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AFAD_MOUSE
ID   AFAD_MOUSE              Reviewed;        1820 AA.
AC   Q9QZQ1;
DT   11-OCT-2004, integrated into UniProtKB/Swiss-Prot.
DT   10-JUL-2007, sequence version 3.
DT   03-AUG-2022, entry version 169.
DE   RecName: Full=Afadin;
DE   AltName: Full=Afadin adherens junction formation factor {ECO:0000312|MGI:MGI:1314653};
DE   AltName: Full=Protein Af-6;
GN   Name=Afdn {ECO:0000312|MGI:MGI:1314653}; Synonyms=Af6, Mllt4;
OS   Mus musculus (Mouse).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC   Murinae; Mus; Mus.
OX   NCBI_TaxID=10090;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=C57BL/6J;
RX   PubMed=19468303; DOI=10.1371/journal.pbio.1000112;
RA   Church D.M., Goodstadt L., Hillier L.W., Zody M.C., Goldstein S., She X.,
RA   Bult C.J., Agarwala R., Cherry J.L., DiCuccio M., Hlavina W., Kapustin Y.,
RA   Meric P., Maglott D., Birtle Z., Marques A.C., Graves T., Zhou S.,
RA   Teague B., Potamousis K., Churas C., Place M., Herschleb J., Runnheim R.,
RA   Forrest D., Amos-Landgraf J., Schwartz D.C., Cheng Z., Lindblad-Toh K.,
RA   Eichler E.E., Ponting C.P.;
RT   "Lineage-specific biology revealed by a finished genome assembly of the
RT   mouse.";
RL   PLoS Biol. 7:E1000112-E1000112(2009).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [MRNA] OF 1-320 (ISOFORM 1), FUNCTION, TISSUE
RP   SPECIFICITY, DEVELOPMENTAL STAGE, AND DISRUPTION PHENOTYPE.
RC   STRAIN=C57BL/6J;
RX   PubMed=10477764; DOI=10.1083/jcb.146.5.1117;
RA   Ikeda W., Nakanishi H., Miyoshi J., Mandai K., Ishizaki H., Tanaka M.,
RA   Togawa A., Takahashi K., Nishioka H., Yoshida H., Mizoguchi A.,
RA   Nishikawa S., Takai Y.;
RT   "Afadin: a key molecule essential for structural organization of cell-cell
RT   junctions of polarized epithelia during embryogenesis.";
RL   J. Cell Biol. 146:1117-1132(1999).
RN   [3]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 36-900 (ISOFORM 3).
RC   TISSUE=Leukemia;
RX   PubMed=16141072; DOI=10.1126/science.1112014;
RA   Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N.,
RA   Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K.,
RA   Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J.,
RA   Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R.,
RA   Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T.,
RA   Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A.,
RA   Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B.,
RA   Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M.,
RA   Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S.,
RA   Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E.,
RA   Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D.,
RA   Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M.,
RA   Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H.,
RA   Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V.,
RA   Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S.,
RA   Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H.,
RA   Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N.,
RA   Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F.,
RA   Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G.,
RA   Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z.,
RA   Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C.,
RA   Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y.,
RA   Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S.,
RA   Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K.,
RA   Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R.,
RA   van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H.,
RA   Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M.,
RA   Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C.,
RA   Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S.,
RA   Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K.,
RA   Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M.,
RA   Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C.,
RA   Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A.,
RA   Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.;
RT   "The transcriptional landscape of the mammalian genome.";
RL   Science 309:1559-1563(2005).
RN   [4]
RP   INTERACTION WITH NECTIN3.
RX   PubMed=10744716; DOI=10.1074/jbc.275.14.10291;
RA   Satoh-Horikawa K., Nakanishi H., Takahashi K., Miyahara M., Nishimura M.,
RA   Tachibana K., Mizoguchi A., Takai Y.;
RT   "Nectin-3: a new member of immunoglobulin-like cell adhesion molecules that
RT   shows homophilic and heterophilic cell-cell adhesion activities.";
RL   J. Biol. Chem. 275:10291-10299(2000).
RN   [5]
RP   IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RC   TISSUE=Brain;
RX   PubMed=16452087; DOI=10.1074/mcp.t500041-mcp200;
RA   Trinidad J.C., Specht C.G., Thalhammer A., Schoepfer R., Burlingame A.L.;
RT   "Comprehensive identification of phosphorylation sites in postsynaptic
RT   density preparations.";
RL   Mol. Cell. Proteomics 5:914-922(2006).
