AEE9_ARATH
ID AEE9_ARATH Reviewed; 550 AA.
AC Q9LPK6;
DT 22-FEB-2012, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 03-AUG-2022, entry version 122.
DE RecName: Full=Probable acyl-activating enzyme 9;
DE EC=6.2.1.-;
DE AltName: Full=AMP-binding protein 9;
DE Short=AtAMPBP9;
GN Name=AEE9; Synonyms=AMPBP9; OrderedLocusNames=At1g21540; ORFNames=F24J8.1;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RX PubMed=12177484; DOI=10.1104/pp.003269;
RA Shockey J.M., Fulda M.S., Browse J.A.;
RT "Arabidopsis contains nine long-chain acyl-coenzyme A synthetase genes that
RT participate in fatty acid and glycerolipid metabolism.";
RL Plant Physiol. 129:1710-1722(2002).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [5]
RP TISSUE SPECIFICITY, GENE FAMILY, AND NOMENCLATURE.
RX PubMed=12805634; DOI=10.1104/pp.103.020552;
RA Shockey J.M., Fulda M.S., Browse J.;
RT "Arabidopsis contains a large superfamily of acyl-activating enzymes.
RT Phylogenetic and biochemical analysis reveals a new class of acyl-coenzyme
RT a synthetases.";
RL Plant Physiol. 132:1065-1076(2003).
CC -!- FUNCTION: May act as an acid--thiol ligase that activates carboxylic
CC acids by forming acyl-CoAs. {ECO:0000250}.
CC -!- TISSUE SPECIFICITY: Expressed in leaves, flowers and developing seeds.
CC {ECO:0000269|PubMed:12805634}.
CC -!- SIMILARITY: Belongs to the ATP-dependent AMP-binding enzyme family.
CC {ECO:0000305}.
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DR EMBL; AF503768; AAM28626.1; -; mRNA.
DR EMBL; AC015447; AAF87900.1; -; Genomic_DNA.
DR EMBL; CP002684; AEE30115.1; -; Genomic_DNA.
DR EMBL; AY072217; AAL60038.1; -; mRNA.
DR EMBL; AY133859; AAM91793.1; -; mRNA.
DR PIR; C86348; C86348.
DR RefSeq; NP_173573.1; NM_102003.4.
DR AlphaFoldDB; Q9LPK6; -.
DR SMR; Q9LPK6; -.
DR STRING; 3702.AT1G21540.1; -.
DR PaxDb; Q9LPK6; -.
DR PRIDE; Q9LPK6; -.
DR ProteomicsDB; 244656; -.
DR EnsemblPlants; AT1G21540.1; AT1G21540.1; AT1G21540.
DR GeneID; 838755; -.
DR Gramene; AT1G21540.1; AT1G21540.1; AT1G21540.
DR KEGG; ath:AT1G21540; -.
DR Araport; AT1G21540; -.
DR TAIR; locus:2027032; AT1G21540.
DR eggNOG; KOG1176; Eukaryota.
DR HOGENOM; CLU_000022_59_5_1; -.
DR InParanoid; Q9LPK6; -.
DR OMA; VSGPCVM; -.
DR OrthoDB; 312083at2759; -.
DR PhylomeDB; Q9LPK6; -.
DR BioCyc; ARA:AT1G21540-MON; -.
DR PRO; PR:Q9LPK6; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q9LPK6; baseline and differential.
DR Genevisible; Q9LPK6; AT.
DR GO; GO:0016874; F:ligase activity; IEA:UniProtKB-KW.
DR GO; GO:0006631; P:fatty acid metabolic process; IEA:UniProtKB-KW.
DR Gene3D; 3.30.300.30; -; 1.
DR Gene3D; 3.40.50.12780; -; 1.
DR InterPro; IPR025110; AMP-bd_C.
DR InterPro; IPR045851; AMP-bd_C_sf.
DR InterPro; IPR020845; AMP-binding_CS.
DR InterPro; IPR000873; AMP-dep_Synth/Lig.
DR InterPro; IPR042099; ANL_N_sf.
DR InterPro; IPR018247; EF_Hand_1_Ca_BS.
DR Pfam; PF00501; AMP-binding; 1.
DR Pfam; PF13193; AMP-binding_C; 1.
DR PROSITE; PS00455; AMP_BINDING; 1.
DR PROSITE; PS00018; EF_HAND_1; 1.
PE 2: Evidence at transcript level;
KW Fatty acid metabolism; Ligase; Lipid metabolism; Reference proteome.
FT CHAIN 1..550
FT /note="Probable acyl-activating enzyme 9"
FT /id="PRO_0000415720"
SQ SEQUENCE 550 AA; 60634 MW; 4433676ED8916215 CRC64;
MELLLPHPSN STPLTVLGFL DRAASVYGDC PSILHTTNTV HTWSETHNRC LRIASALTSS
SLGINRGQVV SVVGPNVPSV YELQFAVPMS GAILNNINPR LDAHALSVLL RHSESKLVFV
DPNSISVVLE AVSFMRQNEK PHLVLLDDDQ EDGSLSPSAA SDFLDTYQGV MERGDSRFKW
IRPQTEWQPM ILNYTSGTTS SPKGVVLSHR AIFMLTVSSL LDWHFPNRPV YLWTLPMFHA
NGWGYTWGTA AVGATNVCTR RVDAPTIYDL IDKHHVTHMC AAPMVLNMLT NYPSRKPLKN
PVQVMTAGAP PPAAIISRAE TLGFNVGHGY GLTETGGPVV SCAWKAEWDH LDPLERARLK
SRQGVRTIGF AEVDVRDPRT GKSVEHDGVS VGEIVLKGGS VMLGYYKDPE GTAACMREDG
WFYSGDVGVI HEDGYLEVKD RSKDVIICGG ENISSAEVET VLYTNPVVKE AAVVAKPDKM
WGETPCAFVS LKYDSNGNGL VTEREIREFC KTRLPKYMVP RKVIFQEELP KTSTGKIQKF
LLRQMAKSLP