AGL86_ARATH
ID AGL86_ARATH Reviewed; 339 AA.
AC Q9C6V3;
DT 10-FEB-2009, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-2001, sequence version 1.
DT 03-AUG-2022, entry version 120.
DE RecName: Full=Agamous-like MADS-box protein AGL86;
GN Name=AGL86; OrderedLocusNames=At1g31630; ORFNames=F27M3.17;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Underwood B.A., Xiao Y.-L., Moskal W.A. Jr., Monaghan E.L., Wang W.,
RA Redman J.C., Wu H.C., Utterback T., Town C.D.;
RL Submitted (MAY-2005) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP INTERACTION WITH AGL62.
RX PubMed=15805477; DOI=10.1105/tpc.105.031831;
RA de Folter S., Immink R.G.H., Kieffer M., Parenicova L., Henz S.R.,
RA Weigel D., Busscher M., Kooiker M., Colombo L., Kater M.M., Davies B.,
RA Angenent G.C.;
RT "Comprehensive interaction map of the Arabidopsis MADS Box transcription
RT factors.";
RL Plant Cell 17:1424-1433(2005).
RN [5]
RP INTERACTION WITH AGL61.
RX PubMed=18713950; DOI=10.1105/tpc.108.058958;
RA Bemer M., Wolters-Arts M., Grossniklaus U., Angenent G.C.;
RT "The MADS domain protein DIANA acts together with AGAMOUS-LIKE80 to specify
RT the central cell in Arabidopsis ovules.";
RL Plant Cell 20:2088-2101(2008).
CC -!- FUNCTION: Probable transcription factor.
CC -!- SUBUNIT: Interacts with AGL61/DIANA and AGL62.
CC {ECO:0000269|PubMed:15805477, ECO:0000269|PubMed:18713950}.
CC -!- INTERACTION:
CC Q9C6V3; Q9M128: BHLH57; NbExp=3; IntAct=EBI-622448, EBI-15195499;
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00251}.
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DR EMBL; AC074360; AAG60141.1; -; Genomic_DNA.
DR EMBL; CP002684; AEE31378.1; -; Genomic_DNA.
DR EMBL; DQ056473; AAY78630.1; -; mRNA.
DR RefSeq; NP_174444.1; NM_102898.1.
DR AlphaFoldDB; Q9C6V3; -.
DR SMR; Q9C6V3; -.
DR BioGRID; 25285; 24.
DR IntAct; Q9C6V3; 24.
DR STRING; 3702.AT1G31630.1; -.
DR PaxDb; Q9C6V3; -.
DR PRIDE; Q9C6V3; -.
DR EnsemblPlants; AT1G31630.1; AT1G31630.1; AT1G31630.
DR GeneID; 840050; -.
DR Gramene; AT1G31630.1; AT1G31630.1; AT1G31630.
DR KEGG; ath:AT1G31630; -.
DR Araport; AT1G31630; -.
DR TAIR; locus:2028601; AT1G31630.
DR eggNOG; KOG0014; Eukaryota.
DR HOGENOM; CLU_053053_7_1_1; -.
DR InParanoid; Q9C6V3; -.
DR OrthoDB; 1433274at2759; -.
DR PhylomeDB; Q9C6V3; -.
DR PRO; PR:Q9C6V3; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q9C6V3; baseline and differential.
DR Genevisible; Q9C6V3; AT.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; ISS:TAIR.
DR GO; GO:0000981; F:DNA-binding transcription factor activity, RNA polymerase II-specific; IBA:GO_Central.
DR GO; GO:0046983; F:protein dimerization activity; IEA:InterPro.
DR GO; GO:0000978; F:RNA polymerase II cis-regulatory region sequence-specific DNA binding; IBA:GO_Central.
DR GO; GO:0045944; P:positive regulation of transcription by RNA polymerase II; IEA:InterPro.
DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IBA:GO_Central.
DR CDD; cd00266; MADS_SRF_like; 1.
DR Gene3D; 3.40.1810.10; -; 1.
DR InterPro; IPR033897; MADS_SRF-like.
DR InterPro; IPR002100; TF_MADSbox.
DR InterPro; IPR036879; TF_MADSbox_sf.
DR Pfam; PF00319; SRF-TF; 1.
DR PRINTS; PR00404; MADSDOMAIN.
DR SMART; SM00432; MADS; 1.
DR SUPFAM; SSF55455; SSF55455; 1.
DR PROSITE; PS50066; MADS_BOX_2; 1.
PE 1: Evidence at protein level;
KW Coiled coil; DNA-binding; Nucleus; Reference proteome; Transcription;
KW Transcription regulation.
FT CHAIN 1..339
FT /note="Agamous-like MADS-box protein AGL86"
FT /id="PRO_0000363652"
FT DOMAIN 1..60
FT /note="MADS-box"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00251"
FT COILED 86..112
FT /evidence="ECO:0000255"
SQ SEQUENCE 339 AA; 36942 MW; 68D382C8B5C3DAD4 CRC64;
MRSKIKLSLI ANKTSRRTTF RKRKGGITNK LHELTTLCGV KACAVISSPY ENPVVWPSTE
GVQEAVSMFM ERPATEQSKL MMSHETYLQD KITKETKKLE SLRRENRESQ LRQFMFDCVE
GKMSEHQYGA RDLQDLSLYI DHYINQLNSS VMLLTNNGAS SSSFPPPLHT SVAGAGAGAG
AAPLVVAGAG AAPLAVAGAG ASPLAVAGVG AAPLAVAGAG PPMAQNQYEP IQPYIPTAFS
DNIQYQAPVD FNHQIQHGIY DNLSLDPNHQ YPFQDDPFME MLMEYPYEQV GYAAEHAHIP
FMNGNYYNYH QPPTVGLTTT GHMPSNNATT TTTTNTTVV