RN   [6]
RP   PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-216, AND IDENTIFICATION BY
RP   MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RC   TISSUE=Liver;
RX   PubMed=17242355; DOI=10.1073/pnas.0609836104;
RA   Villen J., Beausoleil S.A., Gerber S.A., Gygi S.P.;
RT   "Large-scale phosphorylation analysis of mouse liver.";
RL   Proc. Natl. Acad. Sci. U.S.A. 104:1488-1493(2007).
RN   [7]
RP   PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-557, AND IDENTIFICATION BY
RP   MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RX   PubMed=19144319; DOI=10.1016/j.immuni.2008.11.006;
RA   Trost M., English L., Lemieux S., Courcelles M., Desjardins M.,
RA   Thibault P.;
RT   "The phagosomal proteome in interferon-gamma-activated macrophages.";
RL   Immunity 30:143-154(2009).
RN   [8]
RP   PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-1107 AND SER-1182, AND
RP   IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RC   TISSUE=Embryonic fibroblast;
RX   PubMed=19131326; DOI=10.1074/mcp.m800451-mcp200;
RA   Sweet S.M., Bailey C.M., Cunningham D.L., Heath J.K., Cooper H.J.;
RT   "Large scale localization of protein phosphorylation by use of electron
RT   capture dissociation mass spectrometry.";
RL   Mol. Cell. Proteomics 8:904-912(2009).
RN   [9]
RP   PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-216; SER-1083; SER-1107;
RP   SER-1126; SER-1143; SER-1172; SER-1182; SER-1510; SER-1719; SER-1770 AND
RP   SER-1795, AND IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RC   TISSUE=Brain, Brown adipose tissue, Heart, Kidney, Liver, Lung, Pancreas,
RC   Spleen, and Testis;
RX   PubMed=21183079; DOI=10.1016/j.cell.2010.12.001;
RA   Huttlin E.L., Jedrychowski M.P., Elias J.E., Goswami T., Rad R.,
RA   Beausoleil S.A., Villen J., Haas W., Sowa M.E., Gygi S.P.;
RT   "A tissue-specific atlas of mouse protein phosphorylation and expression.";
RL   Cell 143:1174-1189(2010).
RN   [10]
RP   ACETYLATION [LARGE SCALE ANALYSIS] AT LYS-1803, AND IDENTIFICATION BY MASS
RP   SPECTROMETRY [LARGE SCALE ANALYSIS].
RC   TISSUE=Embryonic fibroblast;
RX   PubMed=23806337; DOI=10.1016/j.molcel.2013.06.001;
RA   Park J., Chen Y., Tishkoff D.X., Peng C., Tan M., Dai L., Xie Z., Zhang Y.,
RA   Zwaans B.M., Skinner M.E., Lombard D.B., Zhao Y.;
RT   "SIRT5-mediated lysine desuccinylation impacts diverse metabolic
RT   pathways.";
RL   Mol. Cell 50:919-930(2013).
RN   [11]
RP   INTERACTION WITH ADAM10, AND SUBCELLULAR LOCATION.
RX   PubMed=30463011; DOI=10.1016/j.celrep.2018.10.088;
RA   Shah J., Rouaud F., Guerrera D., Vasileva E., Popov L.M., Kelley W.L.,
RA   Rubinstein E., Carette J.E., Amieva M.R., Citi S.;
RT   "A Dock-and-Lock Mechanism Clusters ADAM10 at Cell-Cell Junctions to
RT   Promote alpha-Toxin Cytotoxicity.";
RL   Cell Rep. 25:2132-2147(2018).
RN   [12]
RP   STRUCTURE BY NMR OF 246-487.
RG   RIKEN structural genomics initiative (RSGI);
RT   "Solution structure of the FHA domain and RAS-binding domain in mouse AF-6
RT   protein.";
RL   Submitted (JUL-2005) to the PDB data bank.
