
CC not mediate the disassembly of ribosomes from messenger RNA at the
CC termination of mitochondrial protein biosynthesis. {ECO:0000255|HAMAP-
CC Rule:MF_03061}.
CC -!- PATHWAY: Protein biosynthesis; polypeptide chain elongation.
CC {ECO:0000255|HAMAP-Rule:MF_03061}.
CC -!- SUBCELLULAR LOCATION: Mitochondrion.
CC -!- TISSUE SPECIFICITY: Detected in all tissues with the highest level in
CC liver, thymus and brain.
CC -!- SIMILARITY: Belongs to the TRAFAC class translation factor GTPase
CC superfamily. Classic translation factor GTPase family. EF-G/EF-2
CC subfamily. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAA41107.1; Type=Frameshift; Evidence={ECO:0000305};
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DR EMBL; L14684; AAA41107.1; ALT_FRAME; mRNA.
DR EMBL; CH473976; EDM00923.1; -; Genomic_DNA.
DR EMBL; BC085721; AAH85721.1; -; mRNA.
DR PIR; S40780; S40780.
DR RefSeq; NP_446077.1; NM_053625.1.
DR AlphaFoldDB; Q07803; -.
DR SMR; Q07803; -.
DR BioGRID; 250256; 1.
DR STRING; 10116.ENSRNOP00000040081; -.
DR iPTMnet; Q07803; -.
DR PhosphoSitePlus; Q07803; -.
DR jPOST; Q07803; -.
DR PaxDb; Q07803; -.
DR PRIDE; Q07803; -.
DR GeneID; 114017; -.
DR KEGG; rno:114017; -.
DR UCSC; RGD:631396; rat.
DR CTD; 85476; -.
DR RGD; 631396; Gfm1.
DR VEuPathDB; HostDB:ENSRNOG00000012873; -.
DR eggNOG; KOG0465; Eukaryota.
DR HOGENOM; CLU_002794_4_1_1; -.
DR InParanoid; Q07803; -.
DR OMA; AATTCHW; -.
DR OrthoDB; 637899at2759; -.
DR PhylomeDB; Q07803; -.
DR TreeFam; TF105631; -.
DR Reactome; R-RNO-5389840; Mitochondrial translation elongation.
DR UniPathway; UPA00345; -.
DR PRO; PR:Q07803; -.
DR Proteomes; UP000002494; Chromosome 2.
DR Proteomes; UP000234681; Chromosome 2.
DR Bgee; ENSRNOG00000012873; Expressed in heart and 20 other tissues.
DR ExpressionAtlas; Q07803; baseline and differential.
DR Genevisible; Q07803; RN.
DR GO; GO:0005739; C:mitochondrion; IBA:GO_Central.
DR GO; GO:0005525; F:GTP binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003924; F:GTPase activity; ISS:UniProtKB.
DR GO; GO:0003746; F:translation elongation factor activity; ISS:UniProtKB.
DR GO; GO:0070125; P:mitochondrial translational elongation; ISS:UniProtKB.
DR CDD; cd16262; EFG_III; 1.
DR CDD; cd01434; EFG_mtEFG1_IV; 1.
DR CDD; cd04097; mtEFG1_C; 1.
DR Gene3D; 3.30.230.10; -; 1.
DR Gene3D; 3.40.50.300; -; 1.
DR HAMAP; MF_00054_B; EF_G_EF_2_B; 1.
DR InterPro; IPR045044; EFG1-like.
DR InterPro; IPR041095; EFG_II.
DR InterPro; IPR009022; EFG_III.
DR InterPro; IPR035647; EFG_III/V.
DR InterPro; IPR035649; EFG_V.
DR InterPro; IPR000640; EFG_V-like.
DR InterPro; IPR004161; EFTu-like_2.
DR InterPro; IPR031157; G_TR_CS.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR020568; Ribosomal_S5_D2-typ_fold.
DR InterPro; IPR014721; Ribosomal_S5_D2-typ_fold_subgr.
DR InterPro; IPR005225; Small_GTP-bd_dom.
DR InterPro; IPR000795; T_Tr_GTP-bd_dom.
DR InterPro; IPR009000; Transl_B-barrel_sf.
DR InterPro; IPR004540; Transl_elong_EFG/EF2.
DR InterPro; IPR005517; Transl_elong_EFG/EF2_IV.
DR PANTHER; PTHR43636; PTHR43636; 1.
DR Pfam; PF00679; EFG_C; 1.
