AFSR_STRCO
ID AFSR_STRCO Reviewed; 993 AA.
AC P25941; P08467; Q9L000;
DT 01-AUG-1988, integrated into UniProtKB/Swiss-Prot.
DT 18-OCT-2001, sequence version 2.
DT 03-AUG-2022, entry version 155.
DE RecName: Full=Regulatory protein AfsR;
GN Name=afsR; Synonyms=afsB; OrderedLocusNames=SCO4426; ORFNames=SCD6.04c;
OS Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145).
OC Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae;
OC Streptomyces; Streptomyces albidoflavus group.
OX NCBI_TaxID=100226;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=A3(2) / NRRL B-16638;
RX PubMed=2253887; DOI=10.1016/0378-1119(90)90412-k;
RA Horinouchi S., Kito M., Nishiyama M., Furuya K., Hong S.-K., Miyake K.,
RA Beppu T.;
RT "Primary structure of AfsR, a global regulatory protein for secondary
RT metabolite formation in Streptomyces coelicolor A3(2).";
RL Gene 95:49-56(1990).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-471 / A3(2) / M145;
RX PubMed=12000953; DOI=10.1038/417141a;
RA Bentley S.D., Chater K.F., Cerdeno-Tarraga A.-M., Challis G.L.,
RA Thomson N.R., James K.D., Harris D.E., Quail M.A., Kieser H., Harper D.,
RA Bateman A., Brown S., Chandra G., Chen C.W., Collins M., Cronin A.,
RA Fraser A., Goble A., Hidalgo J., Hornsby T., Howarth S., Huang C.-H.,
RA Kieser T., Larke L., Murphy L.D., Oliver K., O'Neil S., Rabbinowitsch E.,
RA Rajandream M.A., Rutherford K.M., Rutter S., Seeger K., Saunders D.,
RA Sharp S., Squares R., Squares S., Taylor K., Warren T., Wietzorrek A.,
RA Woodward J.R., Barrell B.G., Parkhill J., Hopwood D.A.;
RT "Complete genome sequence of the model actinomycete Streptomyces coelicolor
RT A3(2).";
RL Nature 417:141-147(2002).
RN [3]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 751-993.
RC STRAIN=A3(2) / NRRL B-16638;
RX PubMed=2428809; DOI=10.1128/jb.168.1.257-269.1986;
RA Horinouchi S., Suzuki H., Beppu T.;
RT "Nucleotide sequence of afsB, a pleiotropic gene involved in secondary
RT metabolism in Streptomyces coelicolor A3(2) and 'Streptomyces lividans'.";
RL J. Bacteriol. 168:257-269(1986).
CC -!- FUNCTION: Global regulatory protein for secondary metabolite formation.
CC -!- DOMAIN: The N-terminal and the C-terminal regions are independently
CC capable of directing actinorhodin production.
CC -!- PTM: Phosphorylated by AfsK.
CC -!- SIMILARITY: Belongs to the AfsR/DnrI/RedD regulatory family.
CC {ECO:0000305}.
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DR EMBL; D90155; BAA14186.1; -; Genomic_DNA.
DR EMBL; AL939120; CAB88433.1; -; Genomic_DNA.
DR EMBL; M16011; AAA26694.1; -; Genomic_DNA.
DR PIR; A25037; A25037.
DR PIR; JQ0488; JQ0488.
DR RefSeq; NP_628593.1; NC_003888.3.
DR RefSeq; WP_011029645.1; NZ_VNID01000017.1.
DR AlphaFoldDB; P25941; -.
DR SMR; P25941; -.
DR STRING; 100226.SCO4426; -.
DR GeneID; 1099866; -.
DR KEGG; sco:SCO4426; -.
DR PATRIC; fig|100226.15.peg.4495; -.
DR eggNOG; COG3629; Bacteria.
DR eggNOG; COG3903; Bacteria.
DR HOGENOM; CLU_004665_2_0_11; -.
DR InParanoid; P25941; -.
DR OMA; GCIGGDR; -.
DR PhylomeDB; P25941; -.
DR Proteomes; UP000001973; Chromosome.
DR GO; GO:0043531; F:ADP binding; IEA:InterPro.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0031409; F:pigment binding; IEA:UniProtKB-KW.
DR GO; GO:0017000; P:antibiotic biosynthetic process; IEA:UniProtKB-KW.
DR GO; GO:0000160; P:phosphorelay signal transduction system; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of transcription, DNA-templated; IEA:InterPro.
DR CDD; cd15831; BTAD; 1.
DR Gene3D; 1.10.10.10; -; 1.
DR Gene3D; 1.25.40.10; -; 2.
DR InterPro; IPR005158; BTAD.
DR InterPro; IPR002182; NB-ARC.