CC   -!- FUNCTION: Belongs to an adhesion system, probably together with the E-
CC       cadherin-catenin system, which plays a role in the organization of
CC       homotypic, interneuronal and heterotypic cell-cell adherens junctions
CC       (AJs) (By similarity). Nectin- and actin-filament-binding protein that
CC       connects nectin to the actin cytoskeleton (By similarity). May play a
CC       key role in the organization of epithelial structures of the embryonic
CC       ectoderm (PubMed:10477764). Essential for the organization of adherens
CC       junctions (By similarity). {ECO:0000250|UniProtKB:O35889,
CC       ECO:0000250|UniProtKB:P55196, ECO:0000269|PubMed:10477764}.
CC   -!- SUBUNIT: Homodimer. Interacts with F-actin, nectin and NECTIN3.
CC       Essential for the association of nectin and E-cadherin. Isoform 2/s-
CC       afadin does not interact with F-actin. Interacts with ZO-1 and
CC       occludin, but probably in an indirect manner. Interacts with RIT1,
CC       RIT2, NRXN1 and BCR (By similarity). Interacts with ADAM10; the
CC       interaction locks ADAM10 at adherens junctions following ADAM10
CC       recruitment to adherens junctions by TSPAN33 (PubMed:30463011).
CC       {ECO:0000250, ECO:0000269|PubMed:30463011}.
CC   -!- SUBCELLULAR LOCATION: Cell junction, adherens junction
CC       {ECO:0000269|PubMed:30463011}. Note=Not found at cell-matrix AJs.
CC       {ECO:0000250|UniProtKB:O35889}.
CC   -!- ALTERNATIVE PRODUCTS:
CC       Event=Alternative splicing; Named isoforms=3;
CC       Name=3;
CC         IsoId=Q9QZQ1-3; Sequence=Displayed;
CC       Name=1; Synonyms=l-afadin;
CC         IsoId=Q9QZQ1-2; Sequence=VSP_026731;
CC       Name=2; Synonyms=s-afadin;
CC         IsoId=Q9QZQ1-1; Sequence=Not described;
CC   -!- TISSUE SPECIFICITY: Isoform 1 is expressed only in a restricted set of
CC       epithelial structures during early embryogenesis.
CC       {ECO:0000269|PubMed:10477764}.
CC   -!- DEVELOPMENTAL STAGE: Highly expressed at restricted set of epithelial
CC       structures and highly concentrated at their junctional complex regions.
CC       At 6.5 dpc, localized at the most apical regions of cell-cell adhesion
CC       sites of the entire embryonic ectoderm; not detected in the
CC       extraembryonic regions. At 7.0 dpc, expressed in the primitive streak
CC       and the migrating paraxial mesoderm. At 7.5 dpc, highly expressed at
CC       the junctional complex regions in the primitive streak region
CC       (neuroepithelium) and the neural fold/grove region, but hardly detected
CC       in other areas of the ectoderm. By 8.5 dpc, highly expressed in the
CC       tail bud, somites and the paraxial mesoderm, concentrated at the
CC       junctional complex regions in neural tube, somites and
CC       pericardioperitoneal canal. {ECO:0000269|PubMed:10477764}.
CC   -!- DISRUPTION PHENOTYPE: Mice show developmental defects at stages during
CC       and after gastrulation, including disorganization of the ectoderm,
CC       impaired migration of the mesoderm and loss of somites and other
CC       structures derived from both the ectoderm and mesoderm. Cell-cell
CC       adherens juntions and tight junctions are improperly organized in the
CC       ectoderm-derived cells. No redundancy exists in the function of afadin
CC       during gastrulation. {ECO:0000269|PubMed:10477764}.
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DR   EMBL; AC155253; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; CAAA01106165; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; CAAA01134612; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; CAAA01201738; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; CAAA01218165; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; AF172447; AAD54283.1; -; mRNA.
DR   EMBL; AK016557; -; NOT_ANNOTATED_CDS; mRNA.
DR   CCDS; CCDS49955.1; -. [Q9QZQ1-3]
DR   RefSeq; NP_034936.1; NM_010806.1. [Q9QZQ1-3]
DR   PDB; 1WLN; NMR; -; A=381-502.
DR   PDB; 1WXA; NMR; -; A=246-348.
DR   PDB; 3AXA; X-ray; 2.78 A; A/B=1003-1095.
DR   PDB; 6AMB; X-ray; 2.50 A; B=38-136.
DR   PDBsum; 1WLN; -.
