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ENV_SFV3L
ID   ENV_SFV3L               Reviewed;         982 AA.
AC   P27399;
DT   01-AUG-1992, integrated into UniProtKB/Swiss-Prot.
DT   01-AUG-1992, sequence version 1.
DT   03-AUG-2022, entry version 84.
DE   RecName: Full=Envelope glycoprotein gp130;
DE   AltName: Full=Env polyprotein;
DE   Contains:
DE     RecName: Full=Leader peptide;
DE              Short=LP;
DE     AltName: Full=Env leader protein;
DE              Short=Elp;
DE     AltName: Full=gp18LP;
DE   Contains:
DE     RecName: Full=Surface protein;
DE              Short=SU;
DE     AltName: Full=Glycoprotein 80;
DE              Short=gp80;
DE   Contains:
DE     RecName: Full=Transmembrane protein;
DE              Short=TM;
DE     AltName: Full=Glycoprotein 48;
DE              Short=gp48;
GN   Name=env;
OS   Simian foamy virus type 3 (strain LK3) (SFVagm) (SFV-3).
OC   Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes;
OC   Ortervirales; Retroviridae; Spumaretrovirinae; Spumavirus.
OX   NCBI_TaxID=11644;
OH   NCBI_TaxID=9534; Chlorocebus aethiops (Green monkey) (Cercopithecus aethiops).
OH   NCBI_TaxID=9606; Homo sapiens (Human).
RN   [1]
RP   NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX   PubMed=1310187; DOI=10.1016/0042-6822(92)90026-l;
RA   Renne R., Friedl E., Schweizer M., Fleps U., Turek R., Neumann-Haefelin D.;
RT   "Genomic organization and expression of simian foamy virus type 3 (SFV-
RT   3).";
RL   Virology 186:597-608(1992).
CC   -!- FUNCTION: The surface protein (SU) attaches the virus to the host cell
CC       by binding to the cell receptor. This interaction triggers the
CC       refolding of TM and is thought to activate its fusogenic potential by
CC       unmasking its fusion peptide (By similarity). {ECO:0000250}.
CC   -!- FUNCTION: The transmembrane protein (TM) acts as a class I viral fusion
CC       protein. Under the current model, the protein has at least 3
CC       conformational states: pre-fusion native state, pre-hairpin
CC       intermediate state, and post-fusion hairpin state. During viral and
CC       target cell membrane fusion, the coiled coil regions (heptad repeats)
CC       assume a trimer-of-hairpins structure, positioning the fusion peptide
CC       in close proximity to the C-terminal region of the ectodomain. The
CC       formation of this structure appears to drive apposition and subsequent
CC       fusion of viral and target cell membranes. Membranes fusion leads to
CC       delivery of the nucleocapsid into the cytoplasm (By similarity).
CC       {ECO:0000250}.
CC   -!- FUNCTION: The leader peptide is a component of released, infectious
CC       virions and is required for particle budding. {ECO:0000250}.
CC   -!- SUBUNIT: The mature envelope protein consists of a trimer of SU-TM
CC       heterodimers. The N-terminus of leader peptide specifically interacts
CC       with Gag protein. This specific interaction between Gag protein and Env
CC       glycoprotein may allow particle egress (By similarity). {ECO:0000250}.
CC   -!- SUBCELLULAR LOCATION: [Envelope glycoprotein gp130]: Host endoplasmic
CC       reticulum membrane. Note=The polyprotein has a highly unusual
CC       biosynthesis for a retroviral glycoprotein. It is translated as a full-
CC       length precursor protein into the rough endoplasmic reticulum and
CC       initially has a type III protein configuration with both its N and C-
CC       termini located intracytoplasmically (By similarity). {ECO:0000250}.
CC   -!- SUBCELLULAR LOCATION: [Leader peptide]: Virion membrane {ECO:0000250};
CC       Single-pass type II membrane protein {ECO:0000250}. Host endoplasmic
CC       reticulum membrane {ECO:0000250}; Single-pass type II membrane protein
CC       {ECO:0000250}. Note=Its N-terminus is located inside the viral
CC       particle. {ECO:0000250}.
CC   -!- SUBCELLULAR LOCATION: [Transmembrane protein]: Virion membrane
CC       {ECO:0000250}; Single-pass type I membrane protein {ECO:0000250}. Host
CC       endoplasmic reticulum membrane {ECO:0000250}; Single-pass type I
CC       membrane protein {ECO:0000250}.
CC   -!- SUBCELLULAR LOCATION: [Surface protein]: Virion membrane {ECO:0000250};
CC       Peripheral membrane protein {ECO:0000250}. Host endoplasmic reticulum
CC       membrane {ECO:0000250}; Peripheral membrane protein {ECO:0000250}.
CC       Note=The surface protein is not anchored to the viral envelope, but
CC       associates with the extravirion surface through its binding to TM.
