EM1_ARATH
ID EM1_ARATH Reviewed; 152 AA.
AC Q07187;
DT 01-NOV-1995, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1995, sequence version 1.
DT 03-AUG-2022, entry version 119.
DE RecName: Full=Em-like protein GEA1;
DE Short=EM1;
GN Name=EM1; OrderedLocusNames=At3g51810; ORFNames=ATEM1.6;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=8492809; DOI=10.1007/bf00292000;
RA Gaubier P., Raynal M., Hull G., Huestis G.M., Grellet F., Arenas C.,
RA Pages M., Delseny M.;
RT "Two different Em-like genes are expressed in Arabidopsis thaliana seeds
RT during maturation.";
RL Mol. Gen. Genet. 238:409-418(1993).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10645728; DOI=10.1023/a:1006395324818;
RA Comella P., Wu H.-J., Laudie M., Berger C., Cooke R., Delseny M.,
RA Grellet F.;
RT "Fine sequence analysis of 60 kb around the Arabidopsis thaliana AtEm1
RT locus on chromosome III.";
RL Plant Mol. Biol. 41:687-700(1999).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
CC -!- FUNCTION: It is thought to provide protection for the cytoplasm during
CC the desiccation stage of embryo development.
CC -!- TISSUE SPECIFICITY: In seeds only. Specifically located to vascular
CC bundles in the cotyledon and axis of the dry seed. Also found in the
CC epiderm and outer layers of the cortex in the embryo axis.
CC -!- DEVELOPMENTAL STAGE: First appears in immature seeds and is maximally
CC expressed in dry seeds.
CC -!- INDUCTION: By abscisic acid (ABA).
CC -!- SIMILARITY: Belongs to the small hydrophilic plant seed protein family.
CC {ECO:0000305}.
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DR EMBL; Z11158; CAA77509.1; -; Genomic_DNA.
DR EMBL; Z11921; CAA77979.1; -; Genomic_DNA.
DR EMBL; AF049236; AAC14408.1; -; Genomic_DNA.
DR EMBL; CP002686; AEE78847.1; -; Genomic_DNA.
DR EMBL; BT004105; AAO42128.1; -; mRNA.
DR EMBL; BT005464; AAO63884.1; -; mRNA.
DR PIR; S34819; S34819.
DR RefSeq; NP_190749.1; NM_115040.3.
DR AlphaFoldDB; Q07187; -.
DR BioGRID; 9662; 1.
DR STRING; 3702.AT3G51810.1; -.
DR PaxDb; Q07187; -.
DR PRIDE; Q07187; -.
DR ProteomicsDB; 222321; -.
DR EnsemblPlants; AT3G51810.1; AT3G51810.1; AT3G51810.
DR GeneID; 824344; -.
DR Gramene; AT3G51810.1; AT3G51810.1; AT3G51810.
DR KEGG; ath:AT3G51810; -.
DR Araport; AT3G51810; -.
DR TAIR; locus:2074383; AT3G51810.
DR eggNOG; ENOG502S1DH; Eukaryota.
DR HOGENOM; CLU_144393_0_0_1; -.
DR InParanoid; Q07187; -.
DR OrthoDB; 1598665at2759; -.
DR PhylomeDB; Q07187; -.
DR PRO; PR:Q07187; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; Q07187; baseline and differential.
DR Genevisible; Q07187; AT.
DR GO; GO:0005829; C:cytosol; HDA:TAIR.
DR GO; GO:0009737; P:response to abscisic acid; IBA:GO_Central.
DR InterPro; IPR038956; LEA_5.
DR InterPro; IPR022377; Sm_Hydphi_plant_seed_CS.
DR InterPro; IPR000389; Small_hydrophilic_seed_prot.
DR PANTHER; PTHR34671; PTHR34671; 2.
DR Pfam; PF00477; LEA_5; 1.
DR PROSITE; PS00431; SMALL_HYDR_PLANT_SEED; 1.
PE 2: Evidence at transcript level;
KW Reference proteome; Repeat.
FT CHAIN 1..152
FT /note="Em-like protein GEA1"
FT /id="PRO_0000185676"
FT REPEAT 44..63
FT /note="1"
FT REPEAT 64..83
FT /note="2"
FT REPEAT 84..103
FT /note="3"
FT REPEAT 104..123
FT /note="4"
FT REGION 1..63
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 44..123
FT /note="4 X 20 AA tandem repeats"
FT REGION 116..152
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..17
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 34..63
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 132..152
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 152 AA; 16612 MW; EE9E258457D3BB39 CRC64;
MASKQLSREE LDEKAKQGET VVPGGTGGHS LEAQEHLAEG RSKGGQTRKE QLGHEGYQEI
GHKGGEARKE QLGHEGYQEM GHKGGEARKE QLGHEGYQEM GHKGGEARKE QLGHEGYKEM
GRKGGLSTME KSGGERAEEE GIEIDESKFT NK
