EMP1_ORYSJ
ID EMP1_ORYSJ Reviewed; 95 AA.
AC P46520; Q0DIY6; Q5W6H4;
DT 01-NOV-1995, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1995, sequence version 1.
DT 25-MAY-2022, entry version 100.
DE RecName: Full=Embryonic abundant protein 1;
GN Name=EMP1; Synonyms=EM; OrderedLocusNames=Os05g0349800, LOC_Os05g28210;
GN ORFNames=OsJ_18167 {ECO:0000312|EMBL:EEE63356.1}, OSJNBa0077J17.4;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=cv. M202;
RX PubMed=1623185; DOI=10.1007/bf00027357;
RA Litts J.C., Erdman M.B., Huang N., Karrer E.E., Noueiry A., Quatrano R.S.,
RA Rodriguez R.L.;
RT "Nucleotide sequence of the rice (Oryza sativa) Em protein gene (Emp1).";
RL Plant Mol. Biol. 19:335-337(1992).
RN [2]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=7599651; DOI=10.1046/j.1365-313x.1995.07060913.x;
RA Hattori T., Terada T., Hamasuna S.;
RT "Regulation of the Osem gene by abscisic acid and the transcriptional
RT activator VP1: analysis of cis-acting promoter elements required for
RT regulation by abscisic acid and VP1.";
RL Plant J. 7:913-925(1995).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16261349; DOI=10.1007/s00438-005-0039-y;
RA Cheng C.-H., Chung M.C., Liu S.-M., Chen S.-K., Kao F.Y., Lin S.-J.,
RA Hsiao S.-H., Tseng I.C., Hsing Y.-I.C., Wu H.-P., Chen C.-S., Shaw J.-F.,
RA Wu J., Matsumoto T., Sasaki T., Chen H.-C., Chow T.-Y.;
RT "A fine physical map of the rice chromosome 5.";
RL Mol. Genet. Genomics 274:337-345(2005).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [5]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [6]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [7]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
RN [8]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12869764; DOI=10.1126/science.1081288;
RG The rice full-length cDNA consortium;
RT "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT japonica rice.";
RL Science 301:376-379(2003).
CC -!- FUNCTION: Em protein may act as a cytoplasm protectant during
CC desiccation.
CC -!- TISSUE SPECIFICITY: Expressed in dry seeds and immature embryos.
CC -!- INDUCTION: By abscisic acid (ABA).
CC -!- MISCELLANEOUS: The induction of Em proteins by abscisic acid may be
CC mediated by the cis-element, termed the ABA-responsive element (ABRE),
CC which binds a Leucine-zipper protein, Em bp1.
CC -!- SIMILARITY: Belongs to the small hydrophilic plant seed protein family.
CC {ECO:0000305}.
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DR EMBL; X63126; CAA44836.1; -; Genomic_DNA.
DR EMBL; U22102; AAA81015.1; -; Genomic_DNA.
DR EMBL; AC136221; AAV44066.1; -; Genomic_DNA.
DR EMBL; AP008211; BAF17187.1; -; Genomic_DNA.
DR EMBL; AP014961; BAS93528.1; -; Genomic_DNA.
DR EMBL; CM000142; EEE63356.1; -; Genomic_DNA.
DR EMBL; AK063677; BAG88819.1; -; mRNA.
DR PIR; S22483; S22483.
DR RefSeq; XP_015638049.1; XM_015782563.1.
DR AlphaFoldDB; P46520; -.
DR STRING; 4530.OS05T0349800-01; -.
DR PaxDb; P46520; -.
DR PRIDE; P46520; -.
DR EnsemblPlants; Os05t0349800-01; Os05t0349800-01; Os05g0349800.
DR GeneID; 4338499; -.
DR Gramene; Os05t0349800-01; Os05t0349800-01; Os05g0349800.
DR KEGG; osa:4338499; -.
DR eggNOG; ENOG502S40U; Eukaryota.
DR HOGENOM; CLU_144393_0_0_1; -.
DR InParanoid; P46520; -.
DR OMA; ERAKHGE; -.
DR OrthoDB; 1598665at2759; -.
DR Proteomes; UP000000763; Chromosome 5.
DR Proteomes; UP000007752; Chromosome 5.
DR Proteomes; UP000059680; Chromosome 5.
DR ExpressionAtlas; P46520; baseline and differential.
DR Genevisible; P46520; OS.
DR GO; GO:0009737; P:response to abscisic acid; IEP:Gramene.
DR InterPro; IPR038956; LEA_5.
DR InterPro; IPR022377; Sm_Hydphi_plant_seed_CS.
DR InterPro; IPR000389; Small_hydrophilic_seed_prot.
DR PANTHER; PTHR34671; PTHR34671; 1.
DR Pfam; PF00477; LEA_5; 1.
DR PROSITE; PS00431; SMALL_HYDR_PLANT_SEED; 1.
PE 2: Evidence at transcript level;
KW Reference proteome.
FT CHAIN 1..95
FT /note="Embryonic abundant protein 1"
FT /id="PRO_0000185686"
FT REGION 1..95
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 44..67
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 75..95
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 95 AA; 10165 MW; A5FADBA52E1271B0 CRC64;
MASGQQQQGR SELDRMAREG QTVVPGGTGG KSLEAQENLA EGRSRGGQTR KEQMGEEGYR
EMGRKGGLST GDESGGERAA REGIDIDESK YKTKS