EIF3E_MOUSE
ID EIF3E_MOUSE Reviewed; 445 AA.
AC P60229; O43902; Q64058; Q64059; Q64252;
DT 16-JAN-2004, integrated into UniProtKB/Swiss-Prot.
DT 16-JAN-2004, sequence version 1.
DT 03-AUG-2022, entry version 159.
DE RecName: Full=Eukaryotic translation initiation factor 3 subunit E {ECO:0000255|HAMAP-Rule:MF_03004};
DE Short=eIF3e {ECO:0000255|HAMAP-Rule:MF_03004};
DE AltName: Full=Eukaryotic translation initiation factor 3 subunit 6 {ECO:0000255|HAMAP-Rule:MF_03004};
DE AltName: Full=MMTV integration site 6;
DE AltName: Full=Mammary tumor-associated protein INT-6;
DE AltName: Full=Viral integration site protein INT-6;
DE AltName: Full=eIF-3 p48 {ECO:0000255|HAMAP-Rule:MF_03004};
GN Name=Eif3e; Synonyms=Eif3s6, Int6;
OS Mus musculus (Mouse).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC Murinae; Mus; Mus.
OX NCBI_TaxID=10090;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA], AND INVOLVEMENT IN MAMMARY TUMORS.
RX PubMed=7853537; DOI=10.1128/jvi.69.3.1932-1938.1995;
RA Marchetti A., Buttitta F., Miyazaki S., Gallahan D., Smith G.H.,
RA Callahan R.;
RT "Int-6, a highly conserved, widely expressed gene, is mutated by mouse
RT mammary tumor virus in mammary preneoplasia.";
RL J. Virol. 69:1932-1938(1995).
RN [2]
RP NUCLEOTIDE SEQUENCE.
RX PubMed=9260927; DOI=10.1089/dna.1997.16.839;
RA Diella F., Levi G., Callahan R.;
RT "Characterization of the INT6 mammary tumor gene product.";
RL DNA Cell Biol. 16:839-847(1997).
RN [3]
RP SEQUENCE REVISION TO N-TERMINUS.
RA Callahan R.;
RL Submitted (FEB-1997) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=Czech II; TISSUE=Mammary gland;
RX PubMed=15489334; DOI=10.1101/gr.2596504;
RG The MGC Project Team;
RT "The status, quality, and expansion of the NIH full-length cDNA project:
RT the Mammalian Gene Collection (MGC).";
RL Genome Res. 14:2121-2127(2004).
RN [5]
RP PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT TYR-445, AND IDENTIFICATION BY
RP MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RX PubMed=15592455; DOI=10.1038/nbt1046;
RA Rush J., Moritz A., Lee K.A., Guo A., Goss V.L., Spek E.J., Zhang H.,
RA Zha X.-M., Polakiewicz R.D., Comb M.J.;
RT "Immunoaffinity profiling of tyrosine phosphorylation in cancer cells.";
RL Nat. Biotechnol. 23:94-101(2005).
RN [6]
RP FUNCTION, CHARACTERIZATION OF THE EIF-3 COMPLEX, IDENTIFICATION IN THE
RP EIF-3 COMPLEX, AND IDENTIFICATION BY MASS SPECTROMETRY.
RX PubMed=17581632; DOI=10.1038/sj.emboj.7601765;
RA Masutani M., Sonenberg N., Yokoyama S., Imataka H.;
RT "Reconstitution reveals the functional core of mammalian eIF3.";
RL EMBO J. 26:3373-3383(2007).
RN [7]
RP PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT THR-439, AND IDENTIFICATION BY
RP MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RC TISSUE=Embryonic fibroblast;
RX PubMed=17525332; DOI=10.1126/science.1140321;
RA Matsuoka S., Ballif B.A., Smogorzewska A., McDonald E.R. III, Hurov K.E.,
RA Luo J., Bakalarski C.E., Zhao Z., Solimini N., Lerenthal Y., Shiloh Y.,
RA Gygi S.P., Elledge S.J.;
RT "ATM and ATR substrate analysis reveals extensive protein networks
RT responsive to DNA damage.";
RL Science 316:1160-1166(2007).
