AGD15_ARATH
ID AGD15_ARATH Reviewed; 232 AA.
AC Q0WQQ1; Q9LUN1;
DT 14-OCT-2008, integrated into UniProtKB/Swiss-Prot.
DT 05-SEP-2006, sequence version 1.
DT 25-MAY-2022, entry version 86.
DE RecName: Full=Probable ADP-ribosylation factor GTPase-activating protein AGD15;
DE Short=ARF GAP AGD15;
DE AltName: Full=Protein ARF-GAP DOMAIN 15;
DE Short=AtAGD15;
GN Name=AGD15; OrderedLocusNames=At3g17660; ORFNames=MKP6.22;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10819329; DOI=10.1093/dnares/7.2.131;
RA Sato S., Nakamura Y., Kaneko T., Katoh T., Asamizu E., Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 3. I. Sequence
RT features of the regions of 4,504,864 bp covered by sixty P1 and TAC
RT clones.";
RL DNA Res. 7:131-135(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A.,
RA Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y.,
RA Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., Akiyama K.,
RA Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y.,
RA Shinozaki K.;
RT "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs.";
RL Submitted (JUL-2006) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=12644670; DOI=10.1104/pp.013052;
RA Vernoud V., Horton A.C., Yang Z., Nielsen E.;
RT "Analysis of the small GTPase gene superfamily of Arabidopsis.";
RL Plant Physiol. 131:1191-1208(2003).
CC -!- FUNCTION: GTPase-activating protein (GAP) for ADP ribosylation factor
CC (ARF). {ECO:0000250}.
CC -!- SEQUENCE CAUTION:
CC Sequence=BAB02056.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AB022219; BAB02056.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002686; AEE75986.1; -; Genomic_DNA.
DR EMBL; AK228639; BAF00548.1; -; mRNA.
DR RefSeq; NP_188393.2; NM_112647.4.
DR AlphaFoldDB; Q0WQQ1; -.
DR SMR; Q0WQQ1; -.
DR STRING; 3702.AT3G17660.1; -.
DR iPTMnet; Q0WQQ1; -.
DR PaxDb; Q0WQQ1; -.
DR ProteomicsDB; 244673; -.
DR EnsemblPlants; AT3G17660.1; AT3G17660.1; AT3G17660.
DR GeneID; 821033; -.
DR Gramene; AT3G17660.1; AT3G17660.1; AT3G17660.
DR KEGG; ath:AT3G17660; -.
DR Araport; AT3G17660; -.
DR TAIR; locus:2090517; AT3G17660.
DR eggNOG; KOG0703; Eukaryota.
DR HOGENOM; CLU_023062_8_0_1; -.
DR InParanoid; Q0WQQ1; -.
DR PhylomeDB; Q0WQQ1; -.
DR PRO; PR:Q0WQQ1; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; Q0WQQ1; baseline and differential.
DR GO; GO:0005096; F:GTPase activator activity; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR Gene3D; 1.10.220.150; -; 1.
DR InterPro; IPR044520; ARF_GAP_AGD5/15.
DR InterPro; IPR037278; ARFGAP/RecO.
DR InterPro; IPR001164; ArfGAP_dom.
DR InterPro; IPR038508; ArfGAP_dom_sf.
DR PANTHER; PTHR46419; PTHR46419; 1.
DR Pfam; PF01412; ArfGap; 1.
DR PRINTS; PR00405; REVINTRACTNG.
DR SMART; SM00105; ArfGap; 1.
DR SUPFAM; SSF57863; SSF57863; 1.
DR PROSITE; PS50115; ARFGAP; 1.
PE 2: Evidence at transcript level;
KW GTPase activation; Metal-binding; Reference proteome; Zinc; Zinc-finger.
FT CHAIN 1..232
FT /note="Probable ADP-ribosylation factor GTPase-activating
FT protein AGD15"
FT /id="PRO_0000352506"
FT DOMAIN 16..130
FT /note="Arf-GAP"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00288"
FT ZN_FING 31..54
FT /note="C4-type"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00288"
FT REGION 203..232
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 204..232
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 232 AA; 26210 MW; E20CDC87505D3B45 CRC64;
MNRKASVSKE LNAKHSKILE ALLKHPDNRE CADCRSKAPR WASVNLGIFI CMQCSGIHRS
LGVHISQVRS ITLDTWLPDQ VAFMKSTGNA KGNEYWESEL PQHFERSSSD TFIRAKYSEK
RWVSPGAIQP APIVSQLSCK VSHLVESGYK PETPKKARTL SLDEEILLHH VLQVTPPETR
TRAGSVDMKE NVYVVPLPEF KKPNQKNENF SSEVNQNRRT TIAPPSSWAT FD