DR   PDBsum; 1WXA; -.
DR   PDBsum; 3AXA; -.
DR   PDBsum; 6AMB; -.
DR   AlphaFoldDB; Q9QZQ1; -.
DR   BMRB; Q9QZQ1; -.
DR   SMR; Q9QZQ1; -.
DR   BioGRID; 201438; 19.
DR   DIP; DIP-60737N; -.
DR   IntAct; Q9QZQ1; 6.
DR   MINT; Q9QZQ1; -.
DR   STRING; 10090.ENSMUSP00000118318; -.
DR   iPTMnet; Q9QZQ1; -.
DR   PhosphoSitePlus; Q9QZQ1; -.
DR   SwissPalm; Q9QZQ1; -.
DR   EPD; Q9QZQ1; -.
DR   jPOST; Q9QZQ1; -.
DR   MaxQB; Q9QZQ1; -.
DR   PaxDb; Q9QZQ1; -.
DR   PeptideAtlas; Q9QZQ1; -.
DR   PRIDE; Q9QZQ1; -.
DR   ProteomicsDB; 281948; -. [Q9QZQ1-3]
DR   ProteomicsDB; 281949; -. [Q9QZQ1-2]
DR   Antibodypedia; 4608; 279 antibodies from 32 providers.
DR   DNASU; 17356; -.
DR   Ensembl; ENSMUST00000139666; ENSMUSP00000118318; ENSMUSG00000068036. [Q9QZQ1-3]
DR   Ensembl; ENSMUST00000150848; ENSMUSP00000122447; ENSMUSG00000068036. [Q9QZQ1-2]
DR   GeneID; 17356; -.
DR   KEGG; mmu:17356; -.
DR   UCSC; uc008amr.1; mouse. [Q9QZQ1-3]
DR   CTD; 4301; -.
DR   MGI; MGI:1314653; Afdn.
DR   VEuPathDB; HostDB:ENSMUSG00000068036; -.
DR   eggNOG; KOG1892; Eukaryota.
DR   GeneTree; ENSGT00940000155237; -.
DR   InParanoid; Q9QZQ1; -.
DR   OMA; YRCAQDE; -.
DR   OrthoDB; 23029at2759; -.
DR   PhylomeDB; Q9QZQ1; -.
DR   TreeFam; TF350731; -.
DR   Reactome; R-MMU-418990; Adherens junctions interactions.
DR   BioGRID-ORCS; 17356; 2 hits in 43 CRISPR screens.
DR   ChiTaRS; Mllt4; mouse.
DR   EvolutionaryTrace; Q9QZQ1; -.
DR   PRO; PR:Q9QZQ1; -.
DR   Proteomes; UP000000589; Chromosome 17.
DR   RNAct; Q9QZQ1; protein.
DR   Bgee; ENSMUSG00000068036; Expressed in tail skin and 239 other tissues.
DR   ExpressionAtlas; Q9QZQ1; baseline and differential.
DR   Genevisible; Q9QZQ1; MM.
DR   GO; GO:0005912; C:adherens junction; IDA:MGI.
DR   GO; GO:0043296; C:apical junction complex; IDA:MGI.
DR   GO; GO:0045177; C:apical part of cell; IDA:MGI.
DR   GO; GO:0030424; C:axon; ISO:MGI.
DR   GO; GO:0030054; C:cell junction; IDA:MGI.
DR   GO; GO:0044291; C:cell-cell contact zone; ISO:MGI.
DR   GO; GO:0005911; C:cell-cell junction; IDA:ARUK-UCL.
DR   GO; GO:0005737; C:cytoplasm; IDA:MGI.
DR   GO; GO:0005829; C:cytosol; ISO:MGI.
DR   GO; GO:0060076; C:excitatory synapse; ISO:MGI.
DR   GO; GO:0016607; C:nuclear speck; ISO:MGI.
DR   GO; GO:0005654; C:nucleoplasm; ISO:MGI.
DR   GO; GO:0005886; C:plasma membrane; ISO:MGI.
DR   GO; GO:0046930; C:pore complex; IMP:UniProtKB.
DR   GO; GO:0036477; C:somatodendritic compartment; ISO:MGI.
DR   GO; GO:0070160; C:tight junction; ISO:MGI.
