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EHD2_ORYSI
ID   EHD2_ORYSI              Reviewed;         476 AA.
AC   B8BGV5;
DT   05-JUN-2019, integrated into UniProtKB/Swiss-Prot.
DT   03-MAR-2009, sequence version 1.
DT   03-AUG-2022, entry version 57.
DE   RecName: Full=Protein EARLY HEADING DATE 2 {ECO:0000305};
DE   AltName: Full=Protein RICE INDETERMINATE 1 {ECO:0000305};
GN   Name=Ehd2 {ECO:0000305}; Synonyms=RID1 {ECO:0000305};
GN   ORFNames=OsI_33602 {ECO:0000312|EMBL:EEC66957.1};
OS   Oryza sativa subsp. indica (Rice).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX   NCBI_TaxID=39946;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. 93-11;
RX   PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA   Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA   Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA   Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA   Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA   Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA   Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA   Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA   Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA   Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA   Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA   Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA   Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA   Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA   McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT   "The genomes of Oryza sativa: a history of duplications.";
RL   PLoS Biol. 3:266-281(2005).
CC   -!- FUNCTION: Transcription activator that acts as a flowering master
CC       switch in both long and short days, independently of the circadian
CC       clock (By similarity). Promotes flowering upstream of HD1 by up-
CC       regulating FTL1, FTL4, FTL5, FTL6, EHD1, HD3A and RFT1 (By similarity).
CC       Seems to repress FTL11 expression (By similarity). May recognize the
CC       consensus motif 5'-TTTGTCGTAAT-3' in target gene promoters (By
CC       similarity). {ECO:0000250|UniProtKB:B1B534}.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00768}.
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DR   EMBL; CM000135; EEC66957.1; -; Genomic_DNA.
DR   AlphaFoldDB; B8BGV5; -.
DR   STRING; 39946.B8BGV5; -.
DR   EnsemblPlants; BGIOSGA031911-TA; BGIOSGA031911-PA; BGIOSGA031911.
DR   Gramene; BGIOSGA031911-TA; BGIOSGA031911-PA; BGIOSGA031911.
DR   HOGENOM; CLU_014578_4_2_1; -.
DR   OMA; ATTVACC; -.
DR   Proteomes; UP000007015; Chromosome 10.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   GO; GO:0043565; F:sequence-specific DNA binding; IEA:EnsemblPlants.
DR   GO; GO:0048574; P:long-day photoperiodism, flowering; IEA:EnsemblPlants.
DR   GO; GO:0045893; P:positive regulation of transcription, DNA-templated; IEA:EnsemblPlants.
DR   GO; GO:0048510; P:regulation of timing of transition from vegetative to reproductive phase; IEA:EnsemblPlants.
DR   GO; GO:0048575; P:short-day photoperiodism, flowering; IEA:EnsemblPlants.
DR   InterPro; IPR036236; Znf_C2H2_sf.
DR   InterPro; IPR013087; Znf_C2H2_type.
DR   SMART; SM00355; ZnF_C2H2; 3.
DR   SUPFAM; SSF57667; SSF57667; 1.
DR   PROSITE; PS00028; ZINC_FINGER_C2H2_1; 1.
DR   PROSITE; PS50157; ZINC_FINGER_C2H2_2; 1.
PE   3: Inferred from homology;
KW   Activator; Metal-binding; Nucleus; Reference proteome; Repeat;
KW   Transcription; Transcription regulation; Zinc; Zinc-finger.
FT   CHAIN           1..476
FT                   /note="Protein EARLY HEADING DATE 2"
FT                   /id="PRO_0000447326"
FT   ZN_FING         106..128
FT                   /note="C2H2-type 1"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00042"
FT   ZN_FING         156..186
FT                   /note="C2H2-type 2"
FT                   /evidence="ECO:0000250|UniProtKB:Q700D2"
FT   ZN_FING         191..214
FT                   /note="C2H2-type 2; degenerate"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00042"
FT   ZN_FING         218..241
FT                   /note="CCHC-type 2; atypical"
FT                   /evidence="ECO:0000250|UniProtKB:Q700D2"
FT   REGION          1..27
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          228..240
FT                   /note="SHR-binding"
FT                   /evidence="ECO:0000250|UniProtKB:Q700D2"
FT   MOTIF           124..131
FT                   /note="Nuclear localization signal 1"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00768"
FT   MOTIF           178..185
FT                   /note="Nuclear localization signal 2"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00768"
FT   COMPBIAS        1..17
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   BINDING         193
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /ligand_label="1"
FT                   /evidence="ECO:0000250|UniProtKB:Q700D2"
FT   BINDING         196
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /ligand_label="1"
FT                   /evidence="ECO:0000250|UniProtKB:Q700D2"
FT   BINDING         209
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /ligand_label="1"
FT                   /evidence="ECO:0000250|UniProtKB:Q700D2"
FT   BINDING         213
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /ligand_label="1"
FT                   /evidence="ECO:0000250|UniProtKB:Q700D2"
FT   BINDING         220
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /ligand_label="2"
FT                   /evidence="ECO:0000250|UniProtKB:Q700D2"
FT   BINDING         222
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /ligand_label="2"
FT                   /evidence="ECO:0000250|UniProtKB:Q700D2"
FT   BINDING         235
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /ligand_label="2"
FT                   /evidence="ECO:0000250|UniProtKB:Q700D2"
FT   BINDING         239
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /ligand_label="2"
FT                   /evidence="ECO:0000250|UniProtKB:Q700D2"
SQ   SEQUENCE   476 AA;  50787 MW;  290EC6610636043B CRC64;
     MLLSDLSSDQ EATGSNSHGG GGGGDRMVVG SHGAAHVVLS NLFLPPAAAA AATMLLPAAP
     VMVRPAAMAA AQEPRAKKKR SLPGNPDPEA EVIALSPRAL VATNRFVCEV CNKGFQRDQN
     LQLHRRGHNL PWKLRHRAAA VSAVTTAAPA PRKRVYVCPE PTCVHHDPAR ALGDLTGIKK
     HFSRKHGEKR WRCERCGKRY AVHSDWKAHV KNCGTREYRC DCGILFSRKD SLLTHRAFCD
     ALAEESARLL AAANNSSSIT TTTCNNSNIS SNNNNNNINS ISNSNNLLIT SSSSSPPLFL
     PFSTTPAENP NPNQLLFLQQ HQAAHHQLLL PQFQQPPSSP PAYFDHLAFG GGGGVITSSS
     CNDDNSSIAG DVMVAAGGDS VSFGLTSEGS VTMHAGDVGR RRLTRDFLGV DHDAGEVDEL
     ELDELPADLS TTAAACQGCN FAAATTVACC ATDFTTGSRQ YLGRLPPVNE TWSHNF
 
 
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