EIF1A_CAEBR
ID EIF1A_CAEBR Reviewed; 176 AA.
AC P0C659; A8X8U8;
DT 05-FEB-2008, integrated into UniProtKB/Swiss-Prot.
DT 05-FEB-2008, sequence version 1.
DT 03-AUG-2022, entry version 60.
DE RecName: Full=Probable RNA-binding protein EIF1AD;
DE AltName: Full=Eukaryotic translation initiation factor 1A domain-containing protein;
GN ORFNames=CBG09545;
OS Caenorhabditis briggsae.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC Caenorhabditis.
OX NCBI_TaxID=6238;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AF16;
RX PubMed=14624247; DOI=10.1371/journal.pbio.0000045;
RA Stein L.D., Bao Z., Blasiar D., Blumenthal T., Brent M.R., Chen N.,
RA Chinwalla A., Clarke L., Clee C., Coghlan A., Coulson A., D'Eustachio P.,
RA Fitch D.H.A., Fulton L.A., Fulton R.E., Griffiths-Jones S., Harris T.W.,
RA Hillier L.W., Kamath R., Kuwabara P.E., Mardis E.R., Marra M.A.,
RA Miner T.L., Minx P., Mullikin J.C., Plumb R.W., Rogers J., Schein J.E.,
RA Sohrmann M., Spieth J., Stajich J.E., Wei C., Willey D., Wilson R.K.,
RA Durbin R.M., Waterston R.H.;
RT "The genome sequence of Caenorhabditis briggsae: a platform for comparative
RT genomics.";
RL PLoS Biol. 1:166-192(2003).
CC -!- SIMILARITY: Belongs to the EIF1AD family. {ECO:0000305}.
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DR EMBL; HE600998; CAP29059.1; -; Genomic_DNA.
DR RefSeq; XP_002637050.1; XM_002637004.1.
DR AlphaFoldDB; P0C659; -.
DR SMR; P0C659; -.
DR STRING; 6238.CBG09545; -.
DR EnsemblMetazoa; CBG09545.1; CBG09545.1; WBGene00031109.
DR GeneID; 8579046; -.
DR KEGG; cbr:CBG_09545; -.
DR CTD; 8579046; -.
DR WormBase; CBG09545; CBP02312; WBGene00031109; -.
DR eggNOG; KOG2925; Eukaryota.
DR HOGENOM; CLU_106477_1_0_1; -.
DR InParanoid; P0C659; -.
DR OMA; YLVSMPR; -.
DR OrthoDB; 1438454at2759; -.
DR Proteomes; UP000008549; Chromosome V.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003743; F:translation initiation factor activity; IEA:InterPro.
DR Gene3D; 2.40.50.140; -; 1.
DR InterPro; IPR039294; EIF1AD.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR006196; RNA-binding_domain_S1_IF1.
DR InterPro; IPR001253; TIF_eIF-1A.
DR PANTHER; PTHR21641; PTHR21641; 1.
DR Pfam; PF01176; eIF-1a; 1.
DR SMART; SM00652; eIF1a; 1.
DR SUPFAM; SSF50249; SSF50249; 1.
PE 3: Inferred from homology;
KW Reference proteome; RNA-binding.
FT CHAIN 1..176
FT /note="Probable RNA-binding protein EIF1AD"
FT /id="PRO_0000314160"
FT DOMAIN 5..89
FT /note="S1-like"
FT REGION 117..176
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 117..132
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 133..163
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 176 AA; 20525 MW; 96E3B20567274DD4 CRC64;
MSAATKKRYI TNKVGSEFYE LAEEDIIAQV RQSRGNNLHE VLDQNGDSYV VSMPTKFRKA
VWLRRDQFVV VRPIAEGDKV KGEIEYILDQ DNVLYIRELG KWPSCFEEHA LKMTREAKRG
KANDKMIDDD MLPPSESEEE DDESEDEIED TYDEDEETDD EEFDTYNPNR MQAPSK