DR   GO; GO:0051015; F:actin filament binding; ISO:MGI.
DR   GO; GO:0050839; F:cell adhesion molecule binding; IPI:BHF-UCL.
DR   GO; GO:0030274; F:LIM domain binding; ISO:MGI.
DR   GO; GO:0031267; F:small GTPase binding; ISO:MGI.
DR   GO; GO:0034334; P:adherens junction maintenance; IMP:MGI.
DR   GO; GO:0070830; P:bicellular tight junction assembly; ISO:MGI.
DR   GO; GO:0048854; P:brain morphogenesis; IGI:MGI.
DR   GO; GO:0044331; P:cell-cell adhesion mediated by cadherin; IMP:ARUK-UCL.
DR   GO; GO:0021987; P:cerebral cortex development; IMP:MGI.
DR   GO; GO:0140059; P:dendrite arborization; ISO:MGI.
DR   GO; GO:0090557; P:establishment of endothelial intestinal barrier; ISO:MGI.
DR   GO; GO:0061951; P:establishment of protein localization to plasma membrane; IMP:ARUK-UCL.
DR   GO; GO:0048872; P:homeostasis of number of cells; IGI:MGI.
DR   GO; GO:0030336; P:negative regulation of cell migration; ISO:MGI.
DR   GO; GO:0060563; P:neuroepithelial cell differentiation; IGI:MGI.
DR   GO; GO:0046931; P:pore complex assembly; IMP:UniProtKB.
DR   GO; GO:0022409; P:positive regulation of cell-cell adhesion; ISO:MGI.
DR   GO; GO:2000049; P:positive regulation of cell-cell adhesion mediated by cadherin; ISO:MGI.
DR   GO; GO:1903861; P:positive regulation of dendrite extension; ISO:MGI.
DR   GO; GO:0050775; P:positive regulation of dendrite morphogenesis; ISO:MGI.
DR   GO; GO:0061003; P:positive regulation of dendritic spine morphogenesis; ISO:MGI.
DR   GO; GO:0010628; P:positive regulation of gene expression; ISO:MGI.
DR   GO; GO:0043547; P:positive regulation of GTPase activity; ISO:MGI.
DR   GO; GO:0061885; P:positive regulation of mini excitatory postsynaptic potential; ISO:MGI.
DR   GO; GO:1902414; P:protein localization to cell junction; IMP:MGI.
DR   GO; GO:0060019; P:radial glial cell differentiation; IGI:MGI.
DR   GO; GO:0070445; P:regulation of oligodendrocyte progenitor proliferation; IGI:MGI.
DR   GO; GO:0032880; P:regulation of protein localization; IBA:GO_Central.
DR   GO; GO:0007165; P:signal transduction; IEA:InterPro.
DR   GO; GO:0021537; P:telencephalon development; IGI:MGI.
DR   CDD; cd00060; FHA; 1.
DR   CDD; cd15471; Myo5p-like_CBD_afadin; 1.
DR   Gene3D; 2.30.42.10; -; 1.
DR   InterPro; IPR037977; CBD_Afadin.
DR   InterPro; IPR002710; Dilute_dom.
DR   InterPro; IPR000253; FHA_dom.
DR   InterPro; IPR001478; PDZ.
DR   InterPro; IPR036034; PDZ_sf.
DR   InterPro; IPR000159; RA_dom.
DR   InterPro; IPR008984; SMAD_FHA_dom_sf.
DR   InterPro; IPR029071; Ubiquitin-like_domsf.
DR   Pfam; PF01843; DIL; 1.
DR   Pfam; PF00498; FHA; 1.
DR   Pfam; PF00595; PDZ; 1.
DR   Pfam; PF00788; RA; 2.
DR   SMART; SM01132; DIL; 1.
DR   SMART; SM00240; FHA; 1.
DR   SMART; SM00228; PDZ; 1.
DR   SMART; SM00314; RA; 2.
DR   SUPFAM; SSF49879; SSF49879; 1.
DR   SUPFAM; SSF50156; SSF50156; 1.
DR   SUPFAM; SSF54236; SSF54236; 2.
DR   PROSITE; PS51126; DILUTE; 1.
DR   PROSITE; PS50106; PDZ; 1.
DR   PROSITE; PS50200; RA; 2.
