ELOF1_HUMAN
ID ELOF1_HUMAN Reviewed; 83 AA.
AC P60002; Q8R1J7; Q96II4;
DT 14-NOV-2003, integrated into UniProtKB/Swiss-Prot.
DT 14-NOV-2003, sequence version 1.
DT 03-AUG-2022, entry version 123.
DE RecName: Full=Transcription elongation factor 1 homolog;
GN Name=ELOF1;
OS Homo sapiens (Human).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
OX NCBI_TaxID=9606;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Muscle;
RX PubMed=15489334; DOI=10.1101/gr.2596504;
RG The MGC Project Team;
RT "The status, quality, and expansion of the NIH full-length cDNA project:
RT the Mammalian Gene Collection (MGC).";
RL Genome Res. 14:2121-2127(2004).
CC -!- FUNCTION: Transcription elongation factor implicated in the maintenance
CC of proper chromatin structure in actively transcribed regions.
CC {ECO:0000250}.
CC -!- INTERACTION:
CC P60002; Q49AR2: C5orf22; NbExp=6; IntAct=EBI-714648, EBI-746224;
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the ELOF1 family. {ECO:0000305}.
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DR EMBL; BC007516; AAH07516.1; -; mRNA.
DR CCDS; CCDS12264.1; -.
DR CCDS; CCDS86703.1; -.
DR RefSeq; NP_115753.1; NM_032377.3.
DR RefSeq; XP_016882847.1; XM_017027358.1.
DR RefSeq; XP_016882848.1; XM_017027359.1.
DR AlphaFoldDB; P60002; -.
DR SMR; P60002; -.
DR BioGRID; 124061; 26.
DR IntAct; P60002; 7.
DR MINT; P60002; -.
DR STRING; 9606.ENSP00000252445; -.
DR iPTMnet; P60002; -.
DR PhosphoSitePlus; P60002; -.
DR BioMuta; ELOF1; -.
DR DMDM; 38372864; -.
DR EPD; P60002; -.
DR jPOST; P60002; -.
DR MassIVE; P60002; -.
DR MaxQB; P60002; -.
DR PaxDb; P60002; -.
DR PeptideAtlas; P60002; -.
DR PRIDE; P60002; -.
DR ProteomicsDB; 57177; -.
DR Antibodypedia; 13205; 88 antibodies from 23 providers.
DR DNASU; 84337; -.
DR Ensembl; ENST00000252445.7; ENSP00000252445.3; ENSG00000130165.10.
DR Ensembl; ENST00000586120.5; ENSP00000467914.1; ENSG00000130165.10.
DR Ensembl; ENST00000590700.5; ENSP00000467264.1; ENSG00000130165.10.
DR GeneID; 84337; -.
DR KEGG; hsa:84337; -.
DR MANE-Select; ENST00000252445.8; ENSP00000252445.3; NM_032377.4; NP_115753.1.
DR UCSC; uc002mse.1; human.
DR CTD; 84337; -.
DR DisGeNET; 84337; -.
DR GeneCards; ELOF1; -.
DR HGNC; HGNC:28691; ELOF1.
DR HPA; ENSG00000130165; Low tissue specificity.
DR MIM; 619818; gene.
DR neXtProt; NX_P60002; -.
DR OpenTargets; ENSG00000130165; -.
DR PharmGKB; PA142671911; -.
DR VEuPathDB; HostDB:ENSG00000130165; -.
DR eggNOG; KOG3214; Eukaryota.
DR GeneTree; ENSGT00390000000053; -.
DR HOGENOM; CLU_105983_2_0_1; -.
DR InParanoid; P60002; -.
DR OMA; ISCRVCS; -.
DR PhylomeDB; P60002; -.
DR TreeFam; TF313731; -.
DR PathwayCommons; P60002; -.
DR SignaLink; P60002; -.
DR BioGRID-ORCS; 84337; 249 hits in 1088 CRISPR screens.
DR ChiTaRS; ELOF1; human.
DR GenomeRNAi; 84337; -.
DR Pharos; P60002; Tbio.
DR PRO; PR:P60002; -.
DR Proteomes; UP000005640; Chromosome 19.
DR RNAct; P60002; protein.
DR Bgee; ENSG00000130165; Expressed in left testis and 179 other tissues.
DR ExpressionAtlas; P60002; baseline and differential.
DR Genevisible; P60002; HS.
DR GO; GO:0008023; C:transcription elongation factor complex; IBA:GO_Central.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0000993; F:RNA polymerase II complex binding; IBA:GO_Central.
DR GO; GO:0006368; P:transcription elongation from RNA polymerase II promoter; IBA:GO_Central.
DR Gene3D; 2.20.25.190; -; 1.
DR InterPro; IPR007808; Elf1.
DR InterPro; IPR038567; T_Elf1_sf.
DR PANTHER; PTHR20934; PTHR20934; 1.
DR Pfam; PF05129; Elf1; 1.
PE 1: Evidence at protein level;
KW Metal-binding; Nucleus; Reference proteome; Transcription;
KW Transcription regulation; Zinc; Zinc-finger.
FT CHAIN 1..83
FT /note="Transcription elongation factor 1 homolog"
FT /id="PRO_0000120941"
FT BINDING 26
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000250|UniProtKB:P60003"
FT BINDING 29
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000250|UniProtKB:P60003"
FT BINDING 50
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000250|UniProtKB:P60003"
FT BINDING 53
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000250|UniProtKB:P60003"
SQ SEQUENCE 83 AA; 9462 MW; 77F11EFBEC72AC6F CRC64;
MGRRKSKRKP PPKKKMTGTL ETQFTCPFCN HEKSCDVKMD RARNTGVISC TVCLEEFQTP
ITYLSEPVDV YSDWIDACEA ANQ