EM6_ARATH
ID EM6_ARATH Reviewed; 92 AA.
AC Q02973;
DT 01-NOV-1995, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1995, sequence version 1.
DT 03-AUG-2022, entry version 123.
DE RecName: Full=Em-like protein GEA6;
GN Name=EM6; Synonyms=ATEM6, D19H; OrderedLocusNames=At2g40170;
GN ORFNames=T7M7.23;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=8492809; DOI=10.1007/bf00292000;
RA Gaubier P., Raynal M., Hull G., Huestis G.M., Grellet F., Arenas C.,
RA Pages M., Delseny M.;
RT "Two different Em-like genes are expressed in Arabidopsis thaliana seeds
RT during maturation.";
RL Mol. Gen. Genet. 238:409-418(1993).
RN [2]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=cv. Landsberg erecta;
RX PubMed=8492808; DOI=10.1007/bf00291999;
RA Finkelstein R.R.;
RT "Abscisic acid-insensitive mutations provide evidence for stage-specific
RT signal pathways regulating expression of an Arabidopsis late embryogenesis-
RT abundant (lea) gene.";
RL Mol. Gen. Genet. 238:401-408(1993).
RN [3]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX PubMed=10207155;
RA Wang M.L., Belmonte S., Kim U., Dolan M., Morris J.W., Goodman H.M.;
RT "A cluster of ABA-regulated genes on Arabidopsis thaliana BAC T07M07.";
RL Genome Res. 9:325-333(1999).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617197; DOI=10.1038/45471;
RA Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D.,
RA Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V.,
RA Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S.,
RA Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J.,
RA Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M.,
RA Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O.,
RA Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.;
RT "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.";
RL Nature 402:761-768(1999).
RN [5]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [6]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
CC -!- FUNCTION: It is thought to provide protection for the cytoplasm during
CC the desiccation stage of embryo development.
CC -!- TISSUE SPECIFICITY: Present only in nearly dry and dry seeds.
CC -!- INDUCTION: By abscisic acid (ABA).
CC -!- SIMILARITY: Belongs to the small hydrophilic plant seed protein family.
CC {ECO:0000305}.
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DR EMBL; Z11923; CAA77981.1; -; Genomic_DNA.
DR EMBL; Z11924; CAA77982.1; -; Genomic_DNA.
DR EMBL; X66023; CAA46821.1; -; Genomic_DNA.
DR EMBL; AF085279; AAD25932.1; -; Genomic_DNA.
DR EMBL; CP002685; AEC09792.1; -; Genomic_DNA.
DR EMBL; AF360157; AAK25867.1; -; mRNA.
DR EMBL; AY113885; AAM44933.1; -; mRNA.
DR PIR; S34802; S34802.
DR RefSeq; NP_181546.1; NM_129575.3.
DR AlphaFoldDB; Q02973; -.
DR STRING; 3702.AT2G40170.1; -.
DR PaxDb; Q02973; -.
DR PRIDE; Q02973; -.
DR ProteomicsDB; 222676; -.
DR EnsemblPlants; AT2G40170.1; AT2G40170.1; AT2G40170.
DR GeneID; 818608; -.
DR Gramene; AT2G40170.1; AT2G40170.1; AT2G40170.
DR KEGG; ath:AT2G40170; -.
DR Araport; AT2G40170; -.
DR TAIR; locus:2065041; AT2G40170.
DR eggNOG; ENOG502S40U; Eukaryota.
DR HOGENOM; CLU_144393_0_0_1; -.
DR InParanoid; Q02973; -.
DR OMA; STREEWG; -.
DR OrthoDB; 1598665at2759; -.
DR PhylomeDB; Q02973; -.
DR PRO; PR:Q02973; -.
DR Proteomes; UP000006548; Chromosome 2.
DR ExpressionAtlas; Q02973; baseline and differential.
DR Genevisible; Q02973; AT.
DR GO; GO:0005829; C:cytosol; HDA:TAIR.
DR GO; GO:0048700; P:acquisition of desiccation tolerance in seed; IMP:TAIR.
DR GO; GO:0009737; P:response to abscisic acid; IBA:GO_Central.
DR GO; GO:0048316; P:seed development; IMP:TAIR.
DR InterPro; IPR038956; LEA_5.
DR InterPro; IPR022377; Sm_Hydphi_plant_seed_CS.
DR InterPro; IPR000389; Small_hydrophilic_seed_prot.
DR PANTHER; PTHR34671; PTHR34671; 1.
DR Pfam; PF00477; LEA_5; 1.
DR PROSITE; PS00431; SMALL_HYDR_PLANT_SEED; 1.
PE 2: Evidence at transcript level;
KW Reference proteome.
FT CHAIN 1..92
FT /note="Em-like protein GEA6"
FT /id="PRO_0000185677"
FT REGION 1..92
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..18
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 71..92
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 92 AA; 9934 MW; D35A7879AF773706 CRC64;
MASQQEKKQL DERAKKGETV VPGGTGGKSF EAQQHLAEGR SRGGQTRKEQ LGTEGYQQMG
RKGGLSTGDK PGGEHAEEEG VEIDESKFRT KT