RN [8]
RP IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RC TISSUE=Brain, Brown adipose tissue, Heart, Kidney, Liver, Lung, Pancreas,
RC Spleen, and Testis;
RX PubMed=21183079; DOI=10.1016/j.cell.2010.12.001;
RA Huttlin E.L., Jedrychowski M.P., Elias J.E., Goswami T., Rad R.,
RA Beausoleil S.A., Villen J., Haas W., Sowa M.E., Gygi S.P.;
RT "A tissue-specific atlas of mouse protein phosphorylation and expression.";
RL Cell 143:1174-1189(2010).
CC -!- FUNCTION: Component of the eukaryotic translation initiation factor 3
CC (eIF-3) complex, which is required for several steps in the initiation
CC of protein synthesis. The eIF-3 complex associates with the 40S
CC ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF-
CC 2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre-initiation complex
CC (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC
CC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also
CC required for disassembly and recycling of post-termination ribosomal
CC complexes and subsequently prevents premature joining of the 40S and
CC 60S ribosomal subunits prior to initiation. The eIF-3 complex
CC specifically targets and initiates translation of a subset of mRNAs
CC involved in cell proliferation, including cell cycling, differentiation
CC and apoptosis, and uses different modes of RNA stem-loop binding to
CC exert either translational activation or repression. Required for
CC nonsense-mediated mRNA decay (NMD); may act in conjunction with UPF2 to
CC divert mRNAs from translation to the NMD pathway. May interact with
CC MCM7 and EPAS1 and regulate the proteasome-mediated degradation of
CC these proteins. {ECO:0000255|HAMAP-Rule:MF_03004,
CC ECO:0000269|PubMed:17581632}.
CC -!- SUBUNIT: Component of the eukaryotic translation initiation factor 3
CC (eIF-3) complex, which is composed of 13 subunits: EIF3A, EIF3B, EIF3C,
CC EIF3D, EIF3E, EIF3F, EIF3G, EIF3H, EIF3I, EIF3J, EIF3K, EIF3L and
CC EIF3M. The eIF-3 complex appears to include 3 stable modules: module A
CC is composed of EIF3A, EIF3B, EIF3G and EIF3I; module B is composed of
CC EIF3F, EIF3H, and EIF3M; and module C is composed of EIF3C, EIF3D,
CC EIF3E, EIF3K and EIF3L. EIF3C of module C binds EIF3B of module A and
CC EIF3H of module B, thereby linking the three modules. EIF3J is a labile
CC subunit that binds to the eIF-3 complex via EIF3B. The eIF-3 complex
CC interacts with RPS6KB1 under conditions of nutrient depletion.
CC Mitogenic stimulation leads to binding and activation of a complex
CC composed of MTOR and RPTOR, leading to phosphorylation and release of
CC RPS6KB1 and binding of EIF4B to eIF-3. Interacts with COPS3, COPS6,
CC COPS7 (COPS7A or COPS7B), EIF4G1, EPAS1, MCM7, NCBP1, PSMC6, TRIM27 and
CC UPF2 (By similarity). Interacts with IFIT1 and IFIT2 (By similarity).
CC Interacts with BZW2/5MP1 (By similarity).
CC {ECO:0000250|UniProtKB:P60228, ECO:0000255|HAMAP-Rule:MF_03004}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_03004}.
CC Nucleus, PML body {ECO:0000255|HAMAP-Rule:MF_03004}.
CC -!- TISSUE SPECIFICITY: Ubiquitously expressed.
CC -!- DISEASE: Note=EIF3E serves as a site for viral integration of mouse
CC mammary tumor virus (MMTV) in mammary tumors. MMTV integration into
CC EIF3E can result in EIF3E truncation and expression of chimeric RNA
CC species which terminate at a cryptic transcription stop signal in the
CC reverse U3 portion of the MMTV long terminal repeat. This causes
CC deregulation of the normal control of mammary epithelial cell growth.