DR Pfam; PF14492; EFG_III; 1.
DR Pfam; PF03764; EFG_IV; 1.
DR Pfam; PF00009; GTP_EFTU; 1.
DR Pfam; PF03144; GTP_EFTU_D2; 1.
DR PRINTS; PR00315; ELONGATNFCT.
DR SMART; SM00838; EFG_C; 1.
DR SMART; SM00889; EFG_IV; 1.
DR SUPFAM; SSF50447; SSF50447; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
DR SUPFAM; SSF54211; SSF54211; 1.
DR SUPFAM; SSF54980; SSF54980; 2.
DR TIGRFAMs; TIGR00484; EF-G; 1.
DR TIGRFAMs; TIGR00231; small_GTP; 1.
DR PROSITE; PS00301; G_TR_1; 1.
DR PROSITE; PS51722; G_TR_2; 1.
PE 1: Evidence at protein level;
KW Acetylation; Direct protein sequencing; Elongation factor; GTP-binding;
KW Mitochondrion; Nucleotide-binding; Phosphoprotein; Protein biosynthesis;
KW Reference proteome; Transit peptide.
FT TRANSIT 1..37
FT /note="Mitochondrion"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_03061"
FT CHAIN 38..751
FT /note="Elongation factor G, mitochondrial"
FT /id="PRO_0000007443"
FT DOMAIN 45..322
FT /note="tr-type G"
FT BINDING 54..61
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_03061"
FT BINDING 121..125
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_03061"
FT BINDING 175..178
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_03061"
FT MOD_RES 92
FT /note="Phosphoserine"
FT /evidence="ECO:0000250|UniProtKB:Q96RP9"
FT MOD_RES 176
FT /note="N6-acetyllysine"
FT /evidence="ECO:0000250|UniProtKB:Q96RP9"
FT CONFLICT 252
FT /note="Q -> P (in Ref. 1; AAA41107)"
FT /evidence="ECO:0000305"
FT CONFLICT 306
FT /note="G -> R (in Ref. 1; AAA41107)"
FT /evidence="ECO:0000305"
FT CONFLICT 335
FT /note="S -> L (in Ref. 1; AAA41107)"
FT /evidence="ECO:0000305"
FT CONFLICT 339
FT /note="N -> K (in Ref. 1; AAA41107)"
FT /evidence="ECO:0000305"
FT CONFLICT 564..565
FT /note="YT -> LP (in Ref. 1; AAA41107)"
FT /evidence="ECO:0000305"
FT CONFLICT 739
FT /note="T -> I (in Ref. 1; AAA41107)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 751 AA; 83457 MW; A4DD3BD637B295E1 CRC64;
MRLLRITAGL GRGPLPRVPA ILGWQGKQAN WKTYRWCSSG SIPNEKIRNI GISAHIDSGK
TTLTERVLYY TGRIATMHEV KGKDGVGAVM DSMELERQRG ITIQSAATYT MWRDVNINII
DTPGHVDFTI EVERALRVLD GAVLVLCAVG GVQCQTMTVS RQMKRYNVPF LTFINKLDRM
GSNPARALQQ MRSKLNHNAA FVQIPIGLEG DFKGIIDLIE ERAIYFDGDF GQIVRYDEIP
ADLRAAAADH RQELIECVAN SDEQLGELFL EEKIPSVSDL KLAIRRATLS RSFTPVFLGS
ALKNKGVQPL LDAVLEFLPN PSEVQNYALL NQNDSKEKNK ILMNPKRDDS HPFVGLAFKL
EAGRFGQLTY VRNYQGELKK GSTIYNTRTG KKVRVQRLVR MHADMMEDVE EVYAGDICAL
FGIDCASGDT FTNKDNSDLS MESIHVPDPV ISVAMKPSNK NDLEKFSKGI ARFTREDPTF
KVHFDTESKE TIVSGMGELH LEIYAQRMER EYGCPCITGK PKVAFRETVT APVPFDFTHK
KQSGGAGQYG KVIGVLEPLA PEDYTKLEFS DETFGANVPK QFVPAVEKGF LDACEKGPLS
GHKLSGLRFV LQDGAHHMVD SNEISFIRAG EGALKQALAS ATLCIIEPIM SVEVIAPNEF
QGAVFAGINR RHGVITGQDG IEDYFTLYAD VPLNNMFGYS TELRSCTEGK GEYTMEYNRY
QPCSPSTQEE LVNKYLEATG QLPVKKGKAK N