PE   1: Evidence at protein level;
KW   3D-structure; Acetylation; Alternative splicing; Cell adhesion;
KW   Cell junction; Coiled coil; Phosphoprotein; Reference proteome; Repeat.
FT   CHAIN           1..1820
FT                   /note="Afadin"
FT                   /id="PRO_0000215919"
FT   DOMAIN          39..133
FT                   /note="Ras-associating 1"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00166"
FT   DOMAIN          246..348
FT                   /note="Ras-associating 2"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00166"
FT   DOMAIN          426..492
FT                   /note="FHA"
FT   DOMAIN          653..908
FT                   /note="Dilute"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00503"
FT   DOMAIN          1007..1093
FT                   /note="PDZ"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00143"
FT   REGION          129..196
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          356..377
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          538..569
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          1107..1194
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          1203..1222
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          1235..1278
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          1308..1527
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          1567..1716
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          1734..1820
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COILED          146..186
FT                   /evidence="ECO:0000255"
FT   COILED          1410..1446
FT                   /evidence="ECO:0000255"
FT   COILED          1523..1561
FT                   /evidence="ECO:0000255"
FT   COILED          1593..1665
FT                   /evidence="ECO:0000255"
FT   COMPBIAS        143..196
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        545..568
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1130..1147
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1154..1169
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1171..1194
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1308..1340
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1360..1376
FT                   /note="Pro residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1406..1441
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1442..1490
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1512..1527
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1588..1684
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1685..1709
FT                   /note="Pro residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1802..1820
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   MOD_RES         216
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:17242355,
FT                   ECO:0007744|PubMed:21183079"
FT   MOD_RES         246
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:P55196"
FT   MOD_RES         256
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:P55196"
FT   MOD_RES         391
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:O35889"
FT   MOD_RES         424
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:P55196"
FT   MOD_RES         512
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:P55196"
FT   MOD_RES         557
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:19144319"
FT   MOD_RES         562
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:P55196"
FT   MOD_RES         655
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:P55196"
FT   MOD_RES         1083
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:21183079"
FT   MOD_RES         1107
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:19131326,
FT                   ECO:0007744|PubMed:21183079"
FT   MOD_RES         1126
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:21183079"
FT   MOD_RES         1140
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:O35889"
FT   MOD_RES         1143
