EIF3C_VANPO
ID EIF3C_VANPO Reviewed; 809 AA.
AC A7TML4;
DT 03-MAR-2009, integrated into UniProtKB/Swiss-Prot.
DT 02-OCT-2007, sequence version 1.
DT 03-AUG-2022, entry version 70.
DE RecName: Full=Eukaryotic translation initiation factor 3 subunit C {ECO:0000255|HAMAP-Rule:MF_03002};
DE Short=eIF3c {ECO:0000255|HAMAP-Rule:MF_03002};
DE AltName: Full=Eukaryotic translation initiation factor 3 93 kDa subunit homolog {ECO:0000255|HAMAP-Rule:MF_03002};
DE Short=eIF3 p93 {ECO:0000255|HAMAP-Rule:MF_03002};
DE AltName: Full=Translation initiation factor eIF3, p93 subunit homolog {ECO:0000255|HAMAP-Rule:MF_03002};
GN Name=NIP1 {ECO:0000255|HAMAP-Rule:MF_03002}; ORFNames=Kpol_513p28;
OS Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294 / BCRC 21397 / CBS
OS 2163 / NBRC 10782 / NRRL Y-8283 / UCD 57-17) (Kluyveromyces polysporus).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes;
OC Saccharomycetales; Saccharomycetaceae; Vanderwaltozyma.
OX NCBI_TaxID=436907;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 22028 / DSM 70294 / BCRC 21397 / CBS 2163 / NBRC 10782 / NRRL
RC Y-8283 / UCD 57-17;
RX PubMed=17494770; DOI=10.1073/pnas.0608218104;
RA Scannell D.R., Frank A.C., Conant G.C., Byrne K.P., Woolfit M., Wolfe K.H.;
RT "Independent sorting-out of thousands of duplicated gene pairs in two yeast
RT species descended from a whole-genome duplication.";
RL Proc. Natl. Acad. Sci. U.S.A. 104:8397-8402(2007).
CC -!- FUNCTION: Component of the eukaryotic translation initiation factor 3
CC (eIF-3) complex, which is involved in protein synthesis of a
CC specialized repertoire of mRNAs and, together with other initiation
CC factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S
CC ribosome. The eIF-3 complex specifically targets and initiates
CC translation of a subset of mRNAs involved in cell proliferation.
CC {ECO:0000255|HAMAP-Rule:MF_03002}.
CC -!- SUBUNIT: Component of the eukaryotic translation initiation factor 3
CC (eIF-3) complex. {ECO:0000255|HAMAP-Rule:MF_03002}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_03002}.
CC -!- SIMILARITY: Belongs to the eIF-3 subunit C family. {ECO:0000255|HAMAP-
CC Rule:MF_03002}.
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DR EMBL; DS480423; EDO16512.1; -; Genomic_DNA.
DR RefSeq; XP_001644370.1; XM_001644320.1.
DR AlphaFoldDB; A7TML4; -.
DR SMR; A7TML4; -.
DR STRING; 436907.A7TML4; -.
DR EnsemblFungi; EDO16512; EDO16512; Kpol_513p28.
DR GeneID; 5544645; -.
DR KEGG; vpo:Kpol_513p28; -.
DR eggNOG; KOG1076; Eukaryota.
DR HOGENOM; CLU_004304_0_2_1; -.
DR InParanoid; A7TML4; -.
DR OMA; VVMHRSE; -.
DR OrthoDB; 273138at2759; -.
DR PhylomeDB; A7TML4; -.
DR Proteomes; UP000000267; Unassembled WGS sequence.
DR GO; GO:0016282; C:eukaryotic 43S preinitiation complex; IEA:UniProtKB-UniRule.
DR GO; GO:0033290; C:eukaryotic 48S preinitiation complex; IEA:UniProtKB-UniRule.
DR GO; GO:0005852; C:eukaryotic translation initiation factor 3 complex; IEA:UniProtKB-UniRule.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-UniRule.
DR GO; GO:0031369; F:translation initiation factor binding; IEA:InterPro.
DR GO; GO:0001732; P:formation of cytoplasmic translation initiation complex; IEA:UniProtKB-UniRule.
DR HAMAP; MF_03002; eIF3c; 1.
DR InterPro; IPR027516; EIF3C.
DR InterPro; IPR008905; EIF3C_N_dom.
DR InterPro; IPR000717; PCI_dom.
DR PANTHER; PTHR13937; PTHR13937; 1.
DR Pfam; PF05470; eIF-3c_N; 2.
DR Pfam; PF01399; PCI; 1.
DR SMART; SM00088; PINT; 1.
DR PROSITE; PS50250; PCI; 1.
PE 3: Inferred from homology;
KW Cytoplasm; Initiation factor; Protein biosynthesis; Reference proteome.
FT CHAIN 1..809
FT /note="Eukaryotic translation initiation factor 3 subunit
FT C"
FT /id="PRO_0000364290"
FT DOMAIN 605..780
FT /note="PCI"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01185"
FT REGION 1..102
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 9..32
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 33..57
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 58..78
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 809 AA; 91518 MW; 90E9A065A7EB068A CRC64;
MSRFFAASYE YDSASSSSEE DLLSSSEEEL LSSSSLSEEE SDDSFFNDSE SESDFDSDDS
DAKPYGPDWF KKQEFRRGGG GGNKFLKGAS YSDSDESDEA SKKVVKSAKE KLLDEMQTSS
GKIDAAELTN DWITILNEFD SVTRLLTRAQ QQNFGTPNIF VKVVAQVEDA VAASQEEINN
KAVAKAFNTA KQRVKKISRE HQTLLAKYRE DPESFEKETS VEVDATPELA QFAVGKKTTD
LSSIATTSSE TGFFPALSIV LDSRGKKNID QQALAQSMDD LLQTTKTPYE KIIAYLTLIP
IRLDSSTNLS YQPIDQWKAT YNDVSSLLSI LDENINTYQV SELAPFNDSL ENEPEANEKG
VKTILGSILS FVDRLDDEFT KSLLNTDPHS SDYLIRLRDE QAIYNLILRT QLYLEATLPE
DRQIDLLSRI FVRRLNHIYY KSNELIRIME VAAWKVAPSS YTSKLTPYDG AVSDSYLSGV
ISTLTDALSK QQNQSLRKRA VLYNVYYTAL NKEFQVAKDM LIESKVQSFI NKSDPSLQIL
FNRVVVQLGL SAFKLCLIEE CHQILNDLLA SSHLREILGQ QTLQRVTAHS NSSNADEREK
LCLPFHEHIN LDLIDVVFMT CSLLIEIPQM TAFYSGIKIK KIPYSQKSIR RALEHYEKSS
FQGPPETLRD YILHSAKEMQ KGNWKKSFEL LKSIQAWALL PNSASVLDNL AERLQVESLK
TYFFTNKRFY SKLSMKKLSD LFNLPEDKIV ESLQAVITEY EIDASFNEDK SVLSIAKGAE
ITKLEEVASK LNKEVKITKE RLHPSRGRR