CC       {ECO:0000250}.
CC   -!- DOMAIN: The ER retention signal plays an important role in establishing
CC       the intracellular site of budding. {ECO:0000250}.
CC   -!- PTM: Envelope glycoproteins are synthesized as an inactive precursor
CC       that is processed by host furin or a furin-like protease to yield a
CC       functional hetero-oligomeric complex. {ECO:0000250}.
CC   -!- PTM: The transmembrane protein and the surface protein are N-
CC       glycosylated. {ECO:0000250}.
CC   -!- PTM: Mono- and polyubiquitinated leader peptide are found in viral
CC       particles. Ubiquitination may be involved in regulating the balance
CC       between viral and subviral particles release (By similarity).
CC       {ECO:0000250}.
CC   -!- MISCELLANEOUS: Foamy viruses are distinct from other retroviruses in
CC       many respects. Their protease is active as an uncleaved Pro-Pol
CC       protein. Mature particles do not include the usual processed retroviral
CC       structural protein (MA, CA and NC), but instead contain two large Gag
CC       proteins. Their functional nucleic acid appears to be either RNA or
CC       dsDNA (up to 20% of extracellular particles), because they probably
CC       proceed either to an early (before integration) or late reverse
CC       transcription (after assembly). Foamy viruses have the ability to
CC       retrotranspose intracellularly with high efficiency. They bud
CC       predominantly into the endoplasmic reticulum (ER) and occasionally at
CC       the plasma membrane. Budding requires the presence of Env proteins.
CC       Most viral particles probably remain within the infected cell.
CC   -!- SEQUENCE CAUTION:
CC       Sequence=AAA47798.1; Type=Erroneous initiation; Evidence={ECO:0000305};
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DR   EMBL; M74895; AAA47798.1; ALT_INIT; Genomic_DNA.
DR   RefSeq; YP_001956723.2; NC_010820.1.
DR   GeneID; 6386653; -.
DR   KEGG; vg:6386653; -.
DR   Proteomes; UP000007217; Genome.
DR   GO; GO:0044167; C:host cell endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   GO; GO:0019031; C:viral envelope; IEA:UniProtKB-KW.
DR   GO; GO:0055036; C:virion membrane; IEA:UniProtKB-SubCell.
DR   InterPro; IPR005070; Foamy_env.
DR   Pfam; PF03408; Foamy_virus_ENV; 1.
PE   3: Inferred from homology;
KW   Cleavage on pair of basic residues; Glycoprotein;
KW   Host endoplasmic reticulum; Host membrane; Isopeptide bond; Membrane;
KW   Reference proteome; Signal-anchor; Transmembrane; Transmembrane helix;
KW   Ubl conjugation; Viral envelope protein; Virion.
FT   CHAIN           1..982
FT                   /note="Envelope glycoprotein gp130"
FT                   /id="PRO_0000125470"
FT   CHAIN           1..126
FT                   /note="Leader peptide"
FT                   /evidence="ECO:0000250"
FT                   /id="PRO_0000245434"
FT   CHAIN           127..566
FT                   /note="Surface protein"
FT                   /evidence="ECO:0000250"
FT                   /id="PRO_0000245435"
FT   CHAIN           567..982
FT                   /note="Transmembrane protein"
FT                   /evidence="ECO:0000250"
FT                   /id="PRO_0000245436"
FT   TOPO_DOM        1..65
FT                   /note="Cytoplasmic"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        66..88
FT                   /note="Helical; Signal-anchor for type III membrane
FT                   protein"
FT                   /evidence="ECO:0000255"
FT   TOPO_DOM        89..954
FT                   /note="Lumenal"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        955..975
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TOPO_DOM        976..982
FT                   /note="Cytoplasmic"
FT                   /evidence="ECO:0000255"
FT   REGION          1..15
FT                   /note="Involved in virion budding"
FT                   /evidence="ECO:0000255"
FT   REGION          570..592
FT                   /note="Fusion peptide"
FT                   /evidence="ECO:0000250"
FT   MOTIF           978..980
FT                   /note="Endoplasmic reticulum retention signal"
