ENDUA_DANRE
ID ENDUA_DANRE Reviewed; 303 AA.
AC A1L237; A8E5A1;
DT 18-MAY-2010, integrated into UniProtKB/Swiss-Prot.
DT 06-FEB-2007, sequence version 1.
DT 03-AUG-2022, entry version 66.
DE RecName: Full=Uridylate-specific endoribonuclease A {ECO:0000305};
DE EC=4.6.1.- {ECO:0000250|UniProtKB:P21128};
DE AltName: Full=Protein endoU-A;
DE Flags: Precursor;
GN Name=endoua; ORFNames=zgc:158628;
OS Danio rerio (Zebrafish) (Brachydanio rerio).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Danionidae; Danioninae; Danio.
OX NCBI_TaxID=7955;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Liver;
RG NIH - Zebrafish Gene Collection (ZGC) project;
RL Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Endoribonuclease that cleaves single-stranded RNAs at 5' of
CC uridylates and releases a product with a 2',3'-cyclic phosphate at the
CC 3'-end. The UU and GU sites are more efficiently cleaved than CU and AU
CC sites. {ECO:0000250|UniProtKB:P21128}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ribonucleotidyl-uridine-RNA = a 3'-end 2',3'-cyclophospho-
CC ribonucleotide-RNA + a 5'-end dephospho-uridine-RNA;
CC Xref=Rhea:RHEA:67792, Rhea:RHEA-COMP:10464, Rhea:RHEA-COMP:17354,
CC Rhea:RHEA-COMP:17356, ChEBI:CHEBI:83064, ChEBI:CHEBI:173117,
CC ChEBI:CHEBI:173224; Evidence={ECO:0000250|UniProtKB:P21128};
CC PhysiologicalDirection=left-to-right; Xref=Rhea:RHEA:67793;
CC Evidence={ECO:0000250|UniProtKB:P21128};
CC -!- COFACTOR:
CC Name=Mn(2+); Xref=ChEBI:CHEBI:29035; Evidence={ECO:0000250};
CC -!- SUBUNIT: Monomer. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Secreted {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the ENDOU family. {ECO:0000305}.
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DR EMBL; BC129332; AAI29333.1; -; mRNA.
DR EMBL; BC153519; AAI53520.1; -; mRNA.
DR RefSeq; NP_001074167.1; NM_001080698.1.
DR AlphaFoldDB; A1L237; -.
DR SMR; A1L237; -.
DR STRING; 7955.ENSDARP00000104110; -.
DR PaxDb; A1L237; -.
DR PeptideAtlas; A1L237; -.
DR GeneID; 791216; -.
DR KEGG; dre:791216; -.
DR CTD; 8909; -.
DR ZFIN; ZDB-GENE-070112-2012; endou.
DR eggNOG; KOG2849; Eukaryota.
DR InParanoid; A1L237; -.
DR OrthoDB; 823332at2759; -.
DR PhylomeDB; A1L237; -.
DR PRO; PR:A1L237; -.
DR Proteomes; UP000000437; Genome assembly.
DR Proteomes; UP000814640; Unplaced.
DR GO; GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.
DR GO; GO:0004521; F:endoribonuclease activity; ISS:UniProtKB.
DR GO; GO:0016829; F:lyase activity; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; ISS:UniProtKB.
DR CDD; cd21159; XendoU; 1.
DR InterPro; IPR039787; ENDOU.
DR InterPro; IPR037227; EndoU-like.
DR InterPro; IPR018998; EndoU_C.
DR PANTHER; PTHR12439; PTHR12439; 1.
DR Pfam; PF09412; XendoU; 1.
DR SUPFAM; SSF142877; SSF142877; 1.
DR PROSITE; PS51959; ENDOU; 1.
PE 2: Evidence at transcript level;
KW Endonuclease; Glycoprotein; Hydrolase; Lyase; Manganese; Metal-binding;
KW Nuclease; Reference proteome; RNA-binding; Secreted; Signal.
FT SIGNAL 1..19
FT /evidence="ECO:0000255"
FT CHAIN 20..303
FT /note="Uridylate-specific endoribonuclease A"
FT /id="PRO_0000394223"
FT DOMAIN 30..303
FT /note="EndoU"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01304"
FT ACT_SITE 179
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01304"
FT ACT_SITE 194
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01304"
FT ACT_SITE 237
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01304"
FT CARBOHYD 28
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CONFLICT 77
FT /note="P -> L (in Ref. 1; AAI53520)"
FT /evidence="ECO:0000305"
FT CONFLICT 93
FT /note="E -> K (in Ref. 1; AAI53520)"
FT /evidence="ECO:0000305"
FT CONFLICT 195
FT /note="S -> N (in Ref. 1; AAI53520)"
FT /evidence="ECO:0000305"
FT CONFLICT 287
FT /note="S -> T (in Ref. 1; AAI53520)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 303 AA; 33845 MW; 8068CC6894B239C4 CRC64;
MKIILILCLS ITLISQGHFD SLDLSLANVS DAEIKSLSET LYKLDSNRAT ASELLIDPQT
LIPSSQTGSG NDLSPQPLFK VVSSTLLSKP TYEAFLDLLD NYKKMTGEVE DVPSHEEQEQ
DSFLQQTMNT NLGKELFNFL HSKGVYGSQS EFLQDLKMMW FGLYSRSDGV KLDSSGFEHI
FVGEIKGGKV SGFHSWVQFY QCEKQGILNY YSHSFDGPWT TYPDVLGMQF NWDGYFKELG
SAFIGCSPEF DLAIYSLCYI TRPGKKCDVS LGGHSLGIQT YTWDKSSYGD GKKFIGSAYP
ITP