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ENV_FOAMV
ID   ENV_FOAMV               Reviewed;         989 AA.
AC   P14351; P90288;
DT   01-JAN-1990, integrated into UniProtKB/Swiss-Prot.
DT   11-JUL-2006, sequence version 2.
DT   23-FEB-2022, entry version 89.
DE   RecName: Full=Envelope glycoprotein gp130;
DE   AltName: Full=Env polyprotein;
DE   Contains:
DE     RecName: Full=Leader peptide;
DE              Short=LP;
DE     AltName: Full=Env leader protein;
DE              Short=Elp;
DE     AltName: Full=gp18LP;
DE   Contains:
DE     RecName: Full=Surface protein;
DE              Short=SU;
DE     AltName: Full=Glycoprotein 80;
DE              Short=gp80;
DE   Contains:
DE     RecName: Full=Transmembrane protein;
DE              Short=TM;
DE     AltName: Full=Glycoprotein 48;
DE              Short=gp48;
GN   Name=env;
OS   Human spumaretrovirus (SFVcpz(hu)) (Human foamy virus).
OC   Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes;
OC   Ortervirales; Retroviridae; Spumaretrovirinae; Spumavirus.
OX   NCBI_TaxID=11963;
OH   NCBI_TaxID=9606; Homo sapiens (Human).
RN   [1]
RP   NUCLEOTIDE SEQUENCE [GENOMIC RNA].
RX   PubMed=2820721; DOI=10.1002/j.1460-2075.1987.tb02473.x;
RA   Fluegel R.M., Rethwilm A., Maurer B., Darai G.;
RT   "Nucleotide sequence analysis of the env gene and its flanking regions of
RT   the human spumaretrovirus reveals two novel genes.";
RL   EMBO J. 6:2077-2084(1987).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [GENOMIC RNA], AND SEQUENCE REVISION.
RA   Fluegel R.M.;
RL   Submitted (FEB-1995) to the EMBL/GenBank/DDBJ databases.
RN   [3]
RP   ENDOPLASMIC RETICULUM RETENTION MOTIF, SUBCELLULAR LOCATION, AND
RP   MUTAGENESIS OF LYS-985 AND 985-LYS--LYS-987.
RX   PubMed=10438808; DOI=10.1128/jvi.73.9.7210-7217.1999;
RA   Goepfert P.A., Shaw K., Wang G., Bansal A., Edwards B.H., Mulligan M.J.;
RT   "An endoplasmic reticulum retrieval signal partitions human foamy virus
RT   maturation to intracytoplasmic membranes.";
RL   J. Virol. 73:7210-7217(1999).
RN   [4]
RP   PROTEOLYTIC PROCESSING OF POLYPROTEIN, AND MUTAGENESIS OF ARG-572.
RX   PubMed=10684317; DOI=10.1128/jvi.74.6.2949-2954.2000;
RA   Bansal A., Shaw K.L., Edwards B.H., Goepfert P.A., Mulligan M.J.;
RT   "Characterization of the R572T point mutant of a putative cleavage site in
RT   human foamy virus Env.";
RL   J. Virol. 74:2949-2954(2000).
RN   [5]
RP   ELECTRON MICROSCOPY (34 ANGSTROMS) OF VIRAL PARTICLES, AND SUBUNIT.
RX   PubMed=10684305; DOI=10.1128/jvi.74.6.2885-2887.2000;
RA   Wilk T., de Haas F., Wagner A., Rutten T., Fuller S.D., Fluegel R.M.,
RA   Loechelt M.;
RT   "The intact retroviral Env glycoprotein of human foamy virus is a trimer.";
RL   J. Virol. 74:2885-2887(2000).
RN   [6]
RP   CHARACTERIZATION OF THE FUSOGENIC REGION.
RX   PubMed=11409874; DOI=10.1006/bbrc.2001.5060;
RA   Epand R.M., Epand R.F.;
RT   "Factors contributing to the fusogenic potency of foamy virus.";
RL   Biochem. Biophys. Res. Commun. 284:870-874(2001).
RN   [7]
RP   FUNCTION OF N-TERMINUS, AND MUTAGENESIS OF TRP-10 AND TRP-13.
RX   PubMed=11390578; DOI=10.1128/jvi.75.13.5762-5771.2001;
RA   Lindemann D., Pietschmann T., Picard-Maureau M., Berg A., Heinkelein M.,
RA   Thurow J., Knaus P., Zentgraf H., Rethwilm A.;
RT   "A particle-associated glycoprotein signal peptide essential for virus
RT   maturation and infectivity.";
RL   J. Virol. 75:5762-5771(2001).