CC {ECO:0000269|PubMed:7853537}.
CC -!- SIMILARITY: Belongs to the eIF-3 subunit E family. {ECO:0000255|HAMAP-
CC Rule:MF_03004}.
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DR EMBL; S75221; AAC00046.1; -; Genomic_DNA.
DR EMBL; S75223; AAC00047.1; -; Genomic_DNA.
DR EMBL; BC029177; AAH29177.1; -; mRNA.
DR CCDS; CCDS27452.1; -.
DR RefSeq; NP_032414.1; NM_008388.2.
DR AlphaFoldDB; P60229; -.
DR SMR; P60229; -.
DR BioGRID; 200775; 136.
DR DIP; DIP-44570N; -.
DR IntAct; P60229; 114.
DR MINT; P60229; -.
DR STRING; 10090.ENSMUSP00000022960; -.
DR iPTMnet; P60229; -.
DR PhosphoSitePlus; P60229; -.
DR SwissPalm; P60229; -.
DR CPTAC; non-CPTAC-3790; -.
DR EPD; P60229; -.
DR jPOST; P60229; -.
DR PaxDb; P60229; -.
DR PeptideAtlas; P60229; -.
DR PRIDE; P60229; -.
DR ProteomicsDB; 275521; -.
DR Antibodypedia; 13407; 304 antibodies from 33 providers.
DR DNASU; 16341; -.
DR Ensembl; ENSMUST00000022960; ENSMUSP00000022960; ENSMUSG00000022336.
DR GeneID; 16341; -.
DR KEGG; mmu:16341; -.
DR UCSC; uc007vpj.1; mouse.
DR CTD; 3646; -.
DR MGI; MGI:99257; Eif3e.
DR VEuPathDB; HostDB:ENSMUSG00000022336; -.
DR eggNOG; KOG2758; Eukaryota.
DR GeneTree; ENSGT00390000002661; -.
DR HOGENOM; CLU_031132_0_1_1; -.
DR InParanoid; P60229; -.
DR OMA; TWGKLAC; -.
DR OrthoDB; 1151808at2759; -.
DR PhylomeDB; P60229; -.
DR TreeFam; TF101518; -.
DR Reactome; R-MMU-156827; L13a-mediated translational silencing of Ceruloplasmin expression.
DR Reactome; R-MMU-72649; Translation initiation complex formation.
DR Reactome; R-MMU-72689; Formation of a pool of free 40S subunits.
DR Reactome; R-MMU-72695; Formation of the ternary complex, and subsequently, the 43S complex.
DR Reactome; R-MMU-72702; Ribosomal scanning and start codon recognition.
DR Reactome; R-MMU-72706; GTP hydrolysis and joining of the 60S ribosomal subunit.
DR BioGRID-ORCS; 16341; 24 hits in 75 CRISPR screens.
DR ChiTaRS; Eif3e; mouse.
DR PRO; PR:P60229; -.
DR Proteomes; UP000000589; Chromosome 15.
DR RNAct; P60229; protein.
DR Bgee; ENSMUSG00000022336; Expressed in epithelium of cochlear duct and 240 other tissues.
DR ExpressionAtlas; P60229; baseline and differential.
DR Genevisible; P60229; MM.
DR GO; GO:0005737; C:cytoplasm; ISO:MGI.
DR GO; GO:0005829; C:cytosol; ISO:MGI.
DR GO; GO:0016282; C:eukaryotic 43S preinitiation complex; IEA:UniProtKB-UniRule.
DR GO; GO:0033290; C:eukaryotic 48S preinitiation complex; IEA:UniProtKB-UniRule.
DR GO; GO:0005852; C:eukaryotic translation initiation factor 3 complex; IDA:UniProtKB.
DR GO; GO:0071540; C:eukaryotic translation initiation factor 3 complex, eIF3e; IEA:UniProtKB-UniRule.
DR GO; GO:0005634; C:nucleus; ISO:MGI.