DR InterPro; IPR001867; OmpR/PhoB-type_DNA-bd.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR016032; Sig_transdc_resp-reg_C-effctor.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR InterPro; IPR019734; TPR_repeat.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR Pfam; PF03704; BTAD; 1.
DR Pfam; PF00931; NB-ARC; 1.
DR Pfam; PF00486; Trans_reg_C; 1.
DR SMART; SM01043; BTAD; 1.
DR SMART; SM00028; TPR; 4.
DR SMART; SM00862; Trans_reg_C; 1.
DR SUPFAM; SSF46894; SSF46894; 1.
DR SUPFAM; SSF48452; SSF48452; 2.
DR SUPFAM; SSF52540; SSF52540; 1.
DR PROSITE; PS51755; OMPR_PHOB; 1.
DR PROSITE; PS50005; TPR; 3.
DR PROSITE; PS50293; TPR_REGION; 1.
PE 3: Inferred from homology;
KW Activator; Antibiotic biosynthesis; ATP-binding; DNA-binding;
KW Nucleotide-binding; Phosphoprotein; Pigment; Reference proteome; Repeat;
KW TPR repeat; Transcription; Transcription regulation;
KW Two-component regulatory system.
FT CHAIN 1..993
FT /note="Regulatory protein AfsR"
FT /id="PRO_0000110004"
FT DOMAIN 280..579
FT /note="NB-ARC"
FT REPEAT 823..856
FT /note="TPR 1"
FT REPEAT 863..896
FT /note="TPR 2"
FT REPEAT 942..975
FT /note="TPR 3"
FT DNA_BIND 17..113
FT /note="OmpR/PhoB-type"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01091"
FT DNA_BIND 796..811
FT /note="H-T-H motif"
FT /evidence="ECO:0000255"
FT DNA_BIND 974..988
FT /note="H-T-H motif"
FT /evidence="ECO:0000255"
FT REGION 1..21
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT BINDING 330..337
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000255"
FT CONFLICT 256
FT /note="Q -> R (in Ref. 1; BAA14186)"
FT /evidence="ECO:0000305"
FT CONFLICT 318
FT /note="A -> P (in Ref. 1; BAA14186)"
FT /evidence="ECO:0000305"
FT CONFLICT 751..766
FT /note="DVLLVSGRIEHAEEEA -> MCSWCPVASSMPRKRH (in Ref. 3)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 993 AA; 105716 MW; 8793CF27CEA7254C CRC64;
MDGGPRVPEQ RRPGFPAEEE ESGALRFGVL GPVRAWRDGE TLATGSPQQR ALLAALLLRE
GRTATAGELI DALWGEEPPS QALAAVRTYA SRLRKVLDPG VLVSESGGYA VRGLAEGALD
LARAQDLASA AEKARSAGDL CHARDLLRRA LDLWDGEVLA GVPGPYAQTQ RVRLGEWRLQ
LLETRLDMDL DQGCHAEAVS ELTALTAAHP LRERLRELLM LALYRSGRQA EALAVYADTR
RLLADELGVD PRPGLQELQQ RILQADPALA ELSAATAETA TATLRPAQLP ATVSDFTGRA
AFVRELSDVL SAASGESASG RVMAVSALAG IGGVGKTTLA VHVAHRARAA FPDGQLYVDL
QGAGARPAEP ETVLGSFLRA LGTADSAIPD SLEERAALYR SVLDGRRVLV LLDNARDAAQ
VRPLLPGTDG CAALVTARVR MVDLAGAHLV DLDVMAPEEA LALFTKIVGE ERVASERQAA
LDVVGACGFL PLAIRIAASR LAARRTWTVS VLAAKLADER RRLDELQAGD QAVEATFELG
YGQLEPAQAR AFRLLGLADG PDISLAAAAA VLDLPAQDTE DLLESLVDTS LLESAAPGRY
RFHDLVRLYA RACAERTERD GNAPSERGAA LSRLLDFYLA TAAGVYAIER PGDRLVDGLE
PTEYPGLTFT EGSAALDWLY TEAAPLLACV RQSAGTARLR RAVDLLWAAK DLTESGANSH
QYEATARAMC DATGSAADTR AEGRARTVLS DVLLVSGRIE HAEEEARLAM RLAGSAEDSA
AVSWVANNRG LVCLHQRRYA EGKGLFHQAI AGFRATDNRA GEASALSNLS RAQLGMGNVA
EAVDIARQGL AVYAELGRTM RLANGHFALG VALTRAGRHE EALGEFAEAL DLFGDHRQRL
WEGATNFRLA EVHLAAGRPS SAAQHAEQAL ALGCIGGDRM RGNVLALLGR ALSALGQADR
ARACWREALS LYEQHDAQEV GEVRALLARS VAR