ENDAL_METKA
ID ENDAL_METKA Reviewed; 166 AA.
AC Q8TGZ5;
DT 11-OCT-2004, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-2002, sequence version 1.
DT 25-MAY-2022, entry version 91.
DE RecName: Full=EndA-like protein;
GN OrderedLocusNames=MK0397;
OS Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938).
OC Archaea; Euryarchaeota; Methanopyri; Methanopyrales; Methanopyraceae;
OC Methanopyrus.
OX NCBI_TaxID=190192;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AV19 / DSM 6324 / JCM 9639 / NBRC 100938;
RX PubMed=11930014; DOI=10.1073/pnas.032671499;
RA Slesarev A.I., Mezhevaya K.V., Makarova K.S., Polushin N.N.,
RA Shcherbinina O.V., Shakhova V.V., Belova G.I., Aravind L., Natale D.A.,
RA Rogozin I.B., Tatusov R.L., Wolf Y.I., Stetter K.O., Malykh A.G.,
RA Koonin E.V., Kozyavkin S.A.;
RT "The complete genome of hyperthermophile Methanopyrus kandleri AV19 and
RT monophyly of archaeal methanogens.";
RL Proc. Natl. Acad. Sci. U.S.A. 99:4644-4649(2002).
CC -!- SIMILARITY: Belongs to the tRNA-intron endonuclease family. Archaeal
CC short subfamily. {ECO:0000305}.
CC -!- CAUTION: Although strongly related to the EndA enzyme, it does not
CC contain the conserved Tyr-His-Lys active sites, preventing tRNA-
CC splicing activity. {ECO:0000305}.
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DR EMBL; AE009439; AAM01612.1; -; Genomic_DNA.
DR PDB; 5X89; X-ray; 1.53 A; A=2-166.
DR PDBsum; 5X89; -.
DR AlphaFoldDB; Q8TGZ5; -.
DR SMR; Q8TGZ5; -.
DR STRING; 190192.MK0397; -.
DR EnsemblBacteria; AAM01612; AAM01612; MK0397.
DR KEGG; mka:MK0397; -.
DR HOGENOM; CLU_114393_0_0_2; -.
DR OMA; ENINAIH; -.
DR BRENDA; 4.6.1.16; 3274.
DR Proteomes; UP000001826; Chromosome.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0000213; F:tRNA-intron endonuclease activity; IEA:InterPro.
DR GO; GO:0006388; P:tRNA splicing, via endonucleolytic cleavage and ligation; IEA:InterPro.
DR Gene3D; 3.40.1350.10; -; 1.
DR InterPro; IPR011856; tRNA_endonuc-like_dom_sf.
DR InterPro; IPR036167; tRNA_intron_Endo_cat-like_sf.
DR InterPro; IPR006677; tRNA_intron_Endonuc_cat-like.
DR InterPro; IPR006678; tRNA_intron_Endonuc_N.
DR InterPro; IPR036740; tRNA_intron_Endonuc_N_sf.
DR InterPro; IPR006676; tRNA_splic.
DR InterPro; IPR016442; tRNA_splic_arch_short.
DR PANTHER; PTHR21227; PTHR21227; 1.
DR Pfam; PF01974; tRNA_int_endo; 1.
DR Pfam; PF02778; tRNA_int_endo_N; 1.
DR PIRSF; PIRSF005285; tRNA_splic_archaea; 1.
DR SUPFAM; SSF53032; SSF53032; 1.
DR SUPFAM; SSF55267; SSF55267; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Reference proteome.
FT CHAIN 1..166
FT /note="EndA-like protein"
FT /id="PRO_0000109483"
FT STRAND 3..8
FT /evidence="ECO:0007829|PDB:5X89"
FT STRAND 11..14
FT /evidence="ECO:0007829|PDB:5X89"
FT HELIX 17..24
FT /evidence="ECO:0007829|PDB:5X89"
FT TURN 25..27
FT /evidence="ECO:0007829|PDB:5X89"
FT STRAND 35..38
FT /evidence="ECO:0007829|PDB:5X89"
FT HELIX 40..48
FT /evidence="ECO:0007829|PDB:5X89"
FT STRAND 51..56
FT /evidence="ECO:0007829|PDB:5X89"
FT STRAND 59..61
FT /evidence="ECO:0007829|PDB:5X89"
FT HELIX 63..73
FT /evidence="ECO:0007829|PDB:5X89"
FT HELIX 77..89
FT /evidence="ECO:0007829|PDB:5X89"
FT STRAND 93..98
FT /evidence="ECO:0007829|PDB:5X89"
FT HELIX 99..101
FT /evidence="ECO:0007829|PDB:5X89"
FT STRAND 102..108
FT /evidence="ECO:0007829|PDB:5X89"
FT TURN 109..111
FT /evidence="ECO:0007829|PDB:5X89"
FT STRAND 112..120
FT /evidence="ECO:0007829|PDB:5X89"
FT TURN 121..123
FT /evidence="ECO:0007829|PDB:5X89"
FT HELIX 128..138
FT /evidence="ECO:0007829|PDB:5X89"
FT STRAND 144..150
FT /evidence="ECO:0007829|PDB:5X89"
FT STRAND 156..164
FT /evidence="ECO:0007829|PDB:5X89"
SQ SEQUENCE 166 AA; 19413 MW; 80A7D613FFEBE3AF CRC64;
MAAKGELVGS KVLVRNDRDA NRLYSSMYGK PSRRGLQLWP EEALFLCEIG RLEVRSGNVR
ISPEELMDRF VEEDPRFPVR YAVYADLRRR GWKPKPGRKF GTEFRAFRGE DERIAVKVLQ
EELDEFTAQD ILEWLKLVEG TEFELVVAIV DNDYDLNYYV FSELVL