AGL92_ARATH
ID AGL92_ARATH Reviewed; 464 AA.
AC Q9C6V4;
DT 10-FEB-2009, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-2001, sequence version 1.
DT 03-AUG-2022, entry version 115.
DE RecName: Full=Agamous-like MADS-box protein AGL92;
GN Name=AGL92; OrderedLocusNames=At1g31640; ORFNames=F27M3.16;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP INTERACTION WITH AGL62.
RX PubMed=15805477; DOI=10.1105/tpc.105.031831;
RA de Folter S., Immink R.G.H., Kieffer M., Parenicova L., Henz S.R.,
RA Weigel D., Busscher M., Kooiker M., Colombo L., Kater M.M., Davies B.,
RA Angenent G.C.;
RT "Comprehensive interaction map of the Arabidopsis MADS Box transcription
RT factors.";
RL Plant Cell 17:1424-1433(2005).
CC -!- FUNCTION: Putative transcription factor.
CC -!- SUBUNIT: Interacts with AGL62. {ECO:0000269|PubMed:15805477}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00251}.
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DR EMBL; AC074360; AAG60139.1; -; Genomic_DNA.
DR EMBL; CP002684; AEE31379.1; -; Genomic_DNA.
DR RefSeq; NP_174445.1; NM_102899.1.
DR AlphaFoldDB; Q9C6V4; -.
DR SMR; Q9C6V4; -.
DR BioGRID; 25286; 11.
DR IntAct; Q9C6V4; 9.
DR STRING; 3702.AT1G31640.1; -.
DR PaxDb; Q9C6V4; -.
DR PRIDE; Q9C6V4; -.
DR EnsemblPlants; AT1G31640.1; AT1G31640.1; AT1G31640.
DR GeneID; 840051; -.
DR Gramene; AT1G31640.1; AT1G31640.1; AT1G31640.
DR KEGG; ath:AT1G31640; -.
DR Araport; AT1G31640; -.
DR TAIR; locus:2028591; AT1G31640.
DR eggNOG; KOG0014; Eukaryota.
DR HOGENOM; CLU_053053_7_1_1; -.
DR InParanoid; Q9C6V4; -.
DR OrthoDB; 1315166at2759; -.
DR PhylomeDB; Q9C6V4; -.
DR PRO; PR:Q9C6V4; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q9C6V4; baseline and differential.
DR Genevisible; Q9C6V4; AT.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; ISS:TAIR.
DR GO; GO:0000981; F:DNA-binding transcription factor activity, RNA polymerase II-specific; IBA:GO_Central.
DR GO; GO:0046983; F:protein dimerization activity; IEA:InterPro.
DR GO; GO:0000978; F:RNA polymerase II cis-regulatory region sequence-specific DNA binding; IBA:GO_Central.
DR GO; GO:0045944; P:positive regulation of transcription by RNA polymerase II; IEA:InterPro.
DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IBA:GO_Central.
DR CDD; cd00266; MADS_SRF_like; 1.
DR Gene3D; 3.40.1810.10; -; 1.
DR InterPro; IPR033897; MADS_SRF-like.
DR InterPro; IPR002100; TF_MADSbox.
DR InterPro; IPR036879; TF_MADSbox_sf.
DR Pfam; PF00319; SRF-TF; 1.
DR PRINTS; PR00404; MADSDOMAIN.
DR SMART; SM00432; MADS; 1.
DR SUPFAM; SSF55455; SSF55455; 1.
DR PROSITE; PS50066; MADS_BOX_2; 1.
PE 1: Evidence at protein level;
KW Coiled coil; DNA-binding; Nucleus; Reference proteome; Transcription;
KW Transcription regulation.
FT CHAIN 1..464
FT /note="Agamous-like MADS-box protein AGL92"
FT /id="PRO_0000363654"
FT DOMAIN 1..60
FT /note="MADS-box"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00251"
FT REGION 443..464
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 85..114
FT /evidence="ECO:0000255"
SQ SEQUENCE 464 AA; 52211 MW; EFFDC12F1135804B CRC64;
MRTKTKLVLI PDRHFRRATF RKRNAGIRKK LHELTTLCDI KACAVIYSPF ENPTVWPSTE
GVQEVISEFM EKPATERSKT MMSHETFLRD QITKEQNKLE SLRRENRETQ LKHFMFDCVG
GKMSEQQYGA RDLQDLSLFT DQYLNQLNAR KKFLTEYGES SSSVPPLFDV AGANPPVVAD
QAAVTVPPLF AVAGANLPVV ADQAAVTVPP LFAVAGANLP VVADQAAVNV PTGFHNMNVN
QNQYEPVQPY VPTGFSDHIQ YQNMNFNQNQ QEPVHYQALA VAGAGLPMTQ NQYEPVHYQS
LAVAGGGLPM SQLQYEPVQP YIPTVFSDNV QYQHMNLYQN QQEPVHYQAL GVAGAGLPMN
QNQYEPVQPY VPTGFSDHFQ FENMNLNQNQ QEPVQYQAPV DFNHQIQQGN YDMNLNQNMK
HAHIPFMDGN YYNYHQPPTV GLTSTGHMPS TTTTTTNNNN NNNV