FT                   /evidence="ECO:0000250"
FT   SITE            126..127
FT                   /note="Cleavage; by host"
FT                   /evidence="ECO:0000250"
FT   SITE            566..567
FT                   /note="Cleavage; by host"
FT   CARBOHYD        109
FT                   /note="N-linked (GlcNAc...) asparagine; by host"
FT                   /evidence="ECO:0000255"
FT   CARBOHYD        141
FT                   /note="N-linked (GlcNAc...) asparagine; by host"
FT                   /evidence="ECO:0000255"
FT   CARBOHYD        183
FT                   /note="N-linked (GlcNAc...) asparagine; by host"
FT                   /evidence="ECO:0000255"
FT   CARBOHYD        309
FT                   /note="N-linked (GlcNAc...) asparagine; by host"
FT                   /evidence="ECO:0000255"
FT   CARBOHYD        346
FT                   /note="N-linked (GlcNAc...) asparagine; by host"
FT                   /evidence="ECO:0000255"
FT   CARBOHYD        390
FT                   /note="N-linked (GlcNAc...) asparagine; by host"
FT                   /evidence="ECO:0000255"
FT   CARBOHYD        404
FT                   /note="N-linked (GlcNAc...) asparagine; by host"
FT                   /evidence="ECO:0000255"
FT   CARBOHYD        412
FT                   /note="N-linked (GlcNAc...) asparagine; by host"
FT                   /evidence="ECO:0000255"
FT   CARBOHYD        484
FT                   /note="N-linked (GlcNAc...) asparagine; by host"
FT                   /evidence="ECO:0000255"
FT   CARBOHYD        522
FT                   /note="N-linked (GlcNAc...) asparagine; by host"
FT                   /evidence="ECO:0000255"
FT   CARBOHYD        551
FT                   /note="N-linked (GlcNAc...) asparagine; by host"
FT                   /evidence="ECO:0000255"
FT   CARBOHYD        776
FT                   /note="N-linked (GlcNAc...) asparagine; by host"
FT                   /evidence="ECO:0000255"
FT   CARBOHYD        802
FT                   /note="N-linked (GlcNAc...) asparagine; by host"
FT                   /evidence="ECO:0000255"
FT   CARBOHYD        827
FT                   /note="N-linked (GlcNAc...) asparagine; by host"
FT                   /evidence="ECO:0000255"
FT   CROSSLNK        14
FT                   /note="Glycyl lysine isopeptide (Lys-Gly) (interchain with
FT                   G-Cter in ubiquitin)"
FT                   /evidence="ECO:0000250"
FT   CROSSLNK        15
FT                   /note="Glycyl lysine isopeptide (Lys-Gly) (interchain with
FT                   G-Cter in ubiquitin)"
FT                   /evidence="ECO:0000250"
FT   CROSSLNK        34
FT                   /note="Glycyl lysine isopeptide (Lys-Gly) (interchain with
FT                   G-Cter in ubiquitin)"
FT                   /evidence="ECO:0000250"
SQ   SEQUENCE   982 AA;  113314 MW;  721F2F8929D604FF CRC64;
     MAPPMNLQQW LLWKKMNETH LALENISSLT EEQKQQVIIE IQQEEVIPTR MDRVKYLAYA
     CCATSTRVMC WLFLICVLLI IVFVSCFVTV ARIQWNRDIN VFGPVIDWNV THQATYQQLK
     AARLTRSLKV EHPHISYISI NMSSIPQGVM YTPHPEPIIL KERVLGISQV LMINSENIAN
     VANLSQETKV LLTDMINEEL QDLSNQMIDF ELPLGDPRDQ DQYIHHKCYQ EFAHCYLVKY
     KKPSPWISEG IIVDQCPLPR IHDPNYYKYQ PIWDYYLKIQ NIRPQGWTSK SYYGTARMGS
     FYIPTFLRNN TVSHVLFCSD QLYGKWYNIE NNIQENEQLL KTKLYNLTTY SKLKARALPK
     EWNNQGNARL FRSFNPLDVC NRPEAVLLLN TTYFTYSLWE GDCNYTTALI QNLTECRQPD
     RLKLKHPYAC RFWRYKEGQE EVKCLGNEKK KCLYYSEYSS PEAQFDFGFL SYLNAFPGLK
     YIENQTVREP EYEVYSLYME CMNSAEKYGI DSVLFALKTF LNFTGTPVNE MSTARAFVGL
     TDPKFPPTYP NITKEQKRCN NLKRRKRSTN IEKLRSMGYS LTGAVQTLSQ ISDINDERLQ
     QGVSLLRDHV VTLMEAALHD ITIMEGMLAI QHVHTHLNHL KTILLMRKID WTFIKSNWIK
     EQLQKTEDEM KIIRRTAKSL VYYVTQTSSS TTATSWEIGI YYEITIPKHI YLNNWQVINI
     GHLVESAGHL TLIRVKHPYE VINKECTYEQ YLHLEDCISQ DYVICDTVQI VSPCGNSTTT
     SDCPVTAEKV KEPYVQVSAL KNGSYLVLTS RTDCSIPAYV PSIVTVNETV KCFGVEFHKP
     LYSESKVSFE PQVPHLKLRL PHLVGIIANL QNLEIEVTST QESIKDQIER AKSQLLRLDI
     HEGDFPAWIQ QLASATRDVW PAAARALQGI GNVLSNTAQG IFGTTVSILS YAKPILIGIG
     VILLIAFLFK IVSWLPGKKK RN
 
 
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