DR GO; GO:0016605; C:PML body; ISO:MGI.
DR GO; GO:0047485; F:protein N-terminus binding; ISO:MGI.
DR GO; GO:0003743; F:translation initiation factor activity; ISO:MGI.
DR GO; GO:0001732; P:formation of cytoplasmic translation initiation complex; IEA:UniProtKB-UniRule.
DR GO; GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; ISS:UniProtKB.
DR GO; GO:1902416; P:positive regulation of mRNA binding; ISO:MGI.
DR GO; GO:0045727; P:positive regulation of translation; ISO:MGI.
DR GO; GO:0006413; P:translational initiation; IDA:UniProtKB.
DR HAMAP; MF_03004; eIF3e; 1.
DR InterPro; IPR016650; eIF3e.
DR InterPro; IPR019010; eIF3e_N.
DR InterPro; IPR000717; PCI_dom.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR10317; PTHR10317; 1.
DR Pfam; PF09440; eIF3_N; 1.
DR Pfam; PF01399; PCI; 1.
DR PIRSF; PIRSF016255; eIF3e_su6; 1.
DR SMART; SM01186; eIF3_N; 1.
DR SMART; SM00088; PINT; 1.
DR SUPFAM; SSF46785; SSF46785; 1.
DR PROSITE; PS50250; PCI; 1.
PE 1: Evidence at protein level;
KW Acetylation; Cytoplasm; Initiation factor; Nucleus; Phosphoprotein;
KW Protein biosynthesis; Reference proteome.
FT INIT_MET 1
FT /note="Removed"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_03004"
FT CHAIN 2..445
FT /note="Eukaryotic translation initiation factor 3 subunit
FT E"
FT /id="PRO_0000123516"
FT DOMAIN 221..398
FT /note="PCI"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01185"
FT REGION 4..128
FT /note="Sufficient for interaction with EPAS1"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_03004"
FT REGION 9..195
FT /note="Sufficient for interaction with TRIM27"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_03004"
FT REGION 351..445
FT /note="Sufficient for interaction with MCM7"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_03004"
FT MOD_RES 2
FT /note="N-acetylalanine"
FT /evidence="ECO:0000250|UniProtKB:P60228, ECO:0000255|HAMAP-
FT Rule:MF_03004"
FT MOD_RES 399
FT /note="Phosphoserine"
FT /evidence="ECO:0000250|UniProtKB:P60228"
FT MOD_RES 439
FT /note="Phosphothreonine"
FT /evidence="ECO:0007744|PubMed:17525332"
FT MOD_RES 442
FT /note="Phosphoserine"
FT /evidence="ECO:0000250|UniProtKB:P60228"
FT MOD_RES 445
FT /note="Phosphotyrosine"
FT /evidence="ECO:0007744|PubMed:15592455"
SQ SEQUENCE 445 AA; 52221 MW; A5368651DD0DDD0C CRC64;
MAEYDLTTRI AHFLDRHLVF PLLEFLSVKE IYNEKELLQG KLDLLSDTNM VDFAMDVYKN
LYSDDIPHAL REKRTTVVAQ LKQLQAETEP IVKMFEDPET TRQMQSTRDG RMLFDYLADK
HGFRQEYLDT LYRYAKFQYE CGNYSGAAEY LYFFRVLVPA TDRNALSSLW GKLASEILMQ
NWDAAMEDLT RLKETIDNNS VSSPLQSLQQ RTWLIHWSLF VFFNHPKGRD NIIDLFLYQP
QYLNAIQTMC PHILRYLTTA VITNKDVRKR RQVLKDLVKV IQQESYTYKD PITEFVECLY
VNFDFDGAQK KLRECESVLV NDFFLVACLE DFIENARLFI FETFCRIHQC ISINMLADKL
NMTPEEAERW IVNLIRNARL DAKIDSKLGH VVMGNNAVSP YQQVIEKTKS LSFRSQMLAM
NIEKKLNQNS RSEAPNWATQ DSGFY