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:21183079"
FT   MOD_RES         1172
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:21183079"
FT   MOD_RES         1173
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:P55196"
FT   MOD_RES         1182
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:19131326,
FT                   ECO:0007744|PubMed:21183079"
FT   MOD_RES         1199
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:P55196"
FT   MOD_RES         1232
FT                   /note="Phosphothreonine"
FT                   /evidence="ECO:0000250|UniProtKB:P55196"
FT   MOD_RES         1238
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:P55196"
FT   MOD_RES         1275
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:P55196"
FT   MOD_RES         1328
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:P55196"
FT   MOD_RES         1330
FT                   /note="Phosphothreonine"
FT                   /evidence="ECO:0000250|UniProtKB:P55196"
FT   MOD_RES         1499
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:P55196"
FT   MOD_RES         1510
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:21183079"
FT   MOD_RES         1694
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:P55196"
FT   MOD_RES         1719
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:21183079"
FT   MOD_RES         1770
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:21183079"
FT   MOD_RES         1795
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:21183079"
FT   MOD_RES         1803
FT                   /note="N6-acetyllysine"
FT                   /evidence="ECO:0007744|PubMed:23806337"
FT   VAR_SEQ         393..407
FT                   /note="Missing (in isoform 1)"
FT                   /evidence="ECO:0000303|PubMed:10477764"
FT                   /id="VSP_026731"
FT   CONFLICT        23
FT                   /note="N -> Y (in Ref. 2; AAD54283)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        101
FT                   /note="E -> EE (in Ref. 3; AK016557)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        694
FT                   /note="N -> D (in Ref. 3; AK016557)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        897..900
FT                   /note="DLIE -> PEMR (in Ref. 3; AK016557)"
FT                   /evidence="ECO:0000305"
FT   STRAND          40..46
FT                   /evidence="ECO:0007829|PDB:6AMB"
FT   STRAND          57..63
FT                   /evidence="ECO:0007829|PDB:6AMB"
FT   HELIX           68..79
FT                   /evidence="ECO:0007829|PDB:6AMB"
FT   STRAND          91..97
FT                   /evidence="ECO:0007829|PDB:6AMB"
FT   STRAND          100..103
FT                   /evidence="ECO:0007829|PDB:6AMB"
FT   HELIX           110..114
FT                   /evidence="ECO:0007829|PDB:6AMB"
FT   STRAND          125..130
FT                   /evidence="ECO:0007829|PDB:6AMB"
FT   STRAND          249..252
FT                   /evidence="ECO:0007829|PDB:1WXA"
FT   TURN            255..257
FT                   /evidence="ECO:0007829|PDB:1WXA"
FT   STRAND          259..261
FT                   /evidence="ECO:0007829|PDB:1WXA"
FT   STRAND          264..267
FT                   /evidence="ECO:0007829|PDB:1WXA"
FT   HELIX           274..285
FT                   /evidence="ECO:0007829|PDB:1WXA"
FT   STRAND          288..290
FT                   /evidence="ECO:0007829|PDB:1WXA"
FT   TURN            292..294
FT                   /evidence="ECO:0007829|PDB:1WXA"
FT   STRAND          295..301
FT                   /evidence="ECO:0007829|PDB:1WXA"
FT   STRAND          308..311
FT                   /evidence="ECO:0007829|PDB:1WXA"
FT   STRAND          315..317
FT                   /evidence="ECO:0007829|PDB:1WXA"
FT   HELIX           325..330
FT                   /evidence="ECO:0007829|PDB:1WXA"
FT   HELIX           334..336
FT                   /evidence="ECO:0007829|PDB:1WXA"
FT   STRAND          339..345
FT                   /evidence="ECO:0007829|PDB:1WXA"
FT   HELIX           381..383
FT                   /evidence="ECO:0007829|PDB:1WLN"
FT   STRAND          386..390
FT                   /evidence="ECO:0007829|PDB:1WLN"
FT   STRAND          418..420
FT                   /evidence="ECO:0007829|PDB:1WLN"
FT   STRAND          423..427
FT                   /evidence="ECO:0007829|PDB:1WLN"
FT   STRAND          429..431
FT                   /evidence="ECO:0007829|PDB:1WLN"
FT   STRAND          450..457
FT                   /evidence="ECO:0007829|PDB:1WLN"
FT   STRAND          459..464
FT                   /evidence="ECO:0007829|PDB:1WLN"
FT   STRAND          466..468
FT                   /evidence="ECO:0007829|PDB:1WLN"
FT   STRAND          470..474
FT                   /evidence="ECO:0007829|PDB:1WLN"
FT   STRAND          481..483
FT                   /evidence="ECO:0007829|PDB:1WLN"
FT   STRAND          488..491
FT                   /evidence="ECO:0007829|PDB:1WLN"
FT   TURN            492..494
FT                   /evidence="ECO:0007829|PDB:1WLN"
FT   STRAND          495..500
FT                   /evidence="ECO:0007829|PDB:1WLN"
FT   STRAND          1007..1013
FT                   /evidence="ECO:0007829|PDB:3AXA"
FT   STRAND          1015..1017
FT                   /evidence="ECO:0007829|PDB:3AXA"
FT   STRAND          1019..1026
FT                   /evidence="ECO:0007829|PDB:3AXA"
FT   STRAND          1031..1041
FT                   /evidence="ECO:0007829|PDB:3AXA"
FT   HELIX           1045..1049
FT                   /evidence="ECO:0007829|PDB:3AXA"
FT   STRAND          1057..1061
FT                   /evidence="ECO:0007829|PDB:3AXA"
FT   HELIX           1071..1079
FT                   /evidence="ECO:0007829|PDB:3AXA"
FT   STRAND          1083..1090
FT                   /evidence="ECO:0007829|PDB:3AXA"
SQ   SEQUENCE   1820 AA;  206499 MW;  9FA4F378D840D8B1 CRC64;
     MSAGGRDEER RKLADIIHHW NANRLDLFEI SQPTEDLEFH GVMRFYFQDK AAGNFATKCI
     RVSSTATTQD VIETLAEKFR PDMRMLSSPK YSLYEVHVSG ERRLDIDEKP LVVQLNWNKD
     DREGRFVLKN ENDAIPAKKA QSNGPEKQEK EGVIQNFKRT LSKKEKKEKK KKEKEALRQA
     SDKEERPSQG DDSENSRLAA EVYKDMPETS FTRTISNPEV VMKRRRQQKL EKRMQEFRSS
     DGRPDSGGTL RIYADSLKPN IPYKTILLST TDTADFAVAE SLEKYGLEKE NPKDYCIARV
     MLPPGAQHSD ERGAKEIILD DDECPLQIFR EWPSDKGILV FQLKRRPPDY IPKKMKKHVE
     GKSLKGKDRA DGSGYGSALP PEKLPYLVEL SPGRRNHFAY YSYHTYEDGS DSRDKPKLYR
     LQLSVTEVGT EKFDDNSIQL FGPGIQPHHC DLTNMDGVVT VTPRSMDAET YVDGQRISET
     TMLQSGMRLQ FGTSHVFKFV DPIQDHVLSK RSVDGGLMVK GPRHKPGAVQ ETTFELGGDV
     HSGTALPASR STTRLDSDRV SSASSTAERG MVKPMIRLDQ EQEYRRRENR TQDATGPELI
     LPASIEFRES SEDSFLSAII NYTNSSTVHF KLSPTYVLYM ACRYVLSSQH RPDISPTERT
     HKAIAVVNKM VSMMEGVIQK QKNIAGALAF WMANASELLN FIKQDRDLSR ITLDAQDVLA
     HLVQMAFKYL VHCLQSELNN YMPAFLDDPE ENSLQRPKID DVLHTLTGAM SLLRRCRVNA
     ALTIQLFSQL FHFINMWLFN RLVTDPDSGL CSHYWGAIIR QQLGHIEAWA EKQGLELAAD
     CHLSRIVQAT TLLTMDKYVP DDIPNINSTC FKLNSLQLQA LLQNYHCAPD EPFIPTDLIE
     NVVAVAENTA DELARSDGRD VQLEEDPDLQ LPFLLPEDGY SCDVVRNIPN GLQEFLDPLC
     QRGFCRLVPH TRSPGTWTIY FEGADYESHL MRENAELAQP LRKEPEIITV TLKKQNGMGL
     SIVAAKGAGQ DKLGIYVKSV VKGGAADVDG RLAAGDQLLS VDGRSLVGLS QERAAELMTR
     TSSVVTLEVA KQGAIYHGLA TLLNQPSPMM QRISDRRGSG KPRPKSEGFE LYNNSAQNGS
     PESPQMPWTE YSEPKKLPGD DRLMKNRADH RSSPNVANQP PSPGGKGPYT SGTAAKITSV
     STGNLCTEEQ SPPPRPEAYP IPTQTYTREY FTFPASKSQD RMAPPQSQWP NYEEKPHVHT
     ESNHSSIAIQ RVTRSQEELR EEKVYQLERH RVEAGMDRKC DSDMWINQSS SVESSTSSQE
     HLNHSSKSVT PASTLTKSGP GRWKTPAAVL PTPVAVSQPI RTDLPPPPPP PPVHYTSEFD
     GIPMDLPLPP PPANQAGPQS AQVAAAEWKK REEHQRWYEK EKARLEEERE RKRREQERKL
     GQMRSQTLNP ASFSPLATQA KPEKPSTLQR PQETVIRELQ PQQQPRTIER KDLQYITISK
     EELSSGDSLS PDPWKRDARE KLEKQQQMHI VDMLSKEIHE LQNKVDRTAE ESDRLRKLML
     EWQFQKRLQE SKQKDEDDDE EEDDDVDTML IMQRLEAERR ARMQDEERRR QQQLEEMRKR
     EAEDRVRQEE DGRHQEEERV KRDAEEKRRQ EEGYYSRLEA ERRRQHEEAA RRLLEPEEPG
     LSRPPLPRDY EPPSLSSAPC APPPPPQRNA SYLKTQVLSP DSLFTAKFVA YDEEEEDYGP
     AGPNSYSGSA GTAVGAYDAP REAREKLTRS QDADLPGSSG APENLTFKER QRLFSQGQDV
     SDKVKASRKL TELENELNTK
 
 
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