EGR4_BOVIN
ID EGR4_BOVIN Reviewed; 482 AA.
AC Q9GL32; Q9GL31;
DT 06-FEB-2007, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2001, sequence version 1.
DT 03-AUG-2022, entry version 109.
DE RecName: Full=Early growth response protein 4;
DE Short=EGR-4;
GN Name=EGR4;
OS Bos taurus (Bovine).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae;
OC Bovinae; Bos.
OX NCBI_TaxID=9913;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA], NUCLEOTIDE SEQUENCE [MRNA] OF 1-440,
RP VARIANT PHE-322, ALTERNATIVE SPLICING, AND TISSUE SPECIFICITY.
RX PubMed=12648095; DOI=10.1046/j.1365-2052.2003.00969.x;
RA Nissen P.H., Thomsen B., Offenberg H., Thomsen P.D., Bendixen C.;
RT "Cloning and genomic structure of the bovine EGR4 gene and evaluation as
RT candidate gene for bovine spinal dysmyelination.";
RL Anim. Genet. 34:124-131(2003).
CC -!- FUNCTION: Transcriptional regulator. Recognizes and binds to the DNA
CC sequence 5'-GCGGGGGCG-3' (GSG). Activates the transcription of target
CC genes whose products are required for mitogenesis and differentiation
CC (By similarity). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000305}.
CC -!- ALTERNATIVE PRODUCTS:
CC Event=Alternative splicing; Named isoforms=2;
CC Name=1;
CC IsoId=Q9GL32-1; Sequence=Displayed;
CC Name=2;
CC IsoId=Q9GL32-2; Sequence=VSP_022677;
CC -!- TISSUE SPECIFICITY: Expressed in brain. In the cerebellum and frontal
CC cortex. {ECO:0000269|PubMed:12648095}.
CC -!- SIMILARITY: Belongs to the EGR C2H2-type zinc-finger protein family.
CC {ECO:0000305}.
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DR EMBL; AJ293899; CAC07207.1; -; Genomic_DNA.
DR EMBL; AJ293900; CAC07208.2; -; mRNA.
DR RefSeq; NP_001035587.1; NM_001040497.1. [Q9GL32-1]
DR AlphaFoldDB; Q9GL32; -.
DR SMR; Q9GL32; -.
DR STRING; 9913.ENSBTAP00000033084; -.
DR PaxDb; Q9GL32; -.
DR PRIDE; Q9GL32; -.
DR GeneID; 407155; -.
DR KEGG; bta:407155; -.
DR CTD; 1961; -.
DR eggNOG; KOG1721; Eukaryota.
DR InParanoid; Q9GL32; -.
DR OrthoDB; 1318335at2759; -.
DR Proteomes; UP000009136; Unplaced.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0000981; F:DNA-binding transcription factor activity, RNA polymerase II-specific; IBA:GO_Central.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0000978; F:RNA polymerase II cis-regulatory region sequence-specific DNA binding; IBA:GO_Central.
DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IBA:GO_Central.
DR InterPro; IPR036236; Znf_C2H2_sf.
DR InterPro; IPR013087; Znf_C2H2_type.
DR Pfam; PF00096; zf-C2H2; 3.
DR SMART; SM00355; ZnF_C2H2; 3.
DR SUPFAM; SSF57667; SSF57667; 2.
DR PROSITE; PS00028; ZINC_FINGER_C2H2_1; 3.
DR PROSITE; PS50157; ZINC_FINGER_C2H2_2; 3.
PE 2: Evidence at transcript level;
KW Alternative splicing; DNA-binding; Metal-binding; Nucleus;
KW Reference proteome; Repeat; Transcription; Transcription regulation; Zinc;
KW Zinc-finger.
FT CHAIN 1..482
FT /note="Early growth response protein 4"
FT /id="PRO_0000274191"
FT ZN_FING 376..400
FT /note="C2H2-type 1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00042"
FT ZN_FING 406..428
FT /note="C2H2-type 2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00042"
FT ZN_FING 434..456
FT /note="C2H2-type 3"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00042"
FT REGION 274..357
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 335..350
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT VAR_SEQ 45
FT /note="A -> AA (in isoform 2)"
FT /evidence="ECO:0000305"
FT /id="VSP_022677"
FT VARIANT 322
FT /note="L -> F"
FT /evidence="ECO:0000269|PubMed:12648095"
SQ SEQUENCE 482 AA; 50304 MW; 51E4DB72410E4D61 CRC64;
MLHLSEFSGP DALLVKSTEG CCSEPSTDLT RLPARDPPAA TGYPAGDFLS WALSSCGAGE
YLTDSCLLEG PAPTPPPGLG YSGSFFIQAV PEHPHDPEAL FNLMSGILGL TPFPGAEAAA
SRSPLDASFP AGSDALLPGP PDLFSPDPGA AAFPEAFWEA SPSAGAPSQC LYEPHLSAPD
VKPGLRAPPA SPALDTASAF KGPYSPWELL SAGAPGSCGS QGGYQAAPEA RFPTTGAKIE
DLLSISCPAE LPGGPASRLY TMGTYDAFPL APGDLGEGAE SLPGLLTPPS GEGGSSGEGG
EFLDGTQPEL SPLGLRSATA DLPKPLVADI PGSSAVPEPP VPPPAPFPPA KARRKGRRGG
KCSARCFCPR PHAKAFACPV ESCVRSFARS DELNRHLRIH TGHKPFQCRI CLRNFSRSDH
LTTHVRTHTG EKPFACDVCG RRFARSDEKK RHSKVHLKQK ARAEERLKGL GFYSLGLSFA
AL