RN   [8]
RP   PROTEIN SEQUENCE OF 127-131, AND PROTEOLYTIC PROCESSING OF POLYPROTEIN.
RX   PubMed=15564494; DOI=10.1128/jvi.78.24.13865-13870.2004;
RA   Duda A., Stange A., Lueftenegger D., Stanke N., Westphal D.,
RA   Pietschmann T., Eastman S.W., Linial M.L., Rethwilm A., Lindemann D.;
RT   "Prototype foamy virus envelope glycoprotein leader peptide processing is
RT   mediated by a furin-like cellular protease, but cleavage is not essential
RT   for viral infectivity.";
RL   J. Virol. 78:13865-13870(2004).
RN   [9]
RP   GLYCOSYLATION AT ASN-109; ASN-141; ASN-183; ASN-286; ASN-311; ASN-346;
RP   ASN-391; ASN-405; ASN-423; ASN-528; ASN-557; ASN-783; ASN-809 AND ASN-834.
RX   PubMed=15919919; DOI=10.1128/jvi.79.12.7664-7672.2005;
RA   Lueftenegger D., Picard-Maureau M., Stanke N., Rethwilm A., Lindemann D.;
RT   "Analysis and function of prototype foamy virus envelope N glycosylation.";
RL   J. Virol. 79:7664-7672(2005).
RN   [10]
RP   UBIQUITINATION OF LEADER PEPTIDE, AND MUTAGENESIS OF LYS-14; LYS-15;
RP   LYS-18; LYS-34 AND LYS-53.
RX   PubMed=16306578; DOI=10.1128/jvi.79.24.15074-15083.2005;
RA   Stanke N., Stange A., Lueftenegger D., Zentgraf H., Lindemann D.;
RT   "Ubiquitination of the prototype foamy virus envelope glycoprotein leader
RT   peptide regulates subviral particle release.";
RL   J. Virol. 79:15074-15083(2005).
RN   [11]
RP   REVIEW.
RX   PubMed=12908770; DOI=10.1007/978-3-642-55701-9_5;
RA   Lindemann D., Goepfert P.A.;
RT   "The foamy virus envelope glycoproteins.";
RL   Curr. Top. Microbiol. Immunol. 277:111-129(2003).
RN   [12]
RP   REVIEW.
RX   PubMed=15358259; DOI=10.1016/j.mib.2004.06.009;
RA   Delelis O., Lehmann-Che J., Saib A.;
RT   "Foamy viruses-a world apart.";
RL   Curr. Opin. Microbiol. 7:400-406(2004).
CC   -!- FUNCTION: The surface protein (SU) attaches the virus to the host cell
CC       by binding to the cell receptor. This interaction triggers the
CC       refolding of transmembrane protein (TM) and is thought to activate its
CC       fusogenic potential by unmasking its fusion peptide (By similarity).
CC       {ECO:0000250}.
CC   -!- FUNCTION: The transmembrane protein (TM) acts as a class I viral fusion
CC       protein. Under the current model, the protein has at least 3
CC       conformational states: pre-fusion native state, pre-hairpin
CC       intermediate state, and post-fusion hairpin state. During viral and
CC       target cell membrane fusion, the coiled coil regions (heptad repeats)
CC       assume a trimer-of-hairpins structure, positioning the fusion peptide
CC       in close proximity to the C-terminal region of the ectodomain. The
CC       formation of this structure appears to drive apposition and subsequent
CC       fusion of viral and target cell membranes. Membranes fusion leads to
CC       delivery of the nucleocapsid into the cytoplasm (By similarity).
CC       {ECO:0000250}.
CC   -!- FUNCTION: The leader peptide is a component of released, infectious
CC       virions and is required for particle budding. {ECO:0000250}.
CC   -!- SUBUNIT: The mature envelope protein consists of a trimer of SU-TM
CC       heterodimers. The N-terminus of leader peptide specifically interacts
CC       with Gag protein. This specific interaction between Gag protein and Env
CC       glycoprotein may allow particle egress (By similarity). {ECO:0000250}.
CC   -!- SUBCELLULAR LOCATION: [Envelope glycoprotein gp130]: Host endoplasmic
CC       reticulum membrane. Note=The polyprotein has a highly unusual
CC       biosynthesis for a retroviral glycoprotein. It is translated as a full-
CC       length precursor protein into the rough endoplasmic reticulum and
CC       initially has a type III protein configuration with both its N and C-
CC       termini located intracytoplasmically (By similarity). {ECO:0000250}.
CC   -!- SUBCELLULAR LOCATION: [Leader peptide]: Virion membrane {ECO:0000250};
CC       Single-pass type II membrane protein {ECO:0000250}. Host endoplasmic
CC       reticulum membrane {ECO:0000250}; Single-pass type II membrane protein
CC       {ECO:0000250}. Note=Its N-terminus is located inside the viral
CC       particle. {ECO:0000250}.
CC   -!- SUBCELLULAR LOCATION: [Transmembrane protein]: Virion membrane
CC       {ECO:0000250}; Single-pass type I membrane protein {ECO:0000250}. Host
CC       endoplasmic reticulum membrane {ECO:0000250}; Single-pass type I
CC       membrane protein {ECO:0000250}.
CC   -!- SUBCELLULAR LOCATION: [Surface protein]: Virion membrane {ECO:0000250};
CC       Peripheral membrane protein {ECO:0000250}. Host endoplasmic reticulum
CC       membrane; Peripheral membrane protein. Note=The surface protein is not
CC       anchored to the viral envelope, but associates with the extravirion
CC       surface through its binding to TM. {ECO:0000305}.
CC   -!- DOMAIN: The ER retention signal plays an important role in establishing
CC       the intracellular site of budding. {ECO:0000250}.
CC   -!- PTM: Envelope glycoproteins are synthesized as an inactive precursor
CC       that is processed by host furin or a furin-like protease to yield a
CC       functional hetero-oligomeric complex. {ECO:0000250}.
CC   -!- PTM: The transmembrane protein and the surface protein are N-
CC       glycosylated. {ECO:0000250}.
CC   -!- PTM: Mono- and polyubiquitinated leader peptide are found in viral
CC       particles. Ubiquitination may be involved in regulating the balance
CC       between viral and subviral particles release (By similarity).
CC       {ECO:0000250}.
CC   -!- MISCELLANEOUS: Foamy viruses are distinct from other retroviruses in
CC       many respects. Their protease is active as an uncleaved Pro-Pol
CC       protein. Mature particles do not include the usual processed retroviral
CC       structural protein (MA, CA and NC), but instead contain two large Gag
CC       proteins. Their functional nucleic acid appears to be either RNA or
CC       dsDNA (up to 20% of extracellular particles), because they probably
CC       proceed either to an early (before integration) or late reverse
CC       transcription (after assembly). Foamy viruses have the ability to
CC       retrotranspose intracellularly with high efficiency. They bud
CC       predominantly into the endoplasmic reticulum (ER) and occasionally at
CC       the plasma membrane. Budding requires the presence of Env proteins.
CC       Most viral particles probably remain within the infected cell.
CC   -!- SEQUENCE CAUTION:
CC       Sequence=AAA46123.1; Type=Erroneous initiation; Evidence={ECO:0000305};
CC       Sequence=CAA29086.1; Type=Erroneous initiation; Evidence={ECO:0000305};
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DR   EMBL; X05591; CAA29086.1; ALT_INIT; Genomic_RNA.
DR   EMBL; M54978; AAA46123.1; ALT_INIT; Genomic_RNA.
DR   EMBL; U21247; AAB48113.1; -; Genomic_RNA.
DR   iPTMnet; P14351; -.
DR   Proteomes; UP000138352; Genome.
DR   GO; GO:0044167; C:host cell endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   GO; GO:0019031; C:viral envelope; IEA:UniProtKB-KW.
DR   GO; GO:0055036; C:virion membrane; IEA:UniProtKB-SubCell.
DR   InterPro; IPR005070; Foamy_env.
DR   Pfam; PF03408; Foamy_virus_ENV; 1.
PE   1: Evidence at protein level;
KW   Cleavage on pair of basic residues; Direct protein sequencing;
KW   Glycoprotein; Host endoplasmic reticulum; Host membrane; Isopeptide bond;
KW   Membrane; Reference proteome; Signal-anchor; Transmembrane;
KW   Transmembrane helix; Ubl conjugation; Viral envelope protein; Virion.
FT   CHAIN           1..989
FT                   /note="Envelope glycoprotein gp130"
FT                   /id="PRO_0000125468"
FT   CHAIN           1..126
FT                   /note="Leader peptide"
FT                   /id="PRO_0000245428"
FT   CHAIN           127..572
FT                   /note="Surface protein"
FT                   /id="PRO_0000245429"
FT   CHAIN           573..989
FT                   /note="Transmembrane protein"
FT                   /id="PRO_0000245430"
FT   TOPO_DOM        1..65
FT                   /note="Cytoplasmic"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        66..88
FT                   /note="Helical; Signal-anchor for type III membrane
FT                   protein"
FT                   /evidence="ECO:0000255"
FT   TOPO_DOM        89..961
FT                   /note="Lumenal"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        962..982
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TOPO_DOM        983..989
FT                   /note="Cytoplasmic"
FT                   /evidence="ECO:0000255"
FT   REGION          1..15
FT                   /note="Involved in virion budding"
FT                   /evidence="ECO:0000255"
FT   REGION          577..599
FT                   /note="Fusion peptide"
FT                   /evidence="ECO:0000305"
FT   MOTIF           985..987
FT                   /note="Endoplasmic reticulum retention signal"
FT   SITE            25
FT                   /note="Not glycosylated"
FT   SITE            126..127
FT                   /note="Cleavage; by host"
FT   SITE            572..573
FT                   /note="Cleavage; by host"
FT   CARBOHYD        109
FT                   /note="N-linked (GlcNAc...) asparagine; by host"
FT                   /evidence="ECO:0000269|PubMed:15919919"
FT   CARBOHYD        141
FT                   /note="N-linked (GlcNAc...) asparagine; by host"
FT                   /evidence="ECO:0000269|PubMed:15919919"
FT   CARBOHYD        183
FT                   /note="N-linked (GlcNAc...) asparagine; by host"
FT                   /evidence="ECO:0000269|PubMed:15919919"
FT   CARBOHYD        286
FT                   /note="N-linked (GlcNAc...) asparagine; by host"
FT                   /evidence="ECO:0000269|PubMed:15919919"
FT   CARBOHYD        311
FT                   /note="N-linked (GlcNAc...) asparagine; by host"
FT                   /evidence="ECO:0000269|PubMed:15919919"
FT   CARBOHYD        346
FT                   /note="N-linked (GlcNAc...) asparagine; by host"
FT                   /evidence="ECO:0000269|PubMed:15919919"
FT   CARBOHYD        391
FT                   /note="N-linked (GlcNAc...) asparagine; by host"
FT                   /evidence="ECO:0000269|PubMed:15919919"
FT   CARBOHYD        405
FT                   /note="N-linked (GlcNAc...) asparagine; by host"
FT                   /evidence="ECO:0000269|PubMed:15919919"
FT   CARBOHYD        423
FT                   /note="N-linked (GlcNAc...) asparagine; by host"
FT                   /evidence="ECO:0000269|PubMed:15919919"
FT   CARBOHYD        528
FT                   /note="N-linked (GlcNAc...) asparagine; by host"
FT                   /evidence="ECO:0000269|PubMed:15919919"
FT   CARBOHYD        557
FT                   /note="N-linked (GlcNAc...) asparagine; by host"
FT                   /evidence="ECO:0000269|PubMed:15919919"
FT   CARBOHYD        783
FT                   /note="N-linked (GlcNAc...) asparagine; by host"
FT                   /evidence="ECO:0000269|PubMed:15919919"
FT   CARBOHYD        809
FT                   /note="N-linked (GlcNAc...) asparagine; by host"
FT                   /evidence="ECO:0000269|PubMed:15919919"
FT   CARBOHYD        834
FT                   /note="N-linked (GlcNAc...) asparagine; by host"
FT                   /evidence="ECO:0000269|PubMed:15919919"
FT   CROSSLNK        14
FT                   /note="Glycyl lysine isopeptide (Lys-Gly) (interchain with
FT                   G-Cter in ubiquitin)"
FT                   /evidence="ECO:0000269|PubMed:16306578"
FT   CROSSLNK        15
FT                   /note="Glycyl lysine isopeptide (Lys-Gly) (interchain with
FT                   G-Cter in ubiquitin)"
FT                   /evidence="ECO:0000269|PubMed:16306578"
FT   CROSSLNK        18
FT                   /note="Glycyl lysine isopeptide (Lys-Gly) (interchain with
FT                   G-Cter in ubiquitin)"
FT                   /evidence="ECO:0000269|PubMed:16306578"
FT   CROSSLNK        34
FT                   /note="Glycyl lysine isopeptide (Lys-Gly) (interchain with
FT                   G-Cter in ubiquitin)"
FT                   /evidence="ECO:0000269|PubMed:16306578"
FT   CROSSLNK        53
FT                   /note="Glycyl lysine isopeptide (Lys-Gly) (interchain with
FT                   G-Cter in ubiquitin)"
FT                   /evidence="ECO:0000269|PubMed:16306578"
FT   MUTAGEN         10
FT                   /note="W->A: Complete loss of particle release; when
FT                   associated with A-13."
FT                   /evidence="ECO:0000269|PubMed:11390578"
FT   MUTAGEN         13
FT                   /note="W->A: Complete loss of particle release; when
FT                   associated with A-10."
FT                   /evidence="ECO:0000269|PubMed:11390578"
FT   MUTAGEN         14
FT                   /note="K->R: Strong increase of subviral particles release;
FT                   when associated with R-15; R-18; R-34 and R-53."
FT                   /evidence="ECO:0000269|PubMed:16306578"
FT   MUTAGEN         15
FT                   /note="K->R: Strong increase of subviral particles release;
FT                   when associated with R-14; R-18; R-34 and R-53."
FT                   /evidence="ECO:0000269|PubMed:16306578"
FT   MUTAGEN         18
FT                   /note="K->R: Strong increase of subviral particles release;
FT                   when associated with R-14; R-15; R-34 and R-53."
FT                   /evidence="ECO:0000269|PubMed:16306578"
FT   MUTAGEN         34
FT                   /note="K->R: Strong increase of subviral particles release;
FT                   when associated with R-14; R-15; R-18 and R-53."
FT                   /evidence="ECO:0000269|PubMed:16306578"
FT   MUTAGEN         53
FT                   /note="K->R: Strong increase of subviral particles release;
FT                   when associated with R-14; R-15; R-18 and R-34."
FT                   /evidence="ECO:0000269|PubMed:16306578"
FT   MUTAGEN         572
FT                   /note="R->T: Complete loss of processing between SU and
FT                   TM."
FT                   /evidence="ECO:0000269|PubMed:10684317"
FT   MUTAGEN         985..987
FT                   /note="KKK->RRR: Increased budding from plasma membrane and
FT                   decreased budding from ER."
FT                   /evidence="ECO:0000269|PubMed:10438808"
FT   MUTAGEN         985..987
FT                   /note="KKK->SSS: Increased budding from plasma membrane and
FT                   decreased budding from ER."
FT                   /evidence="ECO:0000269|PubMed:10438808"
FT   MUTAGEN         985
FT                   /note="K->S: Increased budding from plasma membrane and
FT                   decreased budding from ER."
FT                   /evidence="ECO:0000269|PubMed:10438808"
SQ   SEQUENCE   989 AA;  113891 MW;  E0E8338ECE44E0A5 CRC64;
     MAPPMTLQQW IIWKKMNKAH EALQNTTTVT EQQKEQIILD IQNEEVQPTR RDKFRYLLYT
     CCATSSRVLA WMFLVCILLI IVLVSCFVTI SRIQWNKDIQ VLGPVIDWNV TQRAVYQPLQ
     TRRIARSLRM QHPVPKYVEV NMTSIPQGVY YEPHPEPIVV KERVLGLSQI LMINSENIAN
     NANLTQEVKK LLTEMVNEEM QSLSDVMIDF EIPLGDPRDQ EQYIHRKCYQ EFANCYLVKY
     KEPKPWPKEG LIADQCPLPG YHAGLTYNRQ SIWDYYIKVE SIRPANWTTK SKYGQARLGS
     FYIPSSLRQI NVSHVLFCSD QLYSKWYNIE NTIEQNERFL LNKLNNLTSG TSVLKKRALP
     KDWSSQGKNA LFREINVLDI CSKPESVILL NTSYYSFSLW EGDCNFTKDM ISQLVPECDG
     FYNNSKWMHM HPYACRFWRS KKNEKEETKC RDGETKRCLY YPLWDSPEST YDFGYLAYQK
     NFPSPICIEQ QKIRDQDYEV YSLYQERKIA SKAYGIDTVL FSLKNFLNYT GTPVNEMPNA
     RAFVGLIDPK FPPSYPNVTR EHYTSCNNRK RRSVDNNYAK LRSMGYALTG AVQTLSQISD
     INDENLQQGI YLLRDHVITL MEATLHDISV MEGMFAVQHL HTHLNHLKTM LLERRIDWTY
     MSSTWLQQQL QKSDDEMKVI KRIARSLVYY VKQTHSSPTA TAWEIGLYYE LVIPKHIYLN
     NWNVVNIGHL VKSAGQLTHV TIAHPYEIIN KECVETIYLH LEDCTRQDYV ICDVVKIVQP
     CGNSSDTSDC PVWAEAVKEP FVQVNPLKNG SYLVLASSTD CQIPPYVPSI VTVNETTSCF
     GLDFKRPLVA EERLSFEPRL PNLQLRLPHL VGIIAKIKGI KIEVTSSGES IKEQIERAKA
     ELLRLDIHEG DTPAWIQQLA AATKDVWPAA ASALQGIGNF LSGTAQGIFG TAFSLLGYLK
     PILIGVGVIL LVILIFKIVS WIPTKKKNQ